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MW749006.1__QXN70613.1__AGENTSMITH_209__00207
Bact-VirMW749006.1__QXN70613.1__AGENTSMITH_209__00207
Identity
- Accession:
- MW749006 ↗
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Taxonomy
TaxID: 2836110
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-88
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 46.0 | 3.57e-01 | 81.8% | 31.9% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.64 | 45.0 | 4.13e-01 | 71.6% | 100.0% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.63 | 44.0 | 3.08e-01 | 71.6% | 25.2% |
| 4nuuB02 | 1.20.58.830 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 52.0 | 4.65e-01 | 92.0% | 65.9% |
| 3ppuB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 34.0 | 3.12e-01 | 88.6% | 44.2% |
| 8fbcA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.56 | 46.0 | 3.00e-01 | 88.6% | 67.8% |
| 3fb2A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 39.0 | 3.78e-01 | 92.0% | 63.8% |
| 3nv6A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 43.0 | 2.85e-01 | 93.2% | 63.4% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 42.0 | 3.40e-01 | 85.2% | 67.1% |
| 3kdqA00 | 6.10.320.10 | Special › Helix non-globular › Ferritin › | 0.50 | 41.0 | 3.40e-01 | 89.8% | 50.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3530636 | 192.29.1.103 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › TADA2A-like_3rd | 0.72 | 39.0 | 4.04e-01 | 75.0% | 55.3% |
| 3622874 | 109.4.1.2473 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16, ARM_TT21, ARM_TT21_2nd, ARM_TT21_C, ARM_TT21_5th, ARM_TT21_4th | 0.71 | 48.0 | 2.76e-01 | 70.5% | 15.8% |
| 5064040 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 47.0 | 3.49e-01 | 70.5% | 58.0% |
| 4994469 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.67 | 47.0 | 3.69e-01 | 73.9% | 63.9% |
| 3192503 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.65 | 44.0 | 4.26e-01 | 70.5% | 64.0% |
| 5026250 | 3755.3.1.305 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Rad50_zn_hook | 0.63 | 47.0 | 3.66e-01 | 78.4% | 92.6% |
| 5074716 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.61 | 44.0 | 3.99e-01 | 87.5% | 55.8% |
| 3415660 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.60 | 53.0 | 3.94e-01 | 95.5% | 86.2% |
| 4311026 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.59 | 36.0 | 3.22e-01 | 75.0% | 43.2% |
| 4024251 | 4984.1.1.0 ↗ | alpha bundles › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain | 0.58 | 49.0 | 4.45e-01 | 95.5% | 68.3% |
| 4164698 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.57 | 35.0 | 3.27e-01 | 73.9% | 48.2% |
| 3169048 | 109.4.1.1124 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_ANAPC2 | 0.56 | 40.0 | 2.69e-01 | 75.0% | 46.6% |
| 3643155 | 603.1.1.2 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Not3 | 0.55 | 44.0 | 4.01e-01 | 92.0% | 63.3% |
| 4527091 | 192.2.1.3 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Rad50_zn_hook | 0.55 | 42.0 | 2.94e-01 | 78.4% | 68.6% |
| 4248927 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.55 | 33.0 | 3.00e-01 | 72.7% | 42.4% |
| 3210155 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.52 | 36.0 | 3.46e-01 | 73.9% | 67.3% |
| 3961186 | 103.9.1.0 ↗ | alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain | 0.52 | 41.0 | 3.97e-01 | 86.4% | 74.0% |
| 4029168 | 4984.1.1.0 ↗ | alpha bundles › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain | 0.51 | 43.0 | 3.81e-01 | 93.2% | 65.4% |