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MW805361.1__URC15144.1__GD1_20__00020
Bact-VirMW805361.1__URC15144.1__GD1_20__00020
Identity
- Accession:
- MW805361 ↗
- Kingdom:
- phage
Quality
75.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 51-119
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8gccA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.76 | 58.0 | 5.07e-01 | 82.6% | 76.9% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.61 | 42.0 | 3.83e-01 | 75.4% | 51.5% |
| 3r9bA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 46.0 | 2.95e-01 | 92.8% | 37.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4476621 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.72 | 63.0 | 5.68e-01 | 100.0% | 83.2% |
| 3595797 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.70 | 48.0 | 4.28e-01 | 79.7% | 51.6% |
| 3575022 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.65 | 46.0 | 4.05e-01 | 73.9% | 51.0% |
| 3186006 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 52.0 | 3.24e-01 | 85.5% | 25.2% |
D2
medium
residues 120-216
Domain cluster:
rep: NC_042018.1__YP_009612901.1__FDI45_gp157__00157__D21-108
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.73 | 38.0 | 3.58e-01 | 71.1% | 43.1% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.69 | 46.0 | 4.51e-01 | 77.3% | 62.6% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.65 | 29.0 | 3.23e-01 | 81.4% | 51.3% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 52.0 | 4.85e-01 | 92.8% | 70.6% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 45.0 | 4.21e-01 | 88.7% | 60.0% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 43.0 | 3.65e-01 | 70.1% | 73.2% |
| 4o8sA02 | 1.20.58.1790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › JHP933, helical tail domain | 0.62 | 43.0 | 4.19e-01 | 71.1% | 99.1% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.61 | 48.0 | 4.43e-01 | 84.5% | 66.4% |
| 3udcA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 37.0 | 3.51e-01 | 87.6% | 50.4% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.56 | 39.0 | 3.51e-01 | 71.1% | 97.7% |
| 1exzB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 37.0 | 3.29e-01 | 71.1% | 67.1% |
| 4kp4A02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 36.0 | 3.20e-01 | 73.2% | 98.0% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3671258 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.74 | 66.0 | 5.92e-01 | 95.9% | 70.8% |
| 3294656 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 64.0 | 4.19e-01 | 93.8% | 39.6% |
| 3416168 | 4177.1.1.4 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › IMD | 0.71 | 52.0 | 3.95e-01 | 80.4% | 33.6% |
| 3504568 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.70 | 49.0 | 4.31e-01 | 72.2% | 97.1% |
| 3188986 | 630.1.1.1 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › Rubis-subs-bind | 0.65 | 54.0 | 4.21e-01 | 87.6% | 66.5% |
| 3608388 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.65 | 45.0 | 3.88e-01 | 71.1% | 75.2% |
| 3505389 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.63 | 53.0 | 3.49e-01 | 91.8% | 23.6% |
| 4023035 | 1065.1.1.1 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain › SPX | 0.62 | 56.0 | 4.26e-01 | 96.9% | 44.3% |
| 3285654 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.62 | 54.0 | 3.43e-01 | 94.8% | 97.3% |
| 5072280 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.61 | 52.0 | 4.04e-01 | 93.8% | 78.6% |
| 3713609 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 42.0 | 3.07e-01 | 76.3% | 53.8% |
| 3479272 | 6103.1.1.1 ↗ | alpha bundles › Death domain-associated protein 6 histone binding domain › Death domain-associated protein 6 histone binding domain › Death domain-associated protein 6 histone binding domain › DAXX_hist_bd | 0.57 | 44.0 | 3.39e-01 | 80.4% | 41.0% |
| 3610113 | 109.4.1.18 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPTA | 0.54 | 43.0 | 2.82e-01 | 84.5% | 35.9% |
| 4648941 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.54 | 45.0 | 3.79e-01 | 89.7% | 85.0% |
| 5013534 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.54 | 36.0 | 3.15e-01 | 70.1% | 79.4% |
| 3255101 | 109.4.1.682 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RasGEF_N | 0.53 | 37.0 | 3.02e-01 | 72.2% | 70.3% |
| 4957468 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 32.0 | 3.09e-01 | 70.1% | 55.5% |