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MW805361.1__URC15201.1__GD1_77__00077

Bact-Vir

MW805361.1__URC15201.1__GD1_77__00077

Identity

Accession:
MW805361 ↗
Kingdom:
phage

Quality

76.1 mean pLDDT

Taxonomy

TaxID: 2945130

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-87
PDB
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mt4A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.71 48.0 2.79e-01 96.8% 9.3%
4hxfB02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.70 54.0 3.58e-01 85.7% 38.6%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.69 51.0 5.35e-01 84.1% 89.5%
4hlbA00 3.30.70.2960 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 56.0 4.87e-01 93.7% 64.2%
8p2bA01 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.64 50.0 4.69e-01 87.3% 100.0%
4lb0A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.64 53.0 3.97e-01 93.7% 36.6%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.64 48.0 4.02e-01 81.0% 80.7%
2wqlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 56.0 4.28e-01 100.0% 53.3%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 45.0 3.60e-01 74.6% 66.7%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.63 50.0 3.59e-01 88.9% 96.9%
1tm0A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.63 51.0 3.97e-01 92.1% 61.6%
4c47A01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.61 52.0 4.26e-01 96.8% 80.3%
8p2aA01 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.61 48.0 4.40e-01 88.9% 96.6%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 3.63e-01 81.0% 62.6%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.61 53.0 3.68e-01 98.4% 87.0%
3sonA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.61 43.0 3.33e-01 76.2% 95.9%
6jptA00 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.60 48.0 4.01e-01 92.1% 52.1%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.60 47.0 4.25e-01 87.3% 97.8%
5wm1A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.60 47.0 3.97e-01 93.7% 50.5%
1vqzA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.59 45.0 4.09e-01 84.1% 95.5%
2e5aA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.59 45.0 4.05e-01 85.7% 84.9%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 50.0 3.92e-01 100.0% 60.8%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.58 49.0 3.70e-01 100.0% 50.8%
4l8jA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.58 45.0 4.04e-01 88.9% 66.3%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 3.73e-01 84.1% 100.0%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.57 48.0 4.34e-01 98.4% 68.5%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.57 45.0 3.44e-01 87.3% 37.8%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 3.38e-01 85.7% 39.7%
2qlzA02 6.10.250.2960 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.57 50.0 4.47e-01 96.8% 89.5%
1qf6A02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.56 42.0 3.57e-01 85.7% 48.1%
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.56 46.0 3.75e-01 98.4% 46.7%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.56 42.0 3.56e-01 93.7% 46.1%
4mfzA02 3.40.630.120 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.56 42.0 3.35e-01 96.8% 36.7%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 44.0 3.82e-01 90.5% 55.0%
2z5bB01 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.56 48.0 3.93e-01 96.8% 67.2%
7uclA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 44.0 3.83e-01 88.9% 70.6%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.34e-01 82.5% 96.0%
6u7tA03 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 40.0 3.28e-01 77.8% 100.0%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.55 46.0 3.85e-01 100.0% 77.9%
5l10B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.55 39.0 2.96e-01 77.8% 28.8%
2v0uA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 48.0 3.63e-01 96.8% 89.0%
1kmdA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 39.0 3.22e-01 76.2% 65.8%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.54 45.0 3.34e-01 93.7% 38.9%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 39.0 3.45e-01 85.7% 50.0%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 40.0 3.44e-01 87.3% 71.3%
5j39A01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 41.0 3.33e-01 87.3% 89.7%
3cjlA00 3.10.20.850 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 0.51 45.0 4.01e-01 98.4% 77.3%
1x51A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 39.0 3.19e-01 92.1% 49.7%
