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MW805362.1__URC15436.1__JLT2_68__00068
Bact-VirMW805362.1__URC15436.1__JLT2_68__00068
Identity
- Accession:
- MW805362 ↗
- Kingdom:
- phage
Quality
83.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-64
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gp3A03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.64 | 49.0 | 3.86e-01 | 80.6% | 53.3% |
| 3of7A00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.56 | 46.0 | 2.84e-01 | 96.8% | 46.6% |
| 4pdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 45.0 | 3.91e-01 | 90.3% | 94.9% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.55 | 39.0 | 3.34e-01 | 77.4% | 78.0% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 38.0 | 3.56e-01 | 83.9% | 96.6% |
| 3b59A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 38.0 | 3.16e-01 | 82.3% | 86.0% |
| 2b5lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 41.0 | 2.66e-01 | 100.0% | 50.3% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.44e-01 | 93.5% | 85.1% |
| 5dynA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 37.0 | 3.13e-01 | 79.0% | 74.5% |
| 6serA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 36.0 | 2.59e-01 | 79.0% | 74.1% |
| 8adbA01 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.50 | 41.0 | 2.94e-01 | 95.2% | 83.1% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.50 | 40.0 | 3.36e-01 | 91.9% | 94.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3435674 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.71 | 59.0 | 4.36e-01 | 91.9% | 90.6% |
| 4012062 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.69 | 57.0 | 4.21e-01 | 91.9% | 85.5% |
| 3798408 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.61 | 51.0 | 3.82e-01 | 93.5% | 96.1% |
| 3704922 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 47.0 | 3.02e-01 | 100.0% | 78.1% |
| 1289445 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.56 | 45.0 | 2.90e-01 | 90.3% | 28.9% |
| 3256385 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.56 | 40.0 | 3.34e-01 | 80.6% | 53.6% |
| 3429522 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 43.0 | 2.77e-01 | 91.9% | 65.0% |
| 3730307 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 43.0 | 2.79e-01 | 98.4% | 64.2% |
| 3619457 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.53 | 41.0 | 3.22e-01 | 87.1% | 75.7% |
| 3937777 | 216.1.1.15 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med14 | 0.52 | 41.0 | 3.00e-01 | 87.1% | 57.3% |
| 4265125 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.52 | 38.0 | 3.60e-01 | 80.6% | 85.0% |
| 3371576 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 44.0 | 2.69e-01 | 98.4% | 22.5% |
| 3506235 | 241.2.1.4 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Med14 | 0.52 | 40.0 | 2.93e-01 | 85.5% | 57.3% |
| 5070578 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.52 | 43.0 | 2.72e-01 | 96.8% | 51.5% |
| 5078320 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.51 | 39.0 | 3.15e-01 | 88.7% | 74.8% |
| 5040213 | 300.1.1.26 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DUF7436 | 0.51 | 35.0 | 2.76e-01 | 77.4% | 77.6% |
| 3970136 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.50 | 37.0 | 3.20e-01 | 80.6% | 82.9% |
| 3394203 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.50 | 41.0 | 2.77e-01 | 96.8% | 57.9% |
D2
high
residues 77-134
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 63.0 | 6.42e-01 | 87.9% | 93.0% |
| 3lzhA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.71 | 55.0 | 3.75e-01 | 87.9% | 24.4% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 52.0 | 4.34e-01 | 93.1% | 96.1% |
| 1dd3A01 | 1.20.5.710 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.61 | 42.0 | 4.30e-01 | 81.0% | 75.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3800210 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.82 | 72.0 | 6.99e-01 | 98.3% | 87.7% |
| 5044375 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.69 | 53.0 | 3.55e-01 | 86.2% | 20.9% |