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MW760841.1__QVW28585.1__pEaSNUABM8_00088__00075
Bact-VirMW760841.1__QVW28585.1__pEaSNUABM8_00088__00075
Identity
- Accession:
- MW760841 ↗
- Kingdom:
- phage
Quality
80.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Machinavirus›
Erwinia_phage_pEa_SNUABM_8
TaxID: 2831677
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-107
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ub1A01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 39.0 | 3.40e-01 | 70.1% | 77.2% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 39.0 | 3.76e-01 | 71.3% | 80.0% |
| 1dpgA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 34.0 | 2.38e-01 | 95.4% | 17.2% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.55 | 41.0 | 3.43e-01 | 80.5% | 91.0% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 37.0 | 3.20e-01 | 71.3% | 50.7% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 37.0 | 3.48e-01 | 71.3% | 81.2% |
| 3soyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 40.0 | 3.41e-01 | 79.3% | 58.5% |
| 6krwA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 46.0 | 3.26e-01 | 100.0% | 61.3% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 37.0 | 3.43e-01 | 77.0% | 61.5% |
| 1jmxB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 44.0 | 3.03e-01 | 98.9% | 37.8% |
| 2vijA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 36.0 | 3.21e-01 | 74.7% | 86.5% |
| 2carB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.51 | 35.0 | 2.78e-01 | 73.6% | 94.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3279068 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 42.0 | 3.90e-01 | 71.3% | 69.1% |
| 4988603 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.59 | 42.0 | 2.94e-01 | 75.9% | 87.2% |
| 4965879 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.58 | 46.0 | 3.64e-01 | 87.4% | 45.4% |
| 3927710 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 41.0 | 3.32e-01 | 77.0% | 43.6% |
| 4973777 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.55 | 44.0 | 3.74e-01 | 87.4% | 75.8% |
| 3731118 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 49.0 | 3.66e-01 | 100.0% | 95.6% |
| 3596629 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 37.0 | 3.15e-01 | 71.3% | 68.7% |
| 3468401 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 37.0 | 3.70e-01 | 71.3% | 83.3% |
| 3226630 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.54 | 42.0 | 3.51e-01 | 86.2% | 80.0% |
| 3953532 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 44.0 | 3.62e-01 | 89.7% | 85.0% |
| 4047115 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.54 | 37.0 | 3.52e-01 | 70.1% | 76.0% |
| 3056279 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.53 | 39.0 | 3.27e-01 | 79.3% | 79.1% |
| 3611898 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 38.0 | 3.38e-01 | 73.6% | 80.8% |
| 3238606 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 38.0 | 3.48e-01 | 75.9% | 67.0% |
| 3716709 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 39.0 | 3.45e-01 | 78.2% | 63.4% |
| 3805678 | 3459.1.1.3 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 | 0.52 | 42.0 | 3.93e-01 | 90.8% | 87.0% |
| 3581299 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.52 | 38.0 | 2.80e-01 | 75.9% | 53.2% |
| 3682896 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.52 | 44.0 | 2.99e-01 | 100.0% | 90.1% |
| 4934641 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.52 | 43.0 | 2.86e-01 | 93.1% | 84.9% |
| 3903091 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.52 | 37.0 | 2.44e-01 | 75.9% | 31.3% |
| 5055337 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 40.0 | 3.41e-01 | 87.4% | 72.5% |
| 3496522 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 45.0 | 2.87e-01 | 100.0% | 38.1% |
| 4012805 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.52 | 36.0 | 3.14e-01 | 71.3% | 89.2% |
| 4022650 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.51 | 35.0 | 2.78e-01 | 72.4% | 45.4% |
| 3702518 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 37.0 | 3.42e-01 | 74.7% | 85.5% |
| 3972242 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.51 | 39.0 | 3.26e-01 | 85.1% | 98.8% |
| 3996977 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.51 | 38.0 | 3.11e-01 | 80.5% | 58.8% |
| 5060223 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.50 | 40.0 | 3.04e-01 | 87.4% | 35.5% |
| 3354564 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 33.0 | 3.71e-01 | 72.4% | 98.3% |