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MW824372.1__QZI87006.1__MYOV056v2_p0233__00232
Bact-VirMW824372.1__QZI87006.1__MYOV056v2_p0233__00232
Identity
- Accession:
- MW824372 ↗
- Kingdom:
- phage
Quality
58.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 222-279
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21817.4 best | CapR | 32.1 | 1.50e-07 | 98.3% | 58.2% |
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.78 | 56.0 | 4.78e-01 | 89.7% | 47.8% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 53.0 | 5.17e-01 | 84.5% | 75.8% |
| 4qmaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 48.0 | 3.62e-01 | 81.0% | 88.1% |
| 4rljB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.64 | 47.0 | 3.51e-01 | 79.3% | 87.8% |
| 2o1qA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 48.0 | 3.82e-01 | 84.5% | 93.7% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 49.0 | 4.45e-01 | 84.5% | 78.2% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.61 | 49.0 | 3.83e-01 | 89.7% | 54.4% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.60 | 51.0 | 4.62e-01 | 100.0% | 85.5% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 43.0 | 3.66e-01 | 79.3% | 97.1% |
| 1z6bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 43.0 | 3.29e-01 | 79.3% | 77.5% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 45.0 | 4.54e-01 | 84.5% | 90.0% |
| 6y1zA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.58 | 40.0 | 2.81e-01 | 74.1% | 49.5% |
| 2x45A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 47.0 | 3.59e-01 | 91.4% | 54.2% |
| 1ah5A03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.57 | 49.0 | 4.38e-01 | 100.0% | 79.1% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.57 | 47.0 | 3.77e-01 | 100.0% | 81.6% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 44.0 | 4.20e-01 | 84.5% | 83.6% |
| 5optY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 38.0 | 3.05e-01 | 70.7% | 62.6% |
| 1mv3A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 43.0 | 4.02e-01 | 84.5% | 90.5% |
| 2k3dA00 | 3.10.450.130 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › folded 79 residue fragment of lin0334 like domains | 0.56 | 48.0 | 4.28e-01 | 100.0% | 72.4% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.56 | 48.0 | 3.84e-01 | 100.0% | 62.6% |
| 6qk7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 45.0 | 2.81e-01 | 89.7% | 29.5% |
| 4jr7A02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 46.0 | 3.65e-01 | 93.1% | 94.2% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 47.0 | 4.36e-01 | 96.6% | 78.9% |
| 8eisA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.55 | 40.0 | 2.87e-01 | 81.0% | 67.0% |
| 4uxuA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.55 | 39.0 | 2.78e-01 | 79.3% | 74.8% |
| 1sjwA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 46.0 | 3.55e-01 | 98.3% | 81.7% |
| 2o3oA02 | 3.30.310.160 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 | 0.54 | 45.0 | 3.69e-01 | 98.3% | 57.5% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 46.0 | 3.64e-01 | 100.0% | 90.1% |
| 3f0hA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 46.0 | 3.95e-01 | 98.3% | 86.5% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 42.0 | 3.61e-01 | 82.8% | 92.1% |
| 3ml4C01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 42.0 | 3.55e-01 | 91.4% | 75.0% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.53 | 44.0 | 3.56e-01 | 100.0% | 69.8% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.53 | 43.0 | 3.39e-01 | 100.0% | 91.4% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 46.0 | 4.48e-01 | 98.3% | 100.0% |
| 5hl8C00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.53 | 38.0 | 3.52e-01 | 79.3% | 86.1% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 46.0 | 3.48e-01 | 100.0% | 56.7% |
| 2dm4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.56e-01 | 91.4% | 88.3% |
| 5bv3D01 | 3.30.200.40 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain | 0.52 | 42.0 | 3.47e-01 | 93.1% | 86.6% |
| 4b60A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 3.29e-01 | 100.0% | 87.8% |
| 4hd5A01 | 2.60.40.3760 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.51e-01 | 91.4% | 93.8% |
| 5eiqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.55e-01 | 91.4% | 90.1% |
| 2o7rA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 2.72e-01 | 100.0% | 86.3% |
| 4ix3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 39.0 | 3.28e-01 | 91.4% | 84.1% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 41.0 | 3.47e-01 | 96.6% | 83.8% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3660244 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.77 | 59.0 | 5.38e-01 | 87.9% | 62.7% |
