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MW822601.1__QTP86373.1__SSRP02_p017__00017

Bact-Vir

MW822601.1__QTP86373.1__SSRP02_p017__00017

Identity

Accession:
MW822601 ↗
Kingdom:
phage

Quality

85.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-60
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07878.18 best RHH_5 35.7 7.90e-09 75.0% 88.4%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b01A00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.85 61.0 6.86e-01 76.8% 100.0%
1p94A00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.84 70.0 6.24e-01 92.9% 65.8%
1ywlA00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.54 37.0 3.16e-01 73.2% 41.7%
3w3sA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.50 39.0 2.43e-01 89.3% 38.3%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5012232 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.92 68.0 6.93e-01 78.6% 81.8%
3955892 101.1.11.2 alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 0.91 64.0 6.77e-01 73.2% 82.0%
5050855 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.89 64.0 6.50e-01 76.8% 76.4%
3985544 101.1.11.65 alpha arrays › HTH › HTH › Ribbon-helix-helix › RepB-RCR_reg 0.88 63.0 6.35e-01 75.0% 76.4%
4946063 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.82 59.0 6.04e-01 76.8% 80.0%
4946062 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.82 59.0 6.22e-01 76.8% 90.0%
5011906 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.82 59.0 6.04e-01 75.0% 78.2%
4980865 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.80 57.0 5.04e-01 75.0% 56.2%
3402082 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 58.0 4.57e-01 75.0% 68.0%
3807164 101.1.11.3 alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP 0.72 49.0 4.95e-01 71.4% 74.5%
4282585 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.55 51.0 4.36e-01 100.0% 87.1%