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MW749006.1__QXN70497.1__AGENTSMITH_93__00091
Bact-VirMW749006.1__QXN70497.1__AGENTSMITH_93__00091
Identity
- Accession:
- MW749006 ↗
- Kingdom:
- phage
Quality
82.1
mean pLDDT
Taxonomy
TaxID: 2836110
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 127-205
Domain cluster:
rep: MW749006.1__QXN70598.1__AGENTSMITH_194__00192__D51-136
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13475.12 best | DUF4116 | 31.7 | 1.20e-07 | 55.7% | 89.8% |
| PF13475.12 | DUF4116 | 27.8 | 2.00e-06 | 54.4% | 83.7% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6idxA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.62 | 53.0 | 3.97e-01 | 100.0% | 59.8% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.62 | 48.0 | 4.08e-01 | 86.1% | 65.0% |
| 1rz4A01 | 1.25.40.250 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 | 0.61 | 52.0 | 4.63e-01 | 98.7% | 89.2% |
| 4c9bB00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 49.0 | 3.40e-01 | 88.6% | 73.6% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 41.0 | 3.76e-01 | 70.9% | 89.3% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.59 | 50.0 | 4.12e-01 | 98.7% | 81.2% |
| 1e6vA03 | 1.20.840.10 | Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal | 0.58 | 40.0 | 2.96e-01 | 72.2% | 49.1% |
| 5z62E00 | 1.25.40.40 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI | 0.55 | 46.0 | 4.23e-01 | 96.2% | 89.0% |
| 3pasA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 37.0 | 2.89e-01 | 72.2% | 77.4% |
| 3vouB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 32.0 | 2.68e-01 | 74.7% | 33.1% |
| 3he0B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 36.0 | 2.87e-01 | 75.9% | 74.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3510805 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 63.0 | 5.22e-01 | 100.0% | 96.6% |
| 3324480 | 109.4.1.1242 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_RRP12_N | 0.70 | 60.0 | 3.78e-01 | 100.0% | 34.6% |
| 3751072 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.67 | 59.0 | 4.11e-01 | 100.0% | 52.6% |
| 3257267 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 51.0 | 3.66e-01 | 89.9% | 62.6% |
| 3608662 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 33.0 | 3.26e-01 | 73.4% | 45.9% |
| 1181999 | 109.4.1.1363 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, TPR_IMB1 | 0.61 | 52.0 | 4.22e-01 | 100.0% | 86.2% |
| 3719494 | 109.4.1.588 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FPL | 0.60 | 50.0 | 3.83e-01 | 96.2% | 73.7% |
| 3720986 | 109.4.1.955 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EF3_GNC1 | 0.60 | 47.0 | 4.01e-01 | 87.3% | 77.8% |
| 3800571 | 109.4.1.285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PSMD12-CSN4_N | 0.56 | 47.0 | 3.22e-01 | 100.0% | 37.0% |
| 3175191 | 627.1.1.1 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 | 0.53 | 37.0 | 2.98e-01 | 73.4% | 54.1% |
| 4146099 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.52 | 36.0 | 3.45e-01 | 73.4% | 81.1% |
D2
medium
residues 3-104
Domain cluster:
rep: MF403008.1__AUZ95146.1__X__00387__D1-95
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4atgA00 | 1.25.40.770 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAF6, C-terminal HEAT repeat domain | 0.71 | 64.0 | 5.18e-01 | 100.0% | 87.2% |
| 3rk6A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.70 | 63.0 | 4.94e-01 | 100.0% | 96.3% |
| 2qk1A01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.69 | 61.0 | 4.73e-01 | 100.0% | 77.8% |
| 4j8sA00 | 1.25.40.840 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain | 0.65 | 51.0 | 4.27e-01 | 85.3% | 83.3% |
| 6a2aA01 | 1.50.10.130 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain | 0.56 | 47.0 | 3.83e-01 | 94.1% | 63.1% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.54 | 45.0 | 3.98e-01 | 93.1% | 79.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 150811 | 109.4.1.93 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAF6_C | 0.71 | 64.0 | 5.18e-01 | 100.0% | 87.2% |
| 3306963 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 55.0 | 3.92e-01 | 98.0% | 62.4% |
| 3408104 | 109.4.1.942 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NOT1_connector | 0.63 | 54.0 | 4.37e-01 | 97.1% | 92.7% |
| 4551982 | 109.2.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Terpene_synth | 0.58 | 44.0 | 3.62e-01 | 80.4% | 75.3% |
| 3751072 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.56 | 46.0 | 3.43e-01 | 91.2% | 89.9% |
| 3559741 | 109.4.1.590 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NopRA1 | 0.55 | 47.0 | 3.88e-01 | 98.0% | 88.5% |
| 1146575 | 109.39.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › transcription anti-terminator antagonist UpxZ › transcription anti-terminator antagonist UpxZ › UpxZ | 0.54 | 45.0 | 3.98e-01 | 93.1% | 79.9% |
| 4486870 | 3352.1.1.21 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DIE2_ALG10 | 0.50 | 42.0 | 2.71e-01 | 92.2% | 80.3% |