| 3952480 | 4.1.1.292 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 | 0.71 | 47.0 | 5.18e-01 | 84.5% | 88.9% |
| 5042892 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.70 | 53.0 | 5.27e-01 | 84.5% | 78.3% |
| 3422087 | 4.1.1.282 ↗ | beta barrels › SH3 › SH3 › SH3 › GUB_WAK_bind | 0.70 | 50.0 | 4.48e-01 | 79.3% | 54.2% |
| 3212563 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 54.0 | 4.60e-01 | 91.4% | 84.2% |
| 3333660 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 51.0 | 3.71e-01 | 84.5% | 60.6% |
| 5032252 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 44.0 | 4.70e-01 | 79.3% | 82.0% |
| 4409502 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.65 | 50.0 | 4.10e-01 | 84.5% | 76.4% |
| 3424637 | 4.1.1.313 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7912 | 0.65 | 52.0 | 4.41e-01 | 87.9% | 78.9% |
| 3783981 | 2.1.1.59 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 | 0.64 | 51.0 | 4.03e-01 | 87.9% | 75.2% |
| 3627678 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.64 | 56.0 | 4.47e-01 | 100.0% | 81.7% |
| 3623290 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.64 | 52.0 | 4.65e-01 | 100.0% | 62.4% |
| 3520092 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.64 | 53.0 | 4.83e-01 | 100.0% | 67.5% |
| 3394559 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 52.0 | 4.28e-01 | 89.7% | 74.3% |
| 3390503 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.64 | 50.0 | 4.89e-01 | 98.3% | 78.5% |
| 3710595 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 56.0 | 4.51e-01 | 98.3% | 82.7% |
| 4614716 | 4.1.1.292 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 | 0.63 | 51.0 | 4.80e-01 | 89.7% | 94.3% |
| 3843359 | 4.1.1.246 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin | 0.63 | 51.0 | 4.52e-01 | 89.7% | 70.6% |
| 3180573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 51.0 | 4.36e-01 | 89.7% | 67.4% |
| 3580039 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.63 | 52.0 | 3.92e-01 | 98.3% | 41.2% |
| 3796536 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.63 | 52.0 | 4.79e-01 | 98.3% | 75.0% |
| 3684460 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.63 | 50.0 | 4.25e-01 | 87.9% | 82.1% |
| 3991018 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.63 | 53.0 | 4.83e-01 | 98.3% | 87.5% |
| 3800384 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.62 | 51.0 | 4.26e-01 | 98.3% | 58.3% |
| 3578619 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.62 | 52.0 | 4.42e-01 | 100.0% | 67.6% |
| 3228778 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.62 | 51.0 | 4.55e-01 | 98.3% | 84.4% |
| 3618804 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.62 | 51.0 | 4.60e-01 | 98.3% | 75.3% |
| 3629844 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.62 | 51.0 | 4.84e-01 | 93.1% | 81.4% |
| 3177460 | 3270.1.1.0 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase | 0.61 | 48.0 | 4.07e-01 | 87.9% | 80.0% |
| 3991019 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.61 | 51.0 | 4.95e-01 | 98.3% | 90.8% |
| 3935018 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.61 | 53.0 | 4.82e-01 | 100.0% | 77.5% |
| 4611568 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.60 | 52.0 | 4.86e-01 | 100.0% | 88.0% |
| 3420395 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.60 | 49.0 | 3.01e-01 | 89.7% | 95.9% |
| 3618387 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.60 | 49.0 | 4.11e-01 | 98.3% | 60.9% |
| 3517453 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.60 | 48.0 | 4.41e-01 | 98.3% | 66.3% |
| 3733972 | 9.4.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › PF26335 | 0.60 | 50.0 | 4.00e-01 | 100.0% | 70.8% |
| 3616598 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.59 | 49.0 | 4.30e-01 | 98.3% | 73.7% |
| 3481726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.55e-01 | 84.5% | 91.7% |
| 3709381 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 50.0 | 2.99e-01 | 94.8% | 21.9% |
| 4137393 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.59 | 50.0 | 3.80e-01 | 98.3% | 49.3% |
| 3997946 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.59 | 49.0 | 3.58e-01 | 98.3% | 35.6% |
| 3706000 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.59 | 45.0 | 4.20e-01 | 84.5% | 84.0% |
| 5078753 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.59 | 42.0 | 3.15e-01 | 79.3% | 55.9% |
| 509 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.59 | 47.0 | 4.24e-01 | 89.7% | 79.5% |