4e9kA00 2.60.120.1350 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 0.51 39.0 2.71e-01 87.3% 37.9%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.50 36.0 3.65e-01 76.2% 76.2%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 39.0 3.72e-01 85.7% 71.1%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4095038 109.4.1.1360 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CBF, NOC3p 0.82 48.0 2.71e-01 93.7% 6.5%
4183868 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.65 57.0 5.29e-01 98.4% 83.5%
4963939 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 46.0 4.62e-01 76.2% 75.4%
5011351 327.18.1.0 a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A 0.63 48.0 4.81e-01 85.7% 87.7%
3772065 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.62 53.0 4.31e-01 92.1% 93.0%
3744517 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 44.0 3.56e-01 74.6% 66.7%
4927398 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.61 51.0 3.83e-01 92.1% 80.6%
5001584 12.6.1.4 beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M 0.61 41.0 3.73e-01 79.4% 51.8%
3520868 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 50.0 3.87e-01 90.5% 99.3%
3183690 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 3.85e-01 92.1% 92.7%
3535499 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 4.22e-01 92.1% 96.4%
4507316 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.59 48.0 3.96e-01 88.9% 94.8%
3738064 304.112.1.0 a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.59 51.0 4.44e-01 100.0% 72.0%
4003998 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.59 45.0 3.50e-01 81.0% 46.9%
4938125 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.59 46.0 4.15e-01 84.1% 100.0%
4222773 4076.2.1.0 a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like 0.59 47.0 3.24e-01 85.7% 54.8%
4963006 4.1.1.490 beta barrels › SH3 › SH3 › SH3 › PF26269 0.58 46.0 4.16e-01 85.7% 87.1%
3249895 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.58 46.0 4.53e-01 95.2% 81.4%
3251559 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 39.0 4.23e-01 88.9% 90.0%
4564098 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.57 48.0 3.89e-01 92.1% 96.7%
4990321 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.55 40.0 2.76e-01 76.2% 27.0%
1567496 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.55 41.0 4.30e-01 85.7% 87.7%
4010765 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.55 49.0 3.92e-01 98.4% 90.4%
3510786 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.55 41.0 4.10e-01 85.7% 76.9%
4679171 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.55 38.0 3.11e-01 73.0% 77.4%
4377534 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.55 48.0 3.84e-01 98.4% 83.8%
3199439 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 44.0 3.17e-01 88.9% 91.6%
3578264 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 37.0 3.17e-01 71.4% 60.0%
5035818 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.54 38.0 3.15e-01 74.6% 75.7%
4486450 244.3.1.4 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.54 39.0 3.63e-01 81.0% 100.0%
5044050 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.54 45.0 3.41e-01 96.8% 73.3%
4069543 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.54 41.0 3.89e-01 88.9% 69.3%
3945393 7089.1.1.2 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 0.54 44.0 4.11e-01 90.5% 80.0%
5002490 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.53 46.0 2.89e-01 100.0% 45.9%
3232476 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 37.0 3.22e-01 73.0% 65.0%
3940300 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 37.0 2.81e-01 74.6% 40.6%
3553166 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.53 41.0 3.32e-01 85.7% 71.2%
5053329 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 49.0 3.87e-01 100.0% 63.3%
3766659 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.53 38.0 3.96e-01 85.7% 83.3%
3935469 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.52 41.0 3.97e-01 84.1% 74.3%
3486144 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 41.0 2.71e-01 92.1% 65.1%
4592880 109.4.1.574 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NOC3p 0.52 48.0 2.92e-01 98.4% 49.1%
3705745 221.13.1.0 a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.51 45.0 3.58e-01 100.0% 68.5%
3248029 223.7.1.1 a+b three layers › Profilin-like › FLJ32549 C-terminal domain-like › FLJ32549 C-terminal domain-like › C12orf66_like 0.51 41.0 3.33e-01 98.4% 98.6%
5067865 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.51 38.0 3.78e-01 85.7% 80.0%
3379810 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.51 39.0 4.01e-01 90.5% 91.7%
3620703 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 40.0 3.40e-01 88.9% 61.8%
4606103 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.50 43.0 3.54e-01 96.8% 78.3%