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MW794162.1__QVW02070.1__2017DhaN_1095__00219
Bact-VirMW794162.1__QVW02070.1__2017DhaN_1095__00219
Identity
- Accession:
- MW794162 ↗
- Kingdom:
- phage
Quality
96.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 102-212
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04095.23 best | NAPRTase | 31.7 | 1.90e-07 | 72.1% | 25.5% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g95B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.87 | 82.0 | 6.09e-01 | 100.0% | 43.9% |
| 2y2wC02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 56.0 | 3.90e-01 | 99.1% | 69.4% |
| 1paqA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 45.0 | 4.03e-01 | 77.5% | 72.0% |
| 3qyqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 53.0 | 4.01e-01 | 95.5% | 67.8% |
| 6vvoE02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.60 | 30.0 | 3.20e-01 | 75.7% | 52.5% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 33.0 | 3.47e-01 | 78.4% | 60.6% |
| 2xpzA04 | 1.25.40.320 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain | 0.52 | 38.0 | 3.37e-01 | 75.7% | 58.8% |
| 3k1zA02 | 1.10.150.720 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Haloacid dehalogenase-like hydrolase | 0.50 | 30.0 | 3.40e-01 | 75.7% | 78.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3496197 | 2002.4.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like | 0.89 | 81.0 | 5.72e-01 | 97.3% | 35.6% |
| 4954704 | 2002.1.1.128 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAPRTase | 0.89 | 81.0 | 5.75e-01 | 96.4% | 36.6% |
| 1778179 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.89 | 85.0 | 5.79e-01 | 100.0% | 33.8% |
| 3898322 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.88 | 83.0 | 5.65e-01 | 98.2% | 32.8% |
| 4888125 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.88 | 77.0 | 5.40e-01 | 93.7% | 33.3% |
| 4890693 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.87 | 71.0 | 4.99e-01 | 86.5% | 30.7% |
| 4853186 | 2002.1.1.128 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAPRTase | 0.85 | 75.0 | 5.30e-01 | 93.7% | 33.9% |
| 3379066 | 109.8.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Arp2/3 complex 16 KDa subunit ARPC5 › Arp2/3 complex 16 KDa subunit ARPC5 › P16-Arc | 0.55 | 41.0 | 4.01e-01 | 79.3% | 85.6% |
| 4975372 | 3960.1.1.0 ↗ | alpha arrays › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain | 0.54 | 40.0 | 3.93e-01 | 80.2% | 70.8% |
| 4954061 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.54 | 40.0 | 2.93e-01 | 79.3% | 51.4% |
| 3701495 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 37.0 | 2.98e-01 | 71.2% | 51.5% |
| 3273939 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.52 | 34.0 | 3.51e-01 | 82.0% | 69.5% |
| 4999379 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.50 | 38.0 | 3.47e-01 | 80.2% | 67.3% |
D2
medium
residues 3-97
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uokA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 28.0 | 3.01e-01 | 100.0% | 52.6% |
| 5brqA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 27.0 | 2.93e-01 | 100.0% | 51.9% |
| 6bldA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.54 | 45.0 | 3.10e-01 | 100.0% | 58.5% |
| 3cx5A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 38.0 | 2.96e-01 | 82.1% | 49.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4890692 | 325.1.4.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAMPT_N | 0.97 | 94.0 | 7.38e-01 | 100.0% | 55.2% |
| 4888124 | 325.1.4.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like | 0.95 | 91.0 | 7.38e-01 | 100.0% | 59.0% |
| None | — | 0.89 | 82.0 | 6.39e-01 | 100.0% | 50.6% | |
| 3499061 | 325.1.4.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like | 0.89 | 82.0 | 6.58e-01 | 100.0% | 55.2% |
| 3503500 | 325.1.4.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAMPT_N | 0.88 | 82.0 | 6.99e-01 | 100.0% | 65.7% |
| 3379650 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.79 | 62.0 | 5.90e-01 | 100.0% | 71.8% |
| 5048662 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.78 | 62.0 | 5.31e-01 | 100.0% | 55.2% |
| 4924988 | 325.1.1.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like › PurK_C | 0.64 | 35.0 | 4.36e-01 | 95.8% | 92.5% |
| 3519969 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.57 | 35.0 | 3.57e-01 | 100.0% | 62.2% |
| 3783532 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.56 | 36.0 | 3.88e-01 | 100.0% | 77.5% |
| 4029192 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.53 | 38.0 | 2.59e-01 | 74.7% | 33.1% |
| 5029746 | 3542.1.1.2 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › SPP | 0.53 | 42.0 | 3.11e-01 | 88.4% | 97.8% |
| 5025457 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.53 | 36.0 | 3.54e-01 | 71.6% | 86.7% |
| 3207324 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 34.0 | 3.70e-01 | 100.0% | 80.0% |
| 4230026 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.52 | 37.0 | 3.86e-01 | 91.6% | 83.5% |
| 5061235 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.52 | 39.0 | 3.01e-01 | 82.1% | 76.9% |
| 4323882 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 28.0 | 2.87e-01 | 100.0% | 50.5% |
| 3663147 | 3070.1.1.14 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › RsfS | 0.51 | 31.0 | 3.45e-01 | 100.0% | 81.4% |