| 4933001 | 3933.1.1.0 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 | 0.59 | 48.0 | 4.43e-01 | 89.7% | 98.7% |
| 3619225 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.59 | 49.0 | 3.57e-01 | 98.3% | 36.1% |
| 3496461 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.59 | 45.0 | 3.47e-01 | 86.2% | 60.0% |
| 3926157 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.59 | 51.0 | 4.57e-01 | 100.0% | 73.5% |
| 4501226 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 49.0 | 4.77e-01 | 94.8% | 95.4% |
| 3619215 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 53.0 | 4.34e-01 | 98.3% | 67.0% |
| 3591158 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 49.0 | 3.87e-01 | 94.8% | 63.2% |
| 3222146 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.58 | 52.0 | 5.03e-01 | 98.3% | 90.8% |
| 5030187 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.58 | 47.0 | 4.30e-01 | 91.4% | 69.2% |
| 4058788 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.58 | 42.0 | 3.72e-01 | 77.6% | 77.6% |
| 3703907 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 48.0 | 4.66e-01 | 93.1% | 92.3% |
| 5017104 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 3.51e-01 | 91.4% | 92.8% |
| 3889551 | 4.1.1.134 ↗ | beta barrels › SH3 › SH3 › SH3 › MUM1-like_PWWP | 0.56 | 49.0 | 3.90e-01 | 98.3% | 59.2% |
| 4251413 | 4099.1.1.26 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 | 0.56 | 48.0 | 3.90e-01 | 100.0% | 83.5% |
| 4120507 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.55 | 39.0 | 3.41e-01 | 89.7% | 47.4% |
| 3586192 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.55 | 44.0 | 4.16e-01 | 98.3% | 78.7% |
| 3406663 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.54 | 43.0 | 4.53e-01 | 86.2% | 100.0% |
| 3466857 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.54 | 42.0 | 2.92e-01 | 87.9% | 36.3% |
| 3695678 | 3924.1.1.0 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 | 0.54 | 42.0 | 2.53e-01 | 84.5% | 16.4% |
| 3626585 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 3.34e-01 | 91.4% | 87.1% |
| 4950190 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.54 | 44.0 | 3.38e-01 | 91.4% | 54.1% |
| 3250264 | 11.1.1.820 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd | 0.53 | 41.0 | 3.62e-01 | 91.4% | 81.1% |
| 4023473 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 2.41e-01 | 86.2% | 36.2% |
| 3932007 | 7579.1.1.35 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PGAP1 | 0.52 | 42.0 | 2.77e-01 | 93.1% | 81.4% |
| 5057639 | 7515.1.1.2 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase | 0.52 | 42.0 | 2.55e-01 | 94.8% | 78.0% |
| 4930528 | 11.1.1.1432 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26259 | 0.52 | 43.0 | 3.51e-01 | 100.0% | 70.0% |
| 3600429 | 6070.1.1.0 ↗ | few secondary structure elements › Sortilin C-terminal domain › Sortilin C-terminal domain › Sortilin C-terminal domain | 0.51 | 35.0 | 3.68e-01 | 70.7% | 92.0% |
| 3194191 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.51 | 43.0 | 2.56e-01 | 100.0% | 23.5% |
| 3800832 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.51 | 43.0 | 4.14e-01 | 98.3% | 90.0% |
| 3275620 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 3.50e-01 | 86.2% | 90.0% |
| 297101 | 11.1.1.43 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Flavi_glycop_C | 0.51 | 39.0 | 3.47e-01 | 93.1% | 79.8% |
D2
high
residues 284-352
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05265.21 best | DUF723 | 34.4 | 3.10e-08 | 91.3% | 90.5% |
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.69 | 47.0 | 4.17e-01 | 71.0% | 88.9% |
| 6b1zA02 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.68 | 32.0 | 2.56e-01 | 71.0% | 23.3% |
| 7nasX01 | 3.30.300.70 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › RimP-like superfamily, N-terminal | 0.66 | 49.0 | 4.72e-01 | 78.3% | 70.9% |
| 5j60B02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 44.0 | 3.69e-01 | 71.0% | 82.5% |
| 3kewB02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.65 | 45.0 | 3.51e-01 | 71.0% | 88.9% |
| 4i8oA01 | 3.30.310.240 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain | 0.63 | 46.0 | 4.32e-01 | 79.7% | 88.8% |
| 1s68A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.62 | 44.0 | 3.85e-01 | 76.8% | 62.8% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.60 | 45.0 | 3.76e-01 | 81.2% | 50.8% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 51.0 | 4.23e-01 | 97.1% | 100.0% |
| 2dr1A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 51.0 | 4.22e-01 | 100.0% | 73.3% |
