Back to structures

MW805361.1__URC15345.1__GD1_221__00221

Bact-Vir

MW805361.1__URC15345.1__GD1_221__00221

Identity

Accession:
MW805361 ↗
Kingdom:
phage

Quality

76.3 mean pLDDT

Taxonomy

TaxID: 2945130

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-92
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 46.0 4.85e-01 88.4% 80.8%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 4.97e-01 88.4% 83.5%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 43.0 4.66e-01 88.4% 86.8%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.89e-01 88.4% 85.2%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 43.0 4.55e-01 88.4% 80.3%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 42.0 4.47e-01 88.4% 80.8%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.43e-01 88.4% 80.0%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.62 44.0 3.74e-01 83.7% 46.0%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 43.0 3.82e-01 88.4% 50.0%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 40.0 4.33e-01 88.4% 83.1%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 39.0 4.22e-01 88.4% 80.3%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 39.0 4.32e-01 88.4% 87.7%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 4.60e-01 88.4% 100.0%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 37.0 3.96e-01 88.4% 73.0%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 39.0 4.06e-01 88.4% 72.0%
3hi7B02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 46.0 4.09e-01 87.2% 63.3%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 39.0 3.75e-01 88.4% 59.0%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 39.0 4.12e-01 88.4% 81.8%
6asoH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 35.0 3.63e-01 86.0% 65.1%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 42.0 3.64e-01 79.1% 60.2%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 4.09e-01 88.4% 82.7%
2pvzB01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.56 42.0 3.15e-01 79.1% 33.0%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.56 44.0 3.74e-01 87.2% 83.6%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 3.60e-01 88.4% 58.1%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.55 44.0 3.72e-01 88.4% 52.3%
5fi9A01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.54 38.0 2.57e-01 75.6% 85.8%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.54 43.0 3.62e-01 87.2% 61.8%
3db2B02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 44.0 3.37e-01 88.4% 73.4%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 3.81e-01 88.4% 63.2%
6vu9A02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 43.0 3.08e-01 89.5% 46.0%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 46.0 3.68e-01 98.8% 85.0%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 41.0 2.65e-01 84.9% 89.1%
4mp8A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.52 40.0 3.27e-01 82.6% 49.1%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.52 36.0 3.45e-01 86.0% 60.6%
4trkA00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.51 44.0 3.26e-01 100.0% 90.1%
1j1tA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.01e-01 88.4% 58.8%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.50 35.0 3.49e-01 82.6% 70.3%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3598052 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 48.0 4.78e-01 88.4% 70.0%
4962543 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.67 48.0 4.41e-01 74.4% 100.0%
3486357 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 50.0 5.17e-01 88.4% 83.7%
3712189 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.67 49.0 4.82e-01 88.4% 73.3%
3787684 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.67 55.0 5.13e-01 88.4% 72.4%
3710540 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.67 48.0 5.08e-01 88.4% 86.7%
3786067 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.66 47.0 4.85e-01 88.4% 81.2%
3704663 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.65 45.0 4.81e-01 88.4% 82.7%
3167351 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.65 43.0 4.31e-01 88.4% 65.9%
4024090 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.65 45.0 4.49e-01 88.4% 68.9%
3592467 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 45.0 4.78e-01 88.4% 82.7%
3915752 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.65 46.0 4.60e-01 88.4% 72.2%
3270749 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.64 45.0 4.63e-01 88.4% 78.8%
3482844 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 49.0 4.93e-01 88.4% 82.4%
3168996 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.64 52.0 4.61e-01 88.4% 64.8%
3927391 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.64 46.0 4.42e-01 88.4% 65.0%
4015537 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 42.0 4.41e-01 88.4% 75.6%
4030048 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.63 45.0 4.23e-01 88.4% 61.0%
3168781 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.63 46.0 4.32e-01 88.4% 62.9%
2325337 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.63 46.0 4.67e-01 88.4% 77.0%
3233110 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.63 50.0 4.78e-01 88.4% 73.5%
409204 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.63 43.0 4.05e-01 88.4% 58.3%
3965860 3523.1.1.1 beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG 0.63 46.0 4.38e-01 84.9% 66.0%
3505097 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.63 43.0 4.41e-01 88.4% 72.9%
3701868 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.63 43.0 4.30e-01 88.4% 68.9%
3788062 3761.1.1.0 beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related 0.63 40.0 4.12e-01 76.7% 66.7%
2632533 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.62 43.0 4.65e-01 88.4% 89.9%
3618922 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.62 46.0 4.51e-01 88.4% 72.6%
3250542 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.61 50.0 4.75e-01 88.4% 79.0%
4015654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 41.0 4.40e-01 88.4% 84.3%
3995810 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.61 50.0 4.59e-01 88.4% 79.1%
3455165 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.61 47.0 4.58e-01 88.4% 75.8%
3706504 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.61 45.0 4.62e-01 88.4% 80.0%
4017204 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.61 49.0 4.73e-01 88.4% 81.0%
3786143 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.61 44.0 4.19e-01 88.4% 63.8%
3401273 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.61 43.0 4.20e-01 89.5% 67.4%
4015057 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.67e-01 88.4% 83.0%
4013487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.29e-01 88.4% 64.5%
3224038 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.60 42.0 4.46e-01 88.4% 84.0%
4983255 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.60 40.0 4.23e-01 89.5% 78.7%
3391922 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.60 49.0 4.18e-01 88.4% 74.3%
3518029 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.60 40.0 3.90e-01 88.4% 60.0%
4990442 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.60 40.0 4.17e-01 88.4% 75.0%
3626400 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.60 42.0 3.74e-01 88.4% 49.2%
3788817 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.60 46.0 4.68e-01 88.4% 84.7%
3712963 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.59 40.0 3.96e-01 88.4% 63.8%
3509763 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.59 48.0 4.01e-01 88.4% 65.3%
4575051 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.59 39.0 4.08e-01 89.5% 73.8%
3167630 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.59 41.0 4.29e-01 88.4% 78.8%
3555586 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.59 45.0 4.40e-01 88.4% 74.7%
5000810 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.58 40.0 4.07e-01 88.4% 72.9%
4014972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.23e-01 89.5% 74.4%
3169596 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.57 47.0 4.13e-01 88.4% 68.8%
5077846 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.57 38.0 4.06e-01 88.4% 80.0%
3970000 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 41.0 3.96e-01 89.5% 67.0%
3221732 4.1.1.89 beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.56 41.0 4.28e-01 89.5% 83.7%
3167103 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.56 42.0 4.08e-01 88.4% 70.0%
3703320 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.55 40.0 4.13e-01 88.4% 84.8%
3222275 246.2.1.5 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,ASMase_C 0.55 41.0 2.66e-01 81.4% 81.6%
3393575 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.54 43.0 3.41e-01 84.9% 62.9%
3653276 244.3.1.3 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C 0.54 41.0 3.56e-01 81.4% 84.4%
3502962 4.1.1.89 beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.54 39.0 4.06e-01 88.4% 85.0%
3210560 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.53 41.0 3.90e-01 84.9% 78.6%
3920540 511.1.1.1 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.53 38.0 3.22e-01 76.7% 84.5%
5052486 2003.1.3.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.53 40.0 2.57e-01 83.7% 28.3%
3208838 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.50 42.0 3.63e-01 100.0% 69.0%