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MW805364.1__URC15554.1__DB2_52__00053

Bact-Vir

MW805364.1__URC15554.1__DB2_52__00053

Identity

Accession:
MW805364 ↗
Kingdom:
phage

Quality

82.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-86
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08299.18 best Bac_DnaA_C 61.4 9.40e-17 81.0% 97.1%
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.94 90.0 8.62e-01 100.0% 95.7%
1l8qA03 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.89 84.0 7.61e-01 100.0% 85.0%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 52.0 6.40e-01 70.2% 94.4%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 48.0 5.95e-01 79.8% 90.7%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 46.0 5.41e-01 75.0% 77.0%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 45.0 5.20e-01 72.6% 73.0%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 44.0 4.99e-01 75.0% 73.4%
3w6vA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 51.0 4.62e-01 70.2% 78.4%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 46.0 5.17e-01 81.0% 83.1%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 40.0 4.82e-01 75.0% 87.3%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 44.0 5.11e-01 81.0% 88.3%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.70 47.0 4.31e-01 85.7% 53.2%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 4.83e-01 70.2% 98.6%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.66 47.0 4.46e-01 75.0% 63.4%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.65 53.0 4.44e-01 86.9% 91.5%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.65 52.0 4.64e-01 89.3% 89.6%
2pmiB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.62 54.0 4.02e-01 97.6% 80.8%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.61 48.0 3.99e-01 83.3% 66.2%
3ajfA00 1.20.1440.190 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein 0.61 44.0 4.28e-01 76.2% 72.8%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 3.94e-01 70.2% 67.0%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.96e-01 84.5% 63.4%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 39.0 4.28e-01 83.3% 86.4%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 46.0 4.47e-01 88.1% 82.5%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.54e-01 79.8% 100.0%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.75e-01 94.0% 93.6%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 3.70e-01 84.5% 61.6%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 46.0 4.44e-01 88.1% 86.2%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 43.0 4.41e-01 83.3% 89.0%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.64e-01 84.5% 60.8%
1sxjE03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.56 41.0 3.98e-01 78.6% 87.6%
4g3aB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 41.0 3.05e-01 79.8% 43.6%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.70e-01 85.7% 61.2%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 48.0 4.16e-01 98.8% 68.5%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 3.85e-01 92.9% 62.0%
2wzkA02 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.54 36.0 3.23e-01 70.2% 88.2%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.69e-01 89.3% 60.9%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.73e-01 90.5% 59.7%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.53 35.0 3.70e-01 72.6% 75.0%
3sl9B00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.53 40.0 3.25e-01 81.0% 66.7%
8cdaC01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.53 41.0 3.80e-01 86.9% 89.7%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 43.0 4.08e-01 91.7% 82.5%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 4.40e-01 91.7% 97.6%
5xdcB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.52 41.0 3.79e-01 86.9% 94.6%
1epuA03 1.25.40.60 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 39.0 3.58e-01 84.5% 80.6%
1sqgA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.52 44.0 3.73e-01 94.0% 99.3%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 36.0 3.78e-01 71.4% 86.8%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 41.0 3.11e-01 86.9% 45.9%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 3.75e-01 95.2% 66.9%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4102935 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.95 91.0 8.33e-01 100.0% 85.7%
4051624 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.95 91.0 8.29e-01 100.0% 85.7%
4146099 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.95 91.0 8.62e-01 100.0% 97.9%
4601417 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 90.0 8.56e-01 100.0% 94.7%
4270831 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 90.0 8.21e-01 100.0% 85.7%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 90.0 8.19e-01 100.0% 85.7%
4346134 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 89.0 8.21e-01 100.0% 86.5%
4559046 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 89.0 8.17e-01 100.0% 85.7%
4106860 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 89.0 8.49e-01 100.0% 94.7%
4379676 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.93 89.0 8.10e-01 100.0% 87.6%
4281674 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.93 89.0 8.11e-01 100.0% 85.7%
4174198 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.93 88.0 8.26e-01 100.0% 90.0%
4125972 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.93 88.0 8.24e-01 100.0% 90.0%
4604979 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.93 88.0 8.08e-01 100.0% 85.6%
4266587 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.93 87.0 8.34e-01 100.0% 93.7%
4533441 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 87.0 8.35e-01 100.0% 95.8%
4529157 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 87.0 8.51e-01 100.0% 100.0%
4606821 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 88.0 8.17e-01 100.0% 93.0%
4165809 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 83.0 8.32e-01 95.2% 100.0%
3385990 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 87.0 7.93e-01 100.0% 85.7%
4606105 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 85.0 7.99e-01 100.0% 90.0%
4067934 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 83.0 8.08e-01 97.6% 98.9%
4524648 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 84.0 7.69e-01 100.0% 85.7%
4347676 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.89 84.0 8.18e-01 100.0% 100.0%
4437729 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.89 84.0 7.85e-01 100.0% 89.0%
3512259 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.86 79.0 7.29e-01 100.0% 96.2%
3180778 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.79 51.0 5.70e-01 70.2% 84.6%
4595970 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 51.0 5.91e-01 83.3% 93.3%
4958294 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 51.0 5.84e-01 83.3% 98.3%
4590066 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.73 50.0 4.51e-01 70.2% 77.0%
4958364 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 52.0 5.01e-01 84.5% 67.4%
4489802 101.1.1.251 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.70 48.0 5.27e-01 85.7% 90.8%
4391758 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.69 47.0 4.54e-01 70.2% 63.2%
5007495 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.67 60.0 5.20e-01 97.6% 92.0%
4989143 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 58.0 5.25e-01 94.0% 100.0%
3376425 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.66 51.0 5.10e-01 81.0% 84.7%
5042483 101.1.6.38 alpha arrays › HTH › HTH › TrpR › Sigma70_r4 0.66 58.0 5.24e-01 94.0% 100.0%
4980028 101.1.2.879 alpha arrays › HTH › HTH › winged helix domain › DUF134 0.63 52.0 5.36e-01 86.9% 96.2%
3989117 101.1.1.129 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.63 52.0 4.86e-01 88.1% 100.0%
3998880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 45.0 4.34e-01 98.8% 66.3%
4991185 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.61 41.0 4.27e-01 70.2% 85.0%
4061597 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.60 46.0 4.60e-01 81.0% 78.8%
5078899 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.60 47.0 4.35e-01 85.7% 89.1%
4965798 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.59 43.0 4.57e-01 76.2% 86.7%
4927193 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.59 47.0 4.38e-01 86.9% 78.1%
4962267 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.58 45.0 4.47e-01 84.5% 82.2%
4081576 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.58 46.0 4.48e-01 85.7% 76.8%
3511544 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.58 49.0 4.10e-01 94.0% 64.1%
4943990 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.57 49.0 4.38e-01 98.8% 86.7%
3738604 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 44.0 4.15e-01 83.3% 91.4%
4956629 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.57 50.0 4.60e-01 100.0% 85.5%
4950777 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.57 40.0 4.28e-01 82.1% 87.1%
5000679 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.56 49.0 4.52e-01 98.8% 87.3%
4948165 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.55 44.0 4.09e-01 88.1% 89.1%
3959750 1075.3.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold 0.50 34.0 2.48e-01 70.2% 43.7%