| 5ih0A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 48.0 | 4.34e-01 | 88.4% | 100.0% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 39.0 | 4.35e-01 | 76.8% | 92.0% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 47.0 | 3.95e-01 | 89.9% | 93.5% |
| 2f4qA01 | 3.30.66.10 | Alpha Beta › 2-Layer Sandwich › Viral Topoisomerase I › DNA topoisomerase I domain | 0.58 | 38.0 | 3.85e-01 | 75.4% | 65.3% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 38.0 | 3.73e-01 | 76.8% | 63.0% |
| 4z3xA03 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.57 | 50.0 | 3.67e-01 | 98.6% | 75.8% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.57 | 44.0 | 4.40e-01 | 84.1% | 98.6% |
| 2kigA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.57 | 47.0 | 3.66e-01 | 95.7% | 91.9% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 43.0 | 4.42e-01 | 85.5% | 94.0% |
| 4uxuA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.56 | 41.0 | 2.93e-01 | 79.7% | 59.0% |
| 3e82E02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 46.0 | 3.43e-01 | 98.6% | 36.0% |
| 3bb8A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 45.0 | 3.77e-01 | 95.7% | 93.9% |
| 4mtsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 45.0 | 3.78e-01 | 95.7% | 92.2% |
| 4itjB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 38.0 | 3.50e-01 | 72.5% | 89.8% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 42.0 | 3.15e-01 | 97.1% | 32.4% |
| 1aorA02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.54 | 46.0 | 3.43e-01 | 98.6% | 77.4% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.53 | 42.0 | 3.64e-01 | 88.4% | 72.2% |
| 3rheA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 34.0 | 2.98e-01 | 71.0% | 39.5% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 42.0 | 4.04e-01 | 88.4% | 80.2% |
| 3t4nA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.52 | 42.0 | 3.86e-01 | 92.8% | 80.2% |
| 1ykdB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 38.0 | 2.84e-01 | 78.3% | 81.8% |
| 2ogaA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 44.0 | 3.74e-01 | 100.0% | 96.0% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.52 | 40.0 | 2.71e-01 | 88.4% | 25.5% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 3.68e-01 | 85.5% | 90.5% |
| 1b8gA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 37.0 | 2.84e-01 | 92.8% | 31.7% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.51 | 38.0 | 3.48e-01 | 81.2% | 99.0% |
| 1cjxA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 36.0 | 2.88e-01 | 75.4% | 37.3% |
| 3a7rA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 42.0 | 2.94e-01 | 95.7% | 40.3% |
| 4i8iA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 40.0 | 2.83e-01 | 91.3% | 51.4% |
| 4wh5A00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.50 | 40.0 | 3.13e-01 | 88.4% | 55.7% |
| 1nkiA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 42.0 | 3.47e-01 | 97.1% | 78.4% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081654 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.86 | 70.0 | 7.46e-01 | 94.2% | 100.0% |
| 3230843 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.67 | 54.0 | 4.87e-01 | 91.3% | 100.0% |
| 3955640 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 50.0 | 4.43e-01 | 91.3% | 98.2% |
| 3214741 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 50.0 | 4.61e-01 | 87.0% | 100.0% |
| 4006548 | 331.19.1.2 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N | 0.63 | 46.0 | 4.20e-01 | 79.7% | 83.2% |
| 5044647 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 49.0 | 3.83e-01 | 87.0% | 94.8% |
| 3701382 | 312.1.1.8 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C | 0.60 | 43.0 | 2.91e-01 | 75.4% | 96.1% |
| 4959884 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.60 | 40.0 | 4.34e-01 | 81.2% | 87.3% |
| 4055256 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 41.0 | 3.77e-01 | 72.5% | 56.7% |
| 3572958 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.59 | 47.0 | 5.01e-01 | 89.9% | 100.0% |
| 5014724 | 295.1.1.51 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C | 0.59 | 38.0 | 3.40e-01 | 78.3% | 45.0% |
| 5031565 | 211.1.1.7 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_4 | 0.59 | 42.0 | 3.44e-01 | 75.4% | 51.5% |
| 4152366 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 50.0 | 3.98e-01 | 97.1% | 95.9% |
| 5045199 | 3016.1.1.6 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › DegT_DnrJ_EryC1 | 0.59 | 48.0 | 4.06e-01 | 94.2% | 95.2% |
| 4329812 | 3016.1.1.6 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › DegT_DnrJ_EryC1 | 0.58 | 49.0 | 3.89e-01 | 95.7% | 93.3% |
| 4963407 | 304.7.1.31 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › PF26036 | 0.58 | 36.0 | 3.58e-01 | 76.8% | 58.7% |
