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MW794141.1__QVV97344.1__1992IndM4_0860__00172

Bact-Vir

MW794141.1__QVV97344.1__1992IndM4_0860__00172

Identity

Accession:
MW794141 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mohonavirus› Vibrio_phage_ICP1

TaxID: 979525

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-95
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.86 42.0 5.31e-01 77.7% 76.7%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.85 43.0 4.19e-01 81.9% 46.1%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.81 44.0 5.47e-01 78.7% 85.0%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.69 36.0 4.40e-01 97.9% 79.7%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 36.0 4.56e-01 77.7% 100.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 36.0 4.44e-01 81.9% 93.3%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 35.0 4.46e-01 94.7% 98.2%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 36.0 4.28e-01 81.9% 86.2%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 33.0 3.88e-01 80.9% 76.6%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 38.0 4.47e-01 100.0% 92.3%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 37.0 4.33e-01 80.9% 90.6%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 37.0 4.36e-01 78.7% 93.7%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 36.0 4.40e-01 79.8% 100.0%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 38.0 4.35e-01 100.0% 91.2%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 35.0 4.36e-01 81.9% 100.0%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 38.0 4.48e-01 81.9% 98.4%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 34.0 4.15e-01 77.7% 93.2%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 36.0 4.27e-01 100.0% 96.8%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 38.0 4.15e-01 96.8% 82.9%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.56 35.0 2.74e-01 80.9% 29.0%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 41.0 3.74e-01 100.0% 58.5%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 36.0 3.56e-01 80.9% 62.2%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.55 37.0 4.02e-01 79.8% 84.2%
1ug1A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 38.0 3.86e-01 81.9% 72.8%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 37.0 3.44e-01 97.9% 53.2%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 34.0 3.65e-01 85.1% 72.5%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 4.25e-01 98.9% 95.8%
1m9uA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 46.0 4.21e-01 98.9% 81.1%
4m8rA01 2.60.40.3920 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 35.0 3.43e-01 86.2% 61.2%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 35.0 4.14e-01 83.0% 100.0%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 35.0 3.69e-01 80.9% 77.4%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 31.0 3.75e-01 100.0% 98.2%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 33.0 3.72e-01 81.9% 84.7%
1mkeA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 43.0 3.75e-01 92.6% 68.8%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 35.0 3.88e-01 83.0% 89.3%
3h7tB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 44.0 4.09e-01 97.9% 79.5%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 33.0 3.87e-01 79.8% 97.0%
1gvzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 43.0 4.04e-01 98.9% 81.0%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4163851 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.88 43.0 5.44e-01 77.7% 76.7%
4974211 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.87 44.0 5.56e-01 77.7% 80.0%
1482194 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.86 42.0 5.31e-01 77.7% 76.7%
5063433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 43.0 5.82e-01 79.8% 94.0%
4975764 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.84 44.0 5.04e-01 79.8% 68.6%
3604145 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 45.0 5.54e-01 81.9% 83.3%
5004476 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 42.0 5.06e-01 79.8% 73.8%
5033892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 48.0 5.71e-01 79.8% 84.6%
3387119 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.81 44.0 4.53e-01 79.8% 56.7%
4527355 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.81 45.0 5.28e-01 80.9% 76.8%
4476045 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.81 44.0 5.14e-01 79.8% 74.3%
4185009 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.80 44.0 5.31e-01 79.8% 80.0%
4302032 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.80 44.0 5.31e-01 79.8% 80.0%
4104821 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.79 44.0 4.89e-01 79.8% 69.3%
4505797 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.78 43.0 5.17e-01 79.8% 80.0%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.76 34.0 4.23e-01 77.7% 66.7%
3511375 4.1.1.349 ↗ beta barrels › SH3 › SH3 › SH3 › ROF 0.75 45.0 4.74e-01 86.2% 67.1%
4937731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 37.0 4.44e-01 76.6% 80.0%
3967986 4.7.1.2 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.68 48.0 5.20e-01 86.2% 85.0%
3286662 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.66 46.0 4.51e-01 92.6% 67.0%
4170351 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.66 34.0 3.73e-01 80.9% 60.0%
4995694 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 38.0 4.80e-01 79.8% 100.0%
4969566 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.65 41.0 4.42e-01 85.1% 75.0%
4959077 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 41.0 4.91e-01 78.7% 100.0%
3243949 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 36.0 4.40e-01 76.6% 93.3%
3908332 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 36.0 4.24e-01 76.6% 86.2%
4999705 4.1.2.2 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.61 40.0 4.02e-01 85.1% 65.3%
4632138 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 38.0 4.43e-01 84.0% 92.3%
4020558 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 38.0 4.46e-01 80.9% 93.8%
3882808 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 37.0 4.07e-01 80.9% 77.3%
5073888 4.1.2.2 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.60 39.0 4.16e-01 85.1% 77.5%
3933965 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 35.0 4.30e-01 77.7% 94.8%
3899851 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 34.0 4.04e-01 76.6% 83.1%
3914346 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 38.0 3.90e-01 81.9% 67.8%
4104114 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 37.0 4.29e-01 81.9% 90.8%
4292822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 39.0 4.33e-01 85.1% 85.3%
3692073 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 35.0 3.99e-01 77.7% 81.4%
4019925 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 37.0 4.20e-01 81.9% 87.1%
3926701 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.57 36.0 4.06e-01 80.9% 86.8%
3843359 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.57 38.0 4.04e-01 79.8% 76.5%
3487686 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 35.0 3.73e-01 79.8% 69.4%
3503000 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 44.0 4.58e-01 80.9% 90.6%
137947 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.57 39.0 4.53e-01 78.7% 100.0%
3561462 148.1.3.384 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › SH3_2 0.57 35.0 2.87e-01 79.8% 34.1%
3900208 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 34.0 4.03e-01 100.0% 89.1%
3911321 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 35.0 3.74e-01 79.8% 72.5%
3269589 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 35.0 3.94e-01 79.8% 84.3%
3516244 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 38.0 4.06e-01 94.7% 83.7%
3315510 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.54 41.0 3.90e-01 79.8% 78.2%
1557493 4056.1.1.6 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › P23-45_portal_barrel 0.53 42.0 4.49e-01 100.0% 100.0%
3406777 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.53 47.0 3.46e-01 100.0% 40.0%
423468 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 35.0 3.71e-01 80.9% 76.5%
3410874 4004.1.1.0 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like 0.53 39.0 3.19e-01 80.9% 94.8%
5022745 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 40.0 3.93e-01 81.9% 75.2%
3213215 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 39.0 3.72e-01 81.9% 80.9%
4231372 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.52 36.0 4.08e-01 79.8% 97.1%
3400042 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.51 45.0 3.44e-01 100.0% 42.1%
3411238 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.51 44.0 3.23e-01 98.9% 38.6%
3189501 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 36.0 3.83e-01 76.6% 86.3%
3552125 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.50 44.0 3.33e-01 100.0% 40.6%