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MW822144.1__QWT29867.1__SEA_KIMJONGPHILL_86__00086
Bact-VirMW822144.1__QWT29867.1__SEA_KIMJONGPHILL_86__00086
Identity
- Accession:
- MW822144 ↗
- Kingdom:
- phage
Quality
94.6
mean pLDDT
Taxonomy
TaxID: 2848886
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-63
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 55.0 | 5.35e-01 | 96.8% | 72.1% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 48.0 | 4.75e-01 | 96.8% | 69.2% |
| 2yw6B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 49.0 | 3.67e-01 | 87.1% | 31.3% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 46.0 | 3.85e-01 | 88.7% | 43.4% |
| 3vhlA02 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.63 | 53.0 | 4.25e-01 | 95.2% | 47.5% |
| 2r40D00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.61 | 51.0 | 3.45e-01 | 93.5% | 27.5% |
| 3gs3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 51.0 | 3.40e-01 | 96.8% | 47.0% |
| 1f2eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 46.0 | 3.86e-01 | 93.5% | 49.1% |
| 1n2aA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 40.0 | 3.39e-01 | 87.1% | 41.5% |
| 3v9rB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.59 | 49.0 | 4.68e-01 | 96.8% | 77.8% |
| 3cegA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.58 | 49.0 | 3.19e-01 | 95.2% | 21.9% |
| 1aj5A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 50.0 | 3.62e-01 | 100.0% | 68.2% |
| 1hqvA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 49.0 | 3.53e-01 | 100.0% | 61.8% |
| 2yfvA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.54 | 45.0 | 4.40e-01 | 96.8% | 82.4% |
| 2d40B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 2.91e-01 | 98.4% | 76.8% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 44.0 | 3.16e-01 | 95.2% | 39.2% |
| 3k7mX02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.53 | 39.0 | 2.82e-01 | 82.3% | 42.7% |
| 4i43B02 | 3.30.43.40 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain | 0.51 | 44.0 | 3.70e-01 | 100.0% | 89.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3708559 | 5058.1.1.82 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › DGF-1_C | 0.78 | 54.0 | 4.66e-01 | 87.1% | 47.4% |
| 3972157 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.76 | 56.0 | 3.29e-01 | 79.0% | 10.3% |
| 3302941 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.74 | 46.0 | 3.18e-01 | 88.7% | 19.5% |
| 3612019 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.73 | 50.0 | 4.40e-01 | 87.1% | 48.9% |
| 3205582 | 605.8.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › PF27894 | 0.71 | 45.0 | 4.47e-01 | 95.2% | 61.5% |
| 3905660 | 603.1.1.164 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SERTA | 0.71 | 49.0 | 4.88e-01 | 87.1% | 69.2% |
| 4965518 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.70 | 50.0 | 4.30e-01 | 93.5% | 45.7% |
| 3382765 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 49.0 | 2.66e-01 | 79.0% | 7.6% |
| 3692649 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.66 | 44.0 | 3.70e-01 | 88.7% | 38.3% |
| 4144582 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.66 | 56.0 | 3.64e-01 | 96.8% | 26.8% |
| 3605875 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.65 | 57.0 | 4.61e-01 | 96.8% | 61.7% |
| 3224003 | 9001.1.1.3 ↗ | alpha bundles › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMPIT | 0.64 | 46.0 | 4.26e-01 | 98.4% | 60.0% |
| 3576287 | 109.4.1.1159 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IFT122 | 0.62 | 46.0 | 3.55e-01 | 93.5% | 32.9% |
| 3810882 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.62 | 52.0 | 3.46e-01 | 96.8% | 65.8% |
| 3658746 | 109.4.1.60 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rcd1 | 0.62 | 45.0 | 3.72e-01 | 87.1% | 42.6% |
| 3606304 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.61 | 53.0 | 4.01e-01 | 96.8% | 46.0% |
| 3289802 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.61 | 51.0 | 2.95e-01 | 98.4% | 10.2% |
| 3581098 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.60 | 49.0 | 4.19e-01 | 100.0% | 55.2% |
| 3256062 | 109.4.1.418 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Condensin2nSMC | 0.59 | 51.0 | 3.21e-01 | 98.4% | 43.4% |
| 3719555 | 109.4.1.761 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Telomere_reg-2 | 0.58 | 50.0 | 2.91e-01 | 95.2% | 13.8% |
| 4019619 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 50.0 | 2.91e-01 | 93.5% | 19.6% |
| 3756433 | 604.1.1.262 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PLU-1 | 0.57 | 50.0 | 4.49e-01 | 96.8% | 97.6% |
| 5061636 | 150.1.1.205 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Trp_dioxygenase | 0.57 | 48.0 | 4.33e-01 | 91.9% | 72.6% |
| 3998755 | 11.12.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD,Neur_chan_memb | 0.56 | 48.0 | 3.10e-01 | 98.4% | 68.7% |
| 3715361 | 109.4.1.257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 | 0.55 | 47.0 | 3.04e-01 | 95.2% | 26.3% |
| 3338706 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.54 | 44.0 | 2.93e-01 | 95.2% | 25.1% |
| 3833199 | 109.4.1.1369 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3, MIF4G | 0.54 | 44.0 | 2.69e-01 | 95.2% | 15.7% |
| 3998747 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.54 | 46.0 | 3.08e-01 | 98.4% | 79.6% |
| 3899800 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.54 | 48.0 | 3.57e-01 | 96.8% | 63.9% |
| 3484662 | 109.4.1.1413 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28415 | 0.53 | 46.0 | 2.90e-01 | 95.2% | 20.7% |
| 3712044 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 47.0 | 3.92e-01 | 96.8% | 65.7% |