| 4028603 | 5.1.4.402 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30552 | 0.58 | 48.0 | 3.04e-01 | 98.6% | 20.0% |
| 5043832 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 46.0 | 3.88e-01 | 88.4% | 97.5% |
| 4064452 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.57 | 45.0 | 3.65e-01 | 88.4% | 87.1% |
| 5031165 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.57 | 46.0 | 4.63e-01 | 88.4% | 98.6% |
| 5004414 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.57 | 40.0 | 3.40e-01 | 73.9% | 99.1% |
| 3303879 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.57 | 45.0 | 3.25e-01 | 94.2% | 85.8% |
| 3492441 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 43.0 | 4.27e-01 | 85.5% | 94.7% |
| 4931824 | 3509.1.1.1 ↗ | a+b complex topology › RapA C-terminal domain › RapA C-terminal domain › RapA C-terminal domain › RapA_C | 0.56 | 42.0 | 2.99e-01 | 81.2% | 41.6% |
| 3189510 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 40.0 | 4.24e-01 | 76.8% | 98.3% |
| 4928129 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.56 | 47.0 | 3.81e-01 | 97.1% | 71.7% |
| 3942661 | 620.1.1.2 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB | 0.56 | 38.0 | 3.00e-01 | 81.2% | 31.6% |
| 428210 | 3243.1.1.1 ↗ | alpha complex topology › VopL dimerization domain › VopL dimerization domain › VopL dimerization domain › VCD | 0.56 | 39.0 | 2.76e-01 | 73.9% | 31.0% |
| 3881111 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 41.0 | 3.77e-01 | 78.3% | 61.1% |
| 3688749 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.54 | 44.0 | 3.64e-01 | 97.1% | 56.4% |
| 5076836 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.54 | 47.0 | 2.83e-01 | 97.1% | 18.2% |
| 3377905 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 41.0 | 2.93e-01 | 85.5% | 68.0% |
| 3315025 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.53 | 40.0 | 3.89e-01 | 88.4% | 73.8% |
| 4362720 | 2.1.1.48 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C | 0.53 | 36.0 | 3.86e-01 | 73.9% | 86.2% |
| 3515117 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 40.0 | 2.90e-01 | 84.1% | 73.8% |
| 4022912 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 39.0 | 2.50e-01 | 82.6% | 22.5% |
| 4097002 | 2.1.1.48 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C | 0.52 | 36.0 | 3.88e-01 | 72.5% | 89.8% |
| 3697598 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.52 | 42.0 | 3.42e-01 | 91.3% | 84.2% |
| 4043931 | 2.1.1.9 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e | 0.52 | 35.0 | 3.75e-01 | 73.9% | 83.3% |
| 4084990 | 304.30.1.1 ↗ | a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A | 0.51 | 41.0 | 3.84e-01 | 87.0% | 85.9% |
| 4263412 | 620.1.1.2 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB | 0.51 | 39.0 | 3.02e-01 | 84.1% | 36.8% |
| 3684504 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.51 | 37.0 | 3.31e-01 | 79.7% | 81.0% |
| 4192177 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.51 | 37.0 | 2.34e-01 | 79.7% | 56.7% |
| 3536576 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.50 | 34.0 | 3.22e-01 | 78.3% | 56.5% |
| 4493573 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.50 | 36.0 | 2.62e-01 | 78.3% | 26.5% |
| 2472880 | 211.1.1.18 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Diox-like_N | 0.50 | 33.0 | 3.20e-01 | 71.0% | 56.6% |
| 5020059 | 218.4.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 | 0.50 | 36.0 | 3.25e-01 | 78.3% | 98.0% |
D3
high
residues 356-409
Domain cluster:
rep: NC_027399.1__YP_010843511.1__ACQ27_gp627__00627__D96-166
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cy8A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.70 | 54.0 | 3.45e-01 | 83.3% | 57.3% |
| 2qguA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 53.0 | 4.47e-01 | 88.9% | 93.1% |
| 2xlpB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.69 | 53.0 | 3.20e-01 | 83.3% | 44.1% |
| 2hw6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 49.0 | 4.24e-01 | 77.8% | 88.6% |
| 3zh8C01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 50.0 | 3.91e-01 | 77.8% | 68.7% |
| 4tm3A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 57.0 | 3.39e-01 | 92.6% | 38.9% |
| 2r0cA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 51.0 | 3.31e-01 | 83.3% | 47.5% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 58.0 | 4.22e-01 | 98.1% | 59.5% |
| 2f2uB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 48.0 | 3.37e-01 | 77.8% | 42.4% |
| 2w5aA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 49.0 | 4.64e-01 | 77.8% | 87.5% |
