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MW812341.1__QVW55666.1__pEaSNUABM9_00070__00070
Bact-VirMW812341.1__QVW55666.1__pEaSNUABM9_00070__00070
Identity
- Accession:
- MW812341 ↗
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Machinavirus›
Erwinia_phage_pEa_SNUABM_9
TaxID: 2835897
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-46_183-267
Domain cluster:
rep: OL631484.1__WCD44024.1__ECML606-1_000073__00073__D2-49_66-155
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fl7A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 27.0 | 3.35e-01 | 100.0% | 57.0% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 29.0 | 3.42e-01 | 100.0% | 58.9% |
| 5fmvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 28.0 | 3.42e-01 | 100.0% | 60.7% |
| 8afoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 27.0 | 3.27e-01 | 100.0% | 62.5% |
| 2cuhA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 27.0 | 3.18e-01 | 100.0% | 60.2% |
| 6rpxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 27.0 | 3.24e-01 | 100.0% | 65.9% |
| 4nn5C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 27.0 | 3.05e-01 | 100.0% | 60.6% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 26.0 | 2.84e-01 | 100.0% | 54.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4596902 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 28.0 | 3.31e-01 | 100.0% | 54.7% |
| 3844485 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.66 | 28.0 | 3.38e-01 | 100.0% | 58.8% |
| 3540950 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.63 | 27.0 | 3.25e-01 | 100.0% | 57.8% |
| 3578278 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.62 | 27.0 | 3.73e-01 | 100.0% | 80.0% |
| 3519423 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.59 | 27.0 | 3.08e-01 | 100.0% | 56.8% |
| 3794175 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.58 | 26.0 | 3.04e-01 | 100.0% | 54.7% |
| 4869489 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.58 | 25.0 | 3.46e-01 | 83.1% | 80.0% |
| 4934449 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.58 | 25.0 | 2.97e-01 | 100.0% | 55.6% |
| 5036165 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 25.0 | 3.31e-01 | 100.0% | 75.7% |
| 4505312 | 230.2.1.2 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 | 0.51 | 36.0 | 4.08e-01 | 86.9% | 98.9% |
D2
high
residues 56-173
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lubB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 45.0 | 4.81e-01 | 78.8% | 91.0% |
| 5b7hB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 40.0 | 4.15e-01 | 84.7% | 72.2% |
| 2esnA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 42.0 | 4.36e-01 | 78.0% | 82.0% |
| 3k2dA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 44.0 | 4.25e-01 | 83.9% | 72.5% |
| 3h4qA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 43.0 | 4.05e-01 | 80.5% | 80.7% |
| 4atnA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 51.0 | 4.42e-01 | 100.0% | 100.0% |
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 26.0 | 3.42e-01 | 88.1% | 82.0% |
| 3b43A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 29.0 | 3.20e-01 | 78.0% | 60.8% |
| 3c3pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 45.0 | 3.85e-01 | 91.5% | 93.9% |
| 2wp3O00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 29.0 | 3.16e-01 | 81.4% | 61.9% |
| 1vhsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 41.0 | 3.68e-01 | 81.4% | 82.4% |
| 4xnhC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 39.0 | 3.58e-01 | 78.8% | 83.0% |
| 4kigA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 38.0 | 3.35e-01 | 75.4% | 96.1% |
| 1anxA04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.52 | 31.0 | 3.90e-01 | 84.7% | 98.6% |
| 3tthB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 40.0 | 3.58e-01 | 81.4% | 85.4% |
| 2wv3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 30.0 | 3.21e-01 | 80.5% | 66.0% |
| 2rbkA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.51 | 29.0 | 3.10e-01 | 83.1% | 61.4% |
| 4k30A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 39.0 | 3.58e-01 | 80.5% | 69.3% |
| 3zpgA02 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.50 | 40.0 | 3.34e-01 | 86.4% | 83.8% |
| 2h85A02 | 3.40.50.11580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › nsp15 middle domain | 0.50 | 40.0 | 3.91e-01 | 83.9% | 100.0% |
| 4fvaC00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.50 | 45.0 | 3.53e-01 | 99.2% | 74.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3205582 | 605.8.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › PF27894 | 0.73 | 25.0 | 3.46e-01 | 80.5% | 58.5% |
| 4957785 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.61 | 34.0 | 3.49e-01 | 84.7% | 56.4% |
| 4965204 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.59 | 34.0 | 3.43e-01 | 84.7% | 54.2% |
| 5052652 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 41.0 | 3.52e-01 | 76.3% | 80.0% |
| 5072400 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 40.0 | 4.29e-01 | 74.6% | 91.0% |
| 4995690 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 43.0 | 3.95e-01 | 83.9% | 83.2% |
| 1870510 | 219.1.1.20 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_14 | 0.54 | 48.0 | 3.60e-01 | 100.0% | 59.4% |
| 4957078 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 41.0 | 3.67e-01 | 80.5% | 90.3% |
| 3963143 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 38.0 | 4.03e-01 | 73.7% | 91.3% |
| 3565697 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 30.0 | 2.30e-01 | 78.8% | 24.2% |
| 3865642 | 109.4.1.3322 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Pecanex_C | 0.52 | 43.0 | 3.32e-01 | 88.1% | 96.5% |
| 3565365 | 5054.1.1.110 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Pecanex_C | 0.52 | 44.0 | 3.55e-01 | 91.5% | 96.9% |
| 235716 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.51 | 40.0 | 3.40e-01 | 86.4% | 87.5% |
| 3750756 | 101.1.4.70 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pecanex_C | 0.51 | 43.0 | 3.45e-01 | 93.2% | 93.6% |
| 4959428 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.50 | 41.0 | 3.35e-01 | 89.0% | 84.0% |
| 3675211 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.50 | 43.0 | 3.49e-01 | 95.8% | 88.5% |