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MW735835.1__QTH80469.1__PA10_00271__00269

Bact-Vir

MW735835.1__QTH80469.1__PA10_00271__00269

Identity

Accession:
MW735835 ↗
Kingdom:
phage

Quality

66.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_pPa_SNUABM_DT01

TaxID: 2820398

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-121
PDB
Domain cluster: rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00670__D5-100
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.84 70.0 7.30e-01 98.3% 95.3%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.71 62.0 6.20e-01 95.7% 92.3%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 37.0 4.81e-01 80.0% 100.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.65 39.0 4.72e-01 83.5% 98.5%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 32.0 4.10e-01 71.3% 84.8%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 39.0 4.56e-01 85.2% 86.7%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.62 38.0 4.11e-01 86.1% 73.7%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 35.0 4.16e-01 74.8% 89.3%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 34.0 3.96e-01 86.1% 81.2%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.53 34.0 2.41e-01 77.4% 23.4%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
605 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.84 70.0 7.30e-01 98.3% 95.3%
4282868 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 44.0 5.42e-01 81.7% 95.7%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 40.0 4.66e-01 85.2% 74.1%
3281945 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 45.0 4.99e-01 81.7% 80.0%
165392 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.72 64.0 6.34e-01 99.1% 91.7%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 43.0 5.17e-01 81.7% 93.2%
4087011 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 45.0 4.93e-01 81.7% 80.0%
4547801 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 40.0 4.47e-01 84.3% 73.3%
3978997 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.66 44.0 4.77e-01 87.8% 82.1%
3942912 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.66 41.0 4.61e-01 81.7% 83.5%
3972550 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.65 42.0 4.51e-01 87.0% 76.0%
4973804 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 32.0 3.85e-01 75.7% 74.7%
3942998 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.61 34.0 4.18e-01 80.9% 88.6%
4674170 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.59 41.0 4.07e-01 87.0% 67.5%
3495619 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.55 33.0 3.38e-01 73.9% 60.9%
4388548 4246.1.1.2 ↗ a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 0.53 34.0 2.28e-01 75.7% 14.8%
4461494 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.53 30.0 3.74e-01 71.3% 96.9%
3214387 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 36.0 4.01e-01 80.9% 87.8%
4647043 304.169.1.3 ↗ a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WCX 0.53 31.0 3.65e-01 73.9% 86.7%
5011764 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.52 33.0 3.76e-01 74.8% 88.7%
4089149 304.8.1.24 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF2129 0.51 31.0 3.57e-01 71.3% 90.7%
4986577 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.50 33.0 3.39e-01 74.8% 69.1%