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MW749008.1__QYA57378.1__MIFENG_35__00033
Bact-VirMW749008.1__QYA57378.1__MIFENG_35__00033
Identity
- Accession:
- MW749008 ↗
- Kingdom:
- phage
Quality
79.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-57
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wxfA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.69 | 39.0 | 2.99e-01 | 89.5% | 26.1% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 51.0 | 4.83e-01 | 94.7% | 67.1% |
| 2y3mA02 | 3.30.1370.130 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.65 | 49.0 | 4.94e-01 | 100.0% | 85.7% |
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 56.0 | 4.52e-01 | 100.0% | 58.8% |
| 6le1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 54.0 | 5.14e-01 | 96.5% | 80.9% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.63 | 51.0 | 4.37e-01 | 100.0% | 54.7% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.61 | 47.0 | 3.83e-01 | 100.0% | 42.9% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 48.0 | 4.34e-01 | 94.7% | 71.4% |
| 5wzoA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.59 | 51.0 | 3.99e-01 | 96.5% | 78.0% |
| 7x4oB01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 44.0 | 3.71e-01 | 89.5% | 64.0% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.57 | 43.0 | 4.30e-01 | 87.7% | 91.4% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 46.0 | 3.10e-01 | 100.0% | 77.8% |
| 6i3mE01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.55 | 42.0 | 3.23e-01 | 96.5% | 35.8% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 48.0 | 3.56e-01 | 100.0% | 59.7% |
| 1aoaA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.54 | 41.0 | 3.29e-01 | 84.2% | 97.5% |
| 3bf4A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 44.0 | 3.83e-01 | 100.0% | 63.6% |
| 3mogA03 | 3.30.750.190 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.53 | 42.0 | 3.63e-01 | 89.5% | 70.2% |
| 8alzB06 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 44.0 | 3.08e-01 | 98.2% | 87.3% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 36.0 | 3.08e-01 | 77.2% | 52.4% |
| 6torA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 41.0 | 2.72e-01 | 93.0% | 100.0% |
| 6cgaC02 | 1.20.58.860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 43.0 | 3.91e-01 | 96.5% | 71.8% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4543273 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.72 | 55.0 | 5.37e-01 | 94.7% | 75.4% |
| 4598960 | 304.36.1.0 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like | 0.71 | 55.0 | 5.23e-01 | 96.5% | 71.4% |
| 3575264 | 604.12.1.61 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Clc-like | 0.70 | 46.0 | 3.60e-01 | 96.5% | 33.9% |
| 4985138 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.69 | 56.0 | 5.02e-01 | 93.0% | 72.9% |
| 3964348 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.69 | 55.0 | 5.05e-01 | 94.7% | 66.7% |
| 3230011 | 6106.1.1.0 ↗ | extended segments › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY | 0.69 | 54.0 | 4.75e-01 | 100.0% | 57.6% |
| 4959358 | 304.131.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phosphonoacetate hydrolase insertion domain › Phosphonoacetate hydrolase insertion domain | 0.69 | 54.0 | 4.68e-01 | 89.5% | 56.8% |
| 3630540 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.62 | 51.0 | 3.43e-01 | 100.0% | 21.9% |
| 3606059 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.62 | 52.0 | 3.89e-01 | 96.5% | 49.3% |
| 3324543 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.60 | 52.0 | 3.36e-01 | 100.0% | 21.5% |
| 3872910 | 1105.1.1.1 ↗ | alpha complex topology › Retinol uptake receptor STRA6 › Retinol uptake receptor STRA6 › Retinol uptake receptor STRA6 › RBP_receptor | 0.59 | 49.0 | 2.83e-01 | 94.7% | 23.2% |
| 4027433 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.59 | 47.0 | 4.90e-01 | 89.5% | 100.0% |
| 3941725 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.58 | 46.0 | 4.20e-01 | 94.7% | 64.7% |
| 4628387 | 616.1.1.1 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 | 0.58 | 50.0 | 4.39e-01 | 96.5% | 68.2% |
| 3267186 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.57 | 42.0 | 3.70e-01 | 78.9% | 72.9% |
| 3934720 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 45.0 | 4.11e-01 | 94.7% | 89.4% |
| 3170867 | 3730.1.1.2 ↗ | alpha arrays › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › FMP23 | 0.56 | 45.0 | 3.71e-01 | 96.5% | 47.3% |
| 4021842 | 109.4.1.1553 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28151 | 0.56 | 46.0 | 2.52e-01 | 87.7% | 5.4% |
| 4178636 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.56 | 46.0 | 3.46e-01 | 94.7% | 38.7% |
| 3471523 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.55 | 46.0 | 3.03e-01 | 100.0% | 44.0% |
| 4981980 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 45.0 | 3.55e-01 | 91.2% | 91.3% |
| 3723257 | 5042.1.1.0 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region | 0.54 | 44.0 | 3.91e-01 | 100.0% | 63.5% |
| 4565985 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.53 | 42.0 | 2.52e-01 | 91.2% | 67.2% |
| 4816106 | 3223.1.1.1 ↗ | beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC | 0.53 | 43.0 | 3.97e-01 | 94.7% | 70.5% |
| 4271212 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 46.0 | 3.55e-01 | 96.5% | 75.6% |
| 5035493 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 46.0 | 3.69e-01 | 94.7% | 75.2% |
| 2718745 | 306.3.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 | 0.52 | 39.0 | 3.62e-01 | 96.5% | 60.7% |
| 3681044 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.52 | 35.0 | 2.95e-01 | 78.9% | 41.1% |
| 3176105 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.52 | 47.0 | 2.94e-01 | 98.2% | 45.5% |
| 4457710 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 46.0 | 3.58e-01 | 96.5% | 66.7% |
| 5053794 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.52 | 47.0 | 3.57e-01 | 100.0% | 82.3% |
| 3298201 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 43.0 | 3.99e-01 | 96.5% | 72.9% |
| 3727303 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 46.0 | 2.73e-01 | 100.0% | 80.7% |
| 3180807 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.52 | 43.0 | 3.75e-01 | 94.7% | 86.7% |
| 5014663 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.51 | 43.0 | 2.75e-01 | 100.0% | 87.0% |
| 4259368 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 44.0 | 3.43e-01 | 94.7% | 87.5% |
| 4083451 | 192.2.1.20 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP | 0.51 | 41.0 | 3.70e-01 | 89.5% | 90.0% |
| 3254127 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.51 | 46.0 | 3.21e-01 | 100.0% | 51.7% |
| 3828336 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 45.0 | 3.60e-01 | 100.0% | 63.2% |
| 4020727 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.50 | 43.0 | 3.39e-01 | 98.2% | 44.8% |