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MW805362.1__URC15377.1__JLT2_9__00009

Bact-Vir

MW805362.1__URC15377.1__JLT2_9__00009

Identity

Accession:
MW805362 ↗
Kingdom:
phage

Quality

84.6 mean pLDDT

Taxonomy

Paraglaciecola_Antarctic_JLT_virus_2

TaxID: 2945131

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-49
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 65.0 5.76e-01 100.0% 71.8%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 62.0 5.45e-01 100.0% 64.5%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 63.0 5.51e-01 100.0% 70.3%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 62.0 5.38e-01 100.0% 68.4%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 61.0 5.66e-01 100.0% 81.0%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 59.0 5.17e-01 100.0% 66.2%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 58.0 4.96e-01 100.0% 60.0%
2xi8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 60.0 5.44e-01 100.0% 77.3%
7ce1A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 48.0 4.69e-01 74.5% 76.9%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 51.0 4.82e-01 100.0% 81.5%
1tteA02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.57 42.0 4.07e-01 100.0% 71.9%
4d49A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 35.0 2.30e-01 72.3% 15.1%
6gy8A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.51 41.0 2.61e-01 100.0% 50.9%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4594772 589.1.2.1 ↗ alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.77 53.0 3.56e-01 72.3% 20.0%
3591055 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 63.0 4.95e-01 97.9% 45.7%
None — 0.74 62.0 5.86e-01 100.0% 85.0%
148652 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 63.0 5.16e-01 100.0% 57.3%
3587532 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.73 61.0 5.88e-01 100.0% 92.7%
166410 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.73 62.0 5.38e-01 100.0% 68.4%
169605 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 60.0 5.09e-01 100.0% 60.0%
5083215 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.72 61.0 5.57e-01 100.0% 73.8%
3336283 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 59.0 5.54e-01 97.9% 83.3%
3504520 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 61.0 4.83e-01 100.0% 48.0%
3062945 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 59.0 5.28e-01 100.0% 71.8%
2773 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 59.0 5.16e-01 100.0% 67.5%
5050179 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 60.0 5.63e-01 100.0% 86.7%
5048537 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.70 59.0 5.89e-01 100.0% 96.0%
None — 0.70 56.0 5.03e-01 100.0% 69.3%
4022186 101.1.4.58 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF7726 0.70 60.0 5.59e-01 100.0% 88.3%
5030212 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 58.0 5.17e-01 97.9% 71.4%
3943356 101.1.4.19 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_35 0.70 55.0 4.96e-01 97.9% 62.7%
3965656 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 58.0 5.00e-01 100.0% 58.7%
3973641 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.68 56.0 3.82e-01 100.0% 24.6%
4131083 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.67 54.0 5.03e-01 97.9% 72.3%
2845737 101.1.4.19 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_35 0.67 52.0 4.69e-01 100.0% 61.8%
4033269 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 43.0 4.35e-01 70.2% 75.6%
3967094 873.1.1.7 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd 0.60 49.0 3.37e-01 100.0% 24.0%
3956964 873.1.1.7 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd 0.59 49.0 3.31e-01 100.0% 23.4%
3725979 150.1.1.53 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin_2 0.50 36.0 2.58e-01 85.1% 64.3%
4990172 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.50 41.0 2.84e-01 100.0% 27.7%