| 4eqmA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 56.0 | 4.79e-01 | 94.4% | 93.3% |
| 2weiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 49.0 | 4.20e-01 | 79.6% | 88.9% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.67 | 57.0 | 4.62e-01 | 98.1% | 74.8% |
| 4bfmA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.67 | 52.0 | 3.26e-01 | 87.0% | 25.9% |
| 3o2zP00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 47.0 | 3.61e-01 | 74.1% | 73.3% |
| 4ks7A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 49.0 | 4.05e-01 | 79.6% | 77.6% |
| 4o38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 49.0 | 4.11e-01 | 81.5% | 91.7% |
| 4b63A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 49.0 | 2.92e-01 | 83.3% | 35.3% |
| 3a7fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 48.0 | 4.06e-01 | 79.6% | 82.8% |
| 4c8bA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.65 | 47.0 | 3.00e-01 | 77.8% | 28.3% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 55.0 | 4.50e-01 | 98.1% | 71.2% |
| 2y7jA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 46.0 | 3.97e-01 | 77.8% | 93.3% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 54.0 | 4.56e-01 | 98.1% | 75.5% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 41.0 | 3.87e-01 | 72.2% | 52.2% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 47.0 | 4.20e-01 | 79.6% | 80.8% |
| 3f8dA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 54.0 | 4.18e-01 | 96.3% | 87.0% |
| 2j3lA01 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 53.0 | 4.31e-01 | 98.1% | 65.5% |
| 2x7fC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 46.0 | 3.86e-01 | 77.8% | 88.3% |
| 2q5iA03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 54.0 | 4.25e-01 | 100.0% | 63.6% |
| 5l37C00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.63 | 45.0 | 3.86e-01 | 75.9% | 86.0% |
| 3nuhB03 | 3.10.20.690 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.63 | 53.0 | 4.57e-01 | 98.1% | 68.5% |
| 3s5wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 54.0 | 3.23e-01 | 98.1% | 39.0% |
| 2oap101 | 3.30.450.380 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.63 | 52.0 | 3.51e-01 | 94.4% | 66.4% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 52.0 | 4.60e-01 | 94.4% | 79.0% |
| 5hl8C00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.62 | 50.0 | 4.54e-01 | 94.4% | 91.1% |
| 1uswA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 49.0 | 3.22e-01 | 90.7% | 89.2% |
| 2qcuB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 46.0 | 3.11e-01 | 83.3% | 56.3% |
| 5w7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 48.0 | 4.02e-01 | 87.0% | 89.7% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.62 | 46.0 | 4.60e-01 | 79.6% | 81.5% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.62 | 47.0 | 3.26e-01 | 85.2% | 25.1% |
| 1z87A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 42.0 | 3.46e-01 | 72.2% | 40.0% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 45.0 | 4.50e-01 | 79.6% | 98.2% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.61 | 45.0 | 4.48e-01 | 79.6% | 75.4% |
| 2r6uA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 45.0 | 3.52e-01 | 83.3% | 36.1% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.60 | 49.0 | 3.71e-01 | 100.0% | 76.2% |
| 5cqfA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 50.0 | 3.02e-01 | 98.1% | 39.6% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 47.0 | 4.35e-01 | 90.7% | 68.5% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.59 | 44.0 | 4.41e-01 | 81.5% | 91.1% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 43.0 | 4.18e-01 | 79.6% | 87.1% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.58 | 48.0 | 3.27e-01 | 98.1% | 92.1% |
| 3tw6D02 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.58 | 45.0 | 4.09e-01 | 85.2% | 71.1% |
| 3bb8A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 49.0 | 3.78e-01 | 98.1% | 86.4% |
| 2l8oA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 49.0 | 3.69e-01 | 100.0% | 58.3% |
| 3l20A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 42.0 | 3.03e-01 | 74.1% | 26.0% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 46.0 | 3.64e-01 | 100.0% | 80.1% |
| 3oxhA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 42.0 | 3.24e-01 | 83.3% | 31.4% |
| 3vwaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 45.0 | 3.93e-01 | 92.6% | 94.4% |
| 6vp6A03 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 46.0 | 2.91e-01 | 94.4% | 22.4% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 47.0 | 4.26e-01 | 96.3% | 84.0% |
| 3dr4A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 47.0 | 3.72e-01 | 100.0% | 84.8% |
