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MW822144.1__QWT29783.1__SEA_KIMJONGPHILL_2__00002
Bact-VirMW822144.1__QWT29783.1__SEA_KIMJONGPHILL_2__00002
Identity
- Accession:
- MW822144 ↗
- Kingdom:
- phage
Quality
61.8
mean pLDDT
Taxonomy
TaxID: 2848886
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-91
Domain cluster:
rep: AF020713.1__AAC13044.1__X__00071__D19-110
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bnkA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.72 | 62.0 | 4.79e-01 | 94.1% | 66.1% |
| 1i0rA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.72 | 61.0 | 4.98e-01 | 94.1% | 77.0% |
| 3cp3A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.71 | 63.0 | 5.46e-01 | 96.5% | 84.3% |
| 1wb1A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.71 | 61.0 | 5.45e-01 | 92.9% | 79.5% |
| 5choF00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 59.0 | 4.86e-01 | 94.1% | 76.2% |
| 3stjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 55.0 | 5.52e-01 | 96.5% | 85.9% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.66 | 42.0 | 4.89e-01 | 98.8% | 96.5% |
| 2vrsA03 | 2.60.90.40 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.65 | 58.0 | 5.00e-01 | 100.0% | 97.7% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.64 | 38.0 | 3.33e-01 | 97.6% | 39.8% |
| 2iumA00 | 2.60.90.30 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Fiber protein 1, C-terminal domain | 0.64 | 56.0 | 4.27e-01 | 100.0% | 96.2% |
| 1p4tA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 46.0 | 3.85e-01 | 82.4% | 82.6% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 31.0 | 3.50e-01 | 90.6% | 64.5% |
| 1kkeA02 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.60 | 53.0 | 4.50e-01 | 100.0% | 95.0% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 43.0 | 3.66e-01 | 80.0% | 87.2% |
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.56 | 44.0 | 3.82e-01 | 85.9% | 98.5% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 3.89e-01 | 78.8% | 66.3% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.55 | 43.0 | 3.97e-01 | 96.5% | 64.6% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 44.0 | 4.25e-01 | 87.1% | 79.2% |
| 4hh3A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 46.0 | 4.18e-01 | 100.0% | 68.4% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 36.0 | 3.76e-01 | 98.8% | 73.4% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.37e-01 | 90.6% | 78.9% |
| 3obqA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 41.0 | 3.56e-01 | 100.0% | 54.6% |
| 4tw1B00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.51 | 44.0 | 3.15e-01 | 100.0% | 71.6% |
| 7zvsB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 41.0 | 3.94e-01 | 96.5% | 77.8% |
| 2ldkA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 36.0 | 2.95e-01 | 77.6% | 57.6% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3288253 | 1.1.13.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 | 0.83 | 75.0 | 7.41e-01 | 96.5% | 92.2% |
| 4472606 | 1.1.13.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 | 0.83 | 75.0 | 7.11e-01 | 100.0% | 83.0% |
| 3956293 | 1.1.5.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF4873 | 0.83 | 76.0 | 7.18e-01 | 100.0% | 84.0% |
| 3389361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 57.0 | 5.55e-01 | 84.7% | 73.7% |
| 3237442 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 58.0 | 5.51e-01 | 85.9% | 75.0% |
| 3977990 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.72 | 65.0 | 5.23e-01 | 98.8% | 85.6% |
| 4132165 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 51.0 | 4.79e-01 | 83.5% | 64.8% |
| 4265077 | 5084.1.1.34 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 | 0.65 | 49.0 | 4.00e-01 | 80.0% | 85.0% |
| 3972868 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.64 | 48.0 | 4.59e-01 | 82.4% | 68.0% |
| 4172288 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.64 | 50.0 | 4.96e-01 | 84.7% | 81.1% |
| 4428249 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 52.0 | 4.46e-01 | 91.8% | 57.1% |
| 3787756 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.63 | 55.0 | 4.54e-01 | 98.8% | 80.4% |
| 3802051 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 4.18e-01 | 82.4% | 68.4% |
| 3258964 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 42.0 | 4.13e-01 | 76.5% | 68.9% |
| 3472188 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 51.0 | 3.34e-01 | 100.0% | 55.5% |
| 5043351 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.56 | 49.0 | 4.71e-01 | 100.0% | 100.0% |
| 4952189 | 225.1.1.6 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_2 | 0.56 | 50.0 | 4.33e-01 | 100.0% | 98.5% |
| 4958334 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.55 | 48.0 | 3.98e-01 | 100.0% | 77.5% |
| 3893043 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.55 | 38.0 | 3.02e-01 | 72.9% | 64.9% |
| 3268571 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.55 | 43.0 | 3.38e-01 | 87.1% | 53.3% |
| 3477707 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.54 | 38.0 | 3.13e-01 | 74.1% | 82.9% |
| 3973902 | 225.1.1.6 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_2 | 0.54 | 46.0 | 3.80e-01 | 96.5% | 97.5% |
| 5020831 | 881.4.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4367 | 0.54 | 48.0 | 4.25e-01 | 100.0% | 70.4% |
| 3285676 | 3077.1.1.0 ↗ | beta sandwiches › Heme-binding protein HmuY-related › Heme-binding protein HmuY-related › Heme-binding protein HmuY-related | 0.53 | 47.0 | 4.16e-01 | 98.8% | 81.3% |
| 3462119 | 9.1.1.23 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N | 0.53 | 38.0 | 3.05e-01 | 76.5% | 80.5% |
| 3373373 | 4295.1.1.1 ↗ | beta barrels › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › ADC | 0.52 | 45.0 | 3.40e-01 | 100.0% | 62.2% |
| 5030082 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 42.0 | 3.40e-01 | 91.8% | 97.1% |
| 42430 | 12.3.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C | 0.51 | 44.0 | 3.23e-01 | 98.8% | 91.3% |
| 3487868 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 34.0 | 3.82e-01 | 82.4% | 90.8% |
| 3650579 | 3459.1.1.3 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 | 0.50 | 36.0 | 3.18e-01 | 78.8% | 71.4% |