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MW735835.1__QTH80496.1__PA10_00298__00296

Bact-Vir

MW735835.1__QTH80496.1__PA10_00298__00296

Identity

Accession:
MW735835 ↗
Kingdom:
phage

Quality

61.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 72-133
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 62.0 6.10e-01 100.0% 74.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.83 59.0 4.96e-01 100.0% 45.6%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 51.0 5.65e-01 98.4% 81.2%
2da4A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 62.0 6.08e-01 100.0% 75.8%
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.78 54.0 4.63e-01 85.5% 46.9%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.76 53.0 5.28e-01 90.3% 71.4%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 52.0 5.76e-01 96.8% 93.6%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 46.0 4.80e-01 75.8% 67.2%
1wh5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 55.0 5.09e-01 98.4% 62.5%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.74 61.0 4.72e-01 100.0% 42.1%
4edgA03 1.20.50.20 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle 0.72 47.0 4.76e-01 83.9% 68.3%
3lsgA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 44.0 4.83e-01 90.3% 83.3%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.69 56.0 4.59e-01 100.0% 49.1%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 4.67e-01 100.0% 68.8%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 55.0 4.63e-01 100.0% 51.9%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.43e-01 98.4% 59.0%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 48.0 4.72e-01 100.0% 70.6%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 47.0 5.31e-01 96.8% 100.0%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.66 47.0 4.23e-01 96.8% 53.3%
4a18Q01 1.10.10.1760 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 0.65 50.0 4.88e-01 98.4% 76.8%
2au3A04 1.20.50.30 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › 0.65 43.0 4.53e-01 90.3% 78.2%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 49.0 4.86e-01 100.0% 77.6%
3fblA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 53.0 4.88e-01 93.5% 70.7%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 43.0 4.15e-01 71.0% 87.3%
1di1A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.63 49.0 3.24e-01 88.7% 33.8%
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 54.0 5.18e-01 100.0% 86.1%
1j6oA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.63 55.0 3.60e-01 100.0% 23.1%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.62 46.0 4.02e-01 100.0% 52.0%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 52.0 4.74e-01 93.5% 85.4%
1iqcA02 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.61 51.0 3.95e-01 100.0% 85.7%
4uqxA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 38.0 3.35e-01 79.0% 44.9%
2vz8A03 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.60 48.0 3.03e-01 88.7% 35.7%
2el7A02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.59 44.0 3.91e-01 82.3% 90.4%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.59 54.0 4.92e-01 98.4% 84.8%
2i6hA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 38.0 3.30e-01 83.9% 42.7%
2p5tA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.58 39.0 3.44e-01 85.5% 46.7%
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.56 42.0 4.31e-01 93.5% 84.5%
1qdmA03 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.56 44.0 4.16e-01 100.0% 72.7%
4gtnA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.55 39.0 3.74e-01 80.6% 63.5%
1tuoA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.55 44.0 3.64e-01 88.7% 90.6%
2odmA00 1.10.287.750 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like 0.55 43.0 4.02e-01 88.7% 86.1%
4ga6A02 1.20.970.50 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › 0.54 39.0 3.01e-01 79.0% 51.3%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 41.0 4.05e-01 82.3% 81.5%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.53 44.0 3.89e-01 98.4% 67.0%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 40.0 3.40e-01 85.5% 100.0%
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 36.0 3.72e-01 83.9% 76.3%
2bl7A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.52 39.0 3.69e-01 83.9% 69.6%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.52 35.0 3.63e-01 72.6% 75.9%
2yevC00 6.10.280.110 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 36.0 3.59e-01 72.6% 77.8%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.51 36.0 3.46e-01 75.8% 75.7%
3ed5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.50 41.0 3.86e-01 98.4% 84.5%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3327057 101.1.1.298 alpha arrays › HTH › HTH › Three-helical HTH › DUF7645 0.83 62.0 6.30e-01 100.0% 81.7%