| 3kxvA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.56 | 38.0 | 3.97e-01 | 72.2% | 90.0% |
| 5jmfA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 44.0 | 2.98e-01 | 100.0% | 83.4% |
| 4ge6A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 47.0 | 3.00e-01 | 100.0% | 35.6% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 36.0 | 3.47e-01 | 74.1% | 54.5% |
| 3bg3A01 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.55 | 45.0 | 3.73e-01 | 92.6% | 82.2% |
| 1qypA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 37.0 | 3.72e-01 | 72.2% | 80.7% |
| 1twfI02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 38.0 | 3.40e-01 | 72.2% | 60.5% |
| 1fvuB00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.55 | 46.0 | 3.59e-01 | 96.3% | 75.2% |
| 1khdD02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.54 | 45.0 | 3.06e-01 | 98.1% | 83.4% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 39.0 | 3.34e-01 | 79.6% | 63.9% |
| 3po3S02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 36.0 | 3.36e-01 | 70.4% | 62.2% |
| 2vnuD04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 42.0 | 3.87e-01 | 92.6% | 77.2% |
| 4bs9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 42.0 | 2.94e-01 | 90.7% | 62.4% |
| 2w8eA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.54 | 42.0 | 2.95e-01 | 92.6% | 79.3% |
| 5gneA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 43.0 | 2.85e-01 | 100.0% | 35.9% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 3.19e-01 | 77.8% | 54.9% |
| 3cloC01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 41.0 | 2.92e-01 | 94.4% | 80.3% |
| 1dynA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 34.0 | 2.84e-01 | 72.2% | 40.7% |
| 1uhzA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 40.0 | 3.56e-01 | 96.3% | 79.8% |
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.51 | 39.0 | 3.22e-01 | 92.6% | 45.8% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3518287 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.73 | 59.0 | 4.59e-01 | 88.9% | 53.0% |
| 4024807 | 206.1.1.87 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, RIO1 | 0.71 | 59.0 | 3.72e-01 | 94.4% | 31.4% |
| 3180655 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.70 | 59.0 | 4.39e-01 | 98.1% | 67.3% |
| 3605826 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.69 | 48.0 | 3.06e-01 | 74.1% | 28.3% |
| 4163844 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.69 | 57.0 | 4.88e-01 | 98.1% | 78.9% |
| 3201592 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.69 | 46.0 | 3.05e-01 | 74.1% | 17.3% |
| 4562754 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.68 | 58.0 | 4.83e-01 | 98.1% | 82.0% |
| 4030855 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.68 | 52.0 | 3.20e-01 | 83.3% | 57.8% |
| 3419945 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.68 | 45.0 | 3.49e-01 | 70.4% | 32.2% |
| 3389626 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.67 | 55.0 | 5.04e-01 | 96.3% | 80.0% |
| 5072324 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.67 | 43.0 | 3.68e-01 | 77.8% | 37.9% |
| 3593954 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.67 | 47.0 | 2.95e-01 | 75.9% | 25.5% |
| 3609256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 58.0 | 5.01e-01 | 98.1% | 77.6% |
| 3388188 | 206.1.3.43 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF6815 | 0.67 | 58.0 | 3.80e-01 | 100.0% | 27.1% |
| 4519674 | 4.1.1.186 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5397 | 0.66 | 53.0 | 5.23e-01 | 90.7% | 91.4% |
| 3319421 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 48.0 | 5.02e-01 | 79.6% | 96.0% |
| 4873705 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.66 | 52.0 | 3.96e-01 | 88.9% | 98.5% |
| 4964086 | 2004.1.1.1218 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PilB3_C | 0.65 | 50.0 | 2.90e-01 | 90.7% | 9.1% |
| 3417528 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 50.0 | 3.08e-01 | 83.3% | 27.2% |
| 3902096 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.65 | 45.0 | 3.21e-01 | 72.2% | 25.8% |
| 3577425 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 50.0 | 2.78e-01 | 83.3% | 13.8% |
| 4497830 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.65 | 53.0 | 3.64e-01 | 92.6% | 82.6% |
| 3317787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 48.0 | 4.99e-01 | 79.6% | 96.0% |
| 3699366 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 48.0 | 3.08e-01 | 81.5% | 29.3% |
| 4238930 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 54.0 | 4.54e-01 | 98.1% | 82.0% |
