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MW749006.1__QXN70485.1__AGENTSMITH_81__00079
Bact-VirMW749006.1__QXN70485.1__AGENTSMITH_81__00079
Identity
- Accession:
- MW749006 ↗
- Kingdom:
- phage
Quality
49.1
mean pLDDT
Taxonomy
TaxID: 2836110
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 473-532
D2
high
residues 535-641
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zkrB00 | 1.20.920.50 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.60 | 52.0 | 4.78e-01 | 99.1% | 94.5% |
| 4e40A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.60 | 48.0 | 3.77e-01 | 89.7% | 76.3% |
| 6h5hA00 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.59 | 38.0 | 4.49e-01 | 96.3% | 98.6% |
| 2kp7A01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.58 | 37.0 | 4.29e-01 | 91.6% | 93.2% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.57 | 37.0 | 3.59e-01 | 90.7% | 58.8% |
| 3hx0K01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.57 | 40.0 | 4.45e-01 | 93.5% | 95.2% |
| 1jqkA03 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 38.0 | 3.26e-01 | 88.8% | 41.1% |
| 3mgxB00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.56 | 46.0 | 3.20e-01 | 90.7% | 56.8% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 42.0 | 4.04e-01 | 93.5% | 71.9% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 34.0 | 3.44e-01 | 99.1% | 60.7% |
| 1cipA02 | 1.10.400.10 | Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like | 0.54 | 38.0 | 3.68e-01 | 72.9% | 87.4% |
| 1rcwB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.54 | 46.0 | 3.76e-01 | 98.1% | 78.0% |
| 3qsgA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.53 | 32.0 | 3.15e-01 | 72.0% | 52.2% |
| 1l3pA00 | 1.20.120.320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Group V grass pollen allergen | 0.53 | 35.0 | 3.58e-01 | 84.1% | 68.6% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.52 | 46.0 | 4.38e-01 | 98.1% | 85.9% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.52 | 34.0 | 3.30e-01 | 77.6% | 57.1% |
| 2yzsA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.52 | 43.0 | 3.43e-01 | 91.6% | 53.9% |
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 46.0 | 3.53e-01 | 100.0% | 67.2% |
| 3ug9A02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 45.0 | 3.60e-01 | 100.0% | 67.6% |
| 1eb6A00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 43.0 | 3.73e-01 | 95.3% | 97.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027714 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.65 | 45.0 | 4.49e-01 | 100.0% | 69.1% |
| 5045625 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.64 | 57.0 | 3.84e-01 | 100.0% | 32.0% |
| 3461725 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.62 | 45.0 | 4.36e-01 | 100.0% | 66.7% |
| 4946655 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 56.0 | 3.73e-01 | 100.0% | 32.3% |
| 3816910 | 174.1.1.58 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NEPRO_N | 0.59 | 42.0 | 3.51e-01 | 73.8% | 93.7% |
| 3419359 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.57 | 40.0 | 3.79e-01 | 73.8% | 96.3% |
| 3575903 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.56 | 39.0 | 3.29e-01 | 72.0% | 93.2% |
| 4958052 | 1079.1.1.5 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD_2 | 0.55 | 40.0 | 3.23e-01 | 77.6% | 80.9% |
| 4020948 | 611.9.1.0 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain | 0.55 | 37.0 | 3.63e-01 | 89.7% | 64.3% |
| 4946986 | 101.1.1.19 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB | 0.54 | 45.0 | 4.46e-01 | 93.5% | 87.0% |
| 4627506 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.54 | 37.0 | 3.88e-01 | 94.4% | 80.0% |
| 3214822 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.54 | 48.0 | 3.48e-01 | 100.0% | 62.3% |
| 3612403 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.53 | 45.0 | 4.08e-01 | 100.0% | 67.6% |
| 5011373 | 2004.1.1.342 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_10 | 0.53 | 48.0 | 3.31e-01 | 100.0% | 31.1% |
| 3170301 | 5059.1.1.5 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA | 0.52 | 43.0 | 3.11e-01 | 91.6% | 70.6% |
| 56635 | 150.2.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Cobalamin adenosyltransferase › Cobalamin adenosyltransferase | 0.52 | 42.0 | 3.74e-01 | 86.9% | 84.0% |
| 3980116 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.52 | 36.0 | 3.63e-01 | 93.5% | 70.9% |
| 4004414 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.51 | 36.0 | 3.63e-01 | 93.5% | 70.9% |
D3
high
residues 653-817
D4
medium
residues 194-264
D5
medium
residues 374-438
D6
medium
residues 841-910_925-960
D7
medium
residues 911-924_961-1041