4093017 4973.1.1.1 alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind 0.78 59.0 5.59e-01 100.0% 68.0%
4288489 4973.1.1.2 alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaG_cat_HB 0.77 59.0 5.56e-01 100.0% 68.0%
3924925 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.77 70.0 5.62e-01 100.0% 57.4%
3778380 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 60.0 5.82e-01 100.0% 77.1%
4591310 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.75 52.0 5.00e-01 96.8% 64.3%
4501770 101.1.1.217 alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.74 51.0 5.78e-01 93.5% 100.0%
3575981 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.74 68.0 6.21e-01 100.0% 95.0%
3492714 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.74 57.0 4.12e-01 100.0% 29.4%
3947236 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.73 51.0 5.40e-01 96.8% 83.3%
3269226 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.73 63.0 5.96e-01 100.0% 80.0%
3283005 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.73 50.0 5.30e-01 96.8% 81.8%
3300593 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 57.0 6.00e-01 100.0% 96.4%
4465858 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 48.0 5.20e-01 93.5% 86.0%
4250792 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.71 57.0 4.21e-01 95.2% 32.9%
3979666 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 47.0 4.81e-01 91.9% 71.7%
4145808 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.70 61.0 6.01e-01 98.4% 100.0%
3969487 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 47.0 5.10e-01 93.5% 87.8%
3974554 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 43.0 4.72e-01 90.3% 78.0%
3999776 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.69 58.0 4.68e-01 98.4% 48.0%
4031352 6026.1.1.43 alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › DUF1024 0.69 47.0 4.18e-01 72.6% 52.4%
1320273 101.1.10.11 alpha arrays › HTH › HTH › Cyclin-like › Herp-Cyclin 0.68 55.0 4.60e-01 100.0% 50.5%
3988160 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.68 44.0 4.47e-01 91.9% 68.3%
3984092 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.68 46.0 4.44e-01 95.2% 62.9%
3272819 3919.1.1.2 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.68 58.0 4.83e-01 100.0% 54.5%
4031085 3826.1.1.79 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF1024 0.68 46.0 4.25e-01 72.6% 56.4%
3973678 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 45.0 4.70e-01 91.9% 78.2%
4990327 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 46.0 4.21e-01 100.0% 54.1%
3736407 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.66 46.0 4.31e-01 72.6% 62.7%
4048642 101.1.1.304 alpha arrays › HTH › HTH › Three-helical HTH › GatB_Yqey 0.65 53.0 5.34e-01 95.2% 93.7%
3677615 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.63 54.0 3.49e-01 100.0% 19.8%
3652773 5059.1.1.0 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.61 52.0 3.60e-01 100.0% 26.4%
4567840 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.59 46.0 4.83e-01 95.2% 98.2%
3520762 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 39.0 2.72e-01 77.4% 20.0%
3999314 5058.1.1.35 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › EMC6 0.58 52.0 4.80e-01 95.2% 96.0%
3795237 4207.1.2.0 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region 0.56 47.0 3.90e-01 96.8% 56.5%
4556778 3919.1.1.2 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.56 47.0 3.95e-01 100.0% 55.7%
3619435 192.8.1.36 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain 0.55 38.0 3.31e-01 72.6% 76.8%
4027157 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.55 46.0 3.03e-01 98.4% 26.0%
3183113 101.1.11.111 alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF3818 0.53 41.0 3.23e-01 85.5% 83.0%
3580280 604.1.1.192 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26998 0.53 41.0 3.61e-01 87.1% 80.0%
3919832 109.4.1.1651 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_EMC2 0.52 38.0 2.85e-01 83.9% 30.3%
3252200 603.1.1.6 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.52 39.0 2.93e-01 80.6% 47.5%
4995204 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.52 35.0 3.40e-01 72.6% 61.4%
3603382 159.1.2.0 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related 0.52 44.0 3.22e-01 100.0% 33.5%
4006721 325.1.7.50 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PF25876 0.52 36.0 3.27e-01 72.6% 56.5%
5024299 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.51 42.0 2.94e-01 100.0% 58.8%
5029873 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.50 35.0 3.26e-01 72.6% 76.2%