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MW822144.1__QWT29862.1__SEA_KIMJONGPHILL_81__00081

Bact-Vir

MW822144.1__QWT29862.1__SEA_KIMJONGPHILL_81__00081

Identity

Accession:
MW822144 ↗
Kingdom:
phage

Quality

77.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-131
PDB
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 30.0 4.06e-01 89.5% 76.2%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 32.0 4.22e-01 97.6% 76.4%
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 41.0 5.12e-01 88.7% 100.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 29.0 3.91e-01 89.5% 76.2%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 36.0 4.67e-01 96.0% 98.5%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 45.0 4.81e-01 91.1% 79.8%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 41.0 5.00e-01 89.5% 100.0%
3qwnD01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.63 36.0 4.64e-01 91.1% 100.0%
3f1zI00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 49.0 5.03e-01 97.6% 87.9%
6mavB02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 43.0 4.93e-01 100.0% 100.0%
4gnxC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 56.0 4.95e-01 100.0% 84.2%
2wkcB00 2.40.50.400 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein 0.62 41.0 4.68e-01 89.5% 94.4%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 45.0 4.98e-01 99.2% 99.0%
6ro0D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 46.0 4.89e-01 91.1% 90.0%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 28.0 3.56e-01 91.9% 75.8%
2e2dC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 44.0 4.90e-01 100.0% 100.0%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 45.0 4.78e-01 91.9% 91.8%
2k5vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 42.0 4.68e-01 100.0% 94.9%
1kxlA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 53.0 4.62e-01 100.0% 75.9%
6hpvA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 28.0 3.39e-01 85.5% 67.9%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 45.0 4.72e-01 100.0% 90.4%
3nwsA01 2.40.50.800 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 51.0 4.97e-01 100.0% 92.2%
2zxrA01 2.40.50.460 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 41.0 3.80e-01 100.0% 60.1%
1h6hA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 45.0 4.34e-01 87.9% 88.1%
1uapA00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 41.0 4.11e-01 93.5% 74.8%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 45.0 4.65e-01 92.7% 95.7%
1ja1A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 43.0 4.37e-01 83.1% 97.5%
1jb3A00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 44.0 4.38e-01 91.9% 83.5%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 40.0 4.17e-01 91.1% 85.6%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 42.0 4.51e-01 90.3% 97.1%
1iyxA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 38.0 3.88e-01 88.7% 72.0%
2vl6A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 44.0 4.60e-01 98.4% 99.1%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 42.0 4.16e-01 83.9% 93.0%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 2.95e-01 90.3% 36.2%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 42.0 4.07e-01 100.0% 80.1%
6ipaA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 44.0 3.98e-01 93.5% 91.5%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3969377 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 40.0 5.03e-01 88.7% 89.2%
3225328 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 43.0 5.42e-01 99.2% 97.3%
1954221 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.72 44.0 5.50e-01 91.1% 100.0%
3945427 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.71 44.0 5.16e-01 94.4% 90.6%
5074611 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.70 45.0 5.48e-01 90.3% 100.0%
3876051 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.70 45.0 5.30e-01 93.5% 94.1%
4102465 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 46.0 5.01e-01 99.2% 79.8%
4091312 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.69 42.0 4.96e-01 90.3% 88.2%
3775920 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.69 47.0 4.71e-01 96.0% 68.0%
5042375 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.69 42.0 5.26e-01 87.1% 100.0%
3410370 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 33.0 4.21e-01 100.0% 78.6%
4285674 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.68 43.0 4.90e-01 92.7% 86.7%
3590786 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.68 50.0 5.26e-01 100.0% 85.5%
3959920 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.68 48.0 5.01e-01 100.0% 79.1%
4058606 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.68 43.0 4.88e-01 92.7% 86.7%
4238204 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.68 49.0 5.30e-01 100.0% 88.6%
4419725 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.68 42.0 4.88e-01 92.7% 89.4%
4248149 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.68 42.0 4.97e-01 92.7% 91.8%
4528707 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.67 49.0 5.18e-01 100.0% 85.5%
4278743 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.66 48.0 5.03e-01 100.0% 83.6%
4369732 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 49.0 5.13e-01 100.0% 87.3%
4642580 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 46.0 4.99e-01 100.0% 86.7%
3385523 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 46.0 4.89e-01 98.4% 81.8%
4680169 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 47.0 5.01e-01 100.0% 87.6%
3387410 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 49.0 5.12e-01 100.0% 86.1%
3990098 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 46.0 4.91e-01 100.0% 83.6%
3250428 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 41.0 3.91e-01 87.9% 54.5%
3384331 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 43.0 5.04e-01 96.0% 100.0%
3252847 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 41.0 4.77e-01 87.9% 92.9%
5032255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 33.0 4.16e-01 86.3% 85.7%
4032678 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 46.0 4.98e-01 100.0% 92.0%
4672300 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 45.0 4.84e-01 96.0% 86.7%
4479389 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 48.0 4.95e-01 100.0% 85.2%
4547854 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 48.0 5.06e-01 98.4% 90.0%
3617970 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.62 46.0 4.79e-01 92.7% 84.2%
4099166 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 50.0 5.26e-01 96.0% 96.4%
3497521 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.62 48.0 4.81e-01 92.7% 79.2%
3602923 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 43.0 4.69e-01 99.2% 88.0%
3296674 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.61 48.0 5.03e-01 99.2% 92.7%
1698227 2.1.1.103 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PHA02142 0.61 31.0 4.06e-01 93.5% 96.6%
3172156 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.60 44.0 4.78e-01 95.2% 90.5%
3314558 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.60 47.0 4.48e-01 99.2% 70.8%
3705888 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 45.0 4.73e-01 99.2% 86.1%
4929168 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.60 46.0 4.68e-01 92.7% 83.3%
5031820 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.60 42.0 4.26e-01 88.7% 74.2%
4032024 2.1.1.335 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29902 0.59 42.0 4.64e-01 92.7% 95.8%
4122961 2.1.1.122 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.58 43.0 4.70e-01 90.3% 96.0%
3612666 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 48.0 4.79e-01 99.2% 86.2%
3808110 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.57 47.0 4.46e-01 99.2% 73.3%
4956351 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 51.0 3.43e-01 100.0% 30.2%
3994138 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.57 49.0 4.49e-01 93.5% 71.9%
3550844 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.56 43.0 3.97e-01 80.6% 88.1%
3813787 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 36.0 3.77e-01 89.5% 70.2%
5032193 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.56 47.0 4.98e-01 92.7% 100.0%
3791987 2.1.1.25 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.56 45.0 4.68e-01 97.6% 93.9%
3444245 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.55 28.0 3.48e-01 84.7% 78.7%
4029582 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.54 45.0 4.72e-01 100.0% 98.3%
3741279 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 43.0 4.17e-01 87.9% 94.3%
4972474 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 44.0 2.80e-01 91.1% 24.9%
4957055 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.53 30.0 3.71e-01 91.9% 90.7%
3604100 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 45.0 3.94e-01 99.2% 61.4%
3407245 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.52 43.0 4.36e-01 91.9% 93.6%
3287503 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.51 44.0 4.28e-01 92.7% 87.4%
3830448 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.50 45.0 4.32e-01 100.0% 95.2%