Back to structures

MW749006.1__QXN70584.1__AGENTSMITH_180__00178

Bact-Vir

MW749006.1__QXN70584.1__AGENTSMITH_180__00178

Identity

Accession:
MW749006 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-63
PDB
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF13560.13 best HTH_31 41.8 1.50e-10 98.4% 90.6%
PF12844.14 HTH_19 37.0 3.60e-09 98.4% 90.6%
PF13443.13 HTH_26 26.0 1.20e-05 95.1% 87.3%
PF01381.29 HTH_3 40.5 3.00e-10 91.8% 100.0%
D2 medium residues 72-116
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d8bA00 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.56 39.0 3.37e-01 77.8% 46.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3173131 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.74 55.0 3.91e-01 82.2% 28.1%