←Back to structures

MW794149.1__QVV99007.1__2017DRC87_0080__00016

Bact-Vir

MW794149.1__QVV99007.1__2017DRC87_0080__00016

Identity

Accession:
MW794149 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mohonavirus› Vibrio_phage_ICP1

TaxID: 979525

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-74
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 39.0 4.25e-01 97.3% 94.7%
1nltA03 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.55 43.0 4.14e-01 95.9% 75.6%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 4.33e-01 97.3% 95.6%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 31.0 3.40e-01 87.7% 74.1%
3gw6A03 3.30.2460.10 Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Endo-n-acetylneuraminidase domain 0.52 24.0 2.71e-01 100.0% 49.1%
3vqiD03 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 40.0 4.02e-01 93.2% 84.0%
7wu7501 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 32.0 2.74e-01 100.0% 38.1%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3396896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 4.91e-01 100.0% 74.7%
4532986 4232.1.1.1 ↗ few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 0.60 31.0 3.26e-01 87.7% 53.8%
185807 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.58 41.0 3.62e-01 95.9% 48.7%
3937672 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.54 42.0 3.66e-01 95.9% 54.8%
4918467 3174.1.1.2 ↗ beta barrels › Ribosomal protein L14-like › Ribosomal protein L14-related › Ribosomal protein L14-related › Ribosomal_S8e 0.53 44.0 3.44e-01 97.3% 75.0%
3717686 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.51 40.0 3.50e-01 95.9% 55.3%
3845293 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.51 40.0 3.39e-01 95.9% 50.4%
3598694 67.1.1.0 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain 0.50 39.0 3.48e-01 100.0% 56.6%