| 4948812 | 2003.1.2.297 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_dim | 0.65 | 49.0 | 2.93e-01 | 83.3% | 22.1% |
| 3284625 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.65 | 49.0 | 2.91e-01 | 83.3% | 37.8% |
| 5028505 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.65 | 46.0 | 3.38e-01 | 75.9% | 61.4% |
| 3639223 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.65 | 53.0 | 3.30e-01 | 94.4% | 98.8% |
| 4315674 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.65 | 54.0 | 4.59e-01 | 98.1% | 76.8% |
| 4286008 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 54.0 | 4.52e-01 | 98.1% | 74.0% |
| 4958447 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.64 | 51.0 | 3.71e-01 | 90.7% | 64.2% |
| 3281618 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.64 | 56.0 | 4.62e-01 | 100.0% | 75.0% |
| 3788403 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.64 | 46.0 | 2.87e-01 | 79.6% | 24.3% |
| 4245071 | 2003.1.2.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.64 | 51.0 | 3.18e-01 | 88.9% | 47.3% |
| 3587082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 51.0 | 5.14e-01 | 92.6% | 92.6% |
| 4046713 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 52.0 | 4.52e-01 | 96.3% | 84.4% |
| 3605210 | 206.1.1.78 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kinase-like | 0.63 | 45.0 | 2.83e-01 | 75.9% | 26.9% |
| 3738641 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.63 | 54.0 | 4.92e-01 | 98.1% | 77.3% |
| 4639808 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.63 | 52.0 | 4.48e-01 | 96.3% | 84.4% |
| 4882787 | 375.1.1.67 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N | 0.63 | 42.0 | 4.45e-01 | 70.4% | 91.5% |
| 3336463 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 44.0 | 3.91e-01 | 85.2% | 50.0% |
| 4935198 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.62 | 53.0 | 3.81e-01 | 96.3% | 90.0% |
| 4031833 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 50.0 | 4.95e-01 | 96.3% | 98.3% |
| 4306285 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 51.0 | 4.71e-01 | 90.7% | 78.6% |
| 3973131 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.62 | 52.0 | 3.13e-01 | 98.1% | 39.1% |
| 3598363 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.62 | 52.0 | 3.23e-01 | 98.1% | 33.2% |
| 3814411 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 53.0 | 4.33e-01 | 100.0% | 58.1% |
| 4033266 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.61 | 53.0 | 3.44e-01 | 100.0% | 83.8% |
| 3301450 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.61 | 45.0 | 3.13e-01 | 81.5% | 46.3% |
| 3273270 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 50.0 | 3.30e-01 | 98.1% | 37.3% |
| 3969301 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.60 | 50.0 | 3.89e-01 | 96.3% | 87.7% |
| 3281458 | 2003.1.3.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase | 0.60 | 50.0 | 3.00e-01 | 96.3% | 39.1% |
| 3718535 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 41.0 | 2.59e-01 | 74.1% | 12.7% |
| 4958343 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.59 | 42.0 | 3.64e-01 | 77.8% | 75.6% |
| 3884987 | 316.1.1.64 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › TUTase, MTPAP-like_central | 0.59 | 47.0 | 3.45e-01 | 94.4% | 30.0% |
| 3816949 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.59 | 48.0 | 3.10e-01 | 96.3% | 34.0% |
| 5073414 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.58 | 44.0 | 4.44e-01 | 83.3% | 81.8% |
| 3493166 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.58 | 46.0 | 2.68e-01 | 100.0% | 20.0% |
| 4237612 | 3006.1.1.6 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C | 0.57 | 46.0 | 4.12e-01 | 100.0% | 90.6% |
| 2574473 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.56 | 39.0 | 4.32e-01 | 77.8% | 97.6% |
| 4144942 | 70.3.1.12 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 | 0.56 | 40.0 | 3.48e-01 | 75.9% | 91.8% |
| 4140248 | 5.1.4.577 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › YqgU | 0.56 | 44.0 | 2.87e-01 | 96.3% | 22.6% |
| 4945758 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 37.0 | 3.51e-01 | 70.4% | 65.7% |
| 3444216 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.56 | 45.0 | 2.90e-01 | 94.4% | 32.5% |
| 3437840 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.56 | 46.0 | 2.94e-01 | 98.1% | 26.1% |
| 1839428 | 12.3.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III | 0.55 | 44.0 | 2.97e-01 | 100.0% | 83.1% |
| 3930651 | 3246.1.1.4 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAMTS_CR_3 | 0.55 | 43.0 | 3.71e-01 | 90.7% | 52.6% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 46.0 | 4.23e-01 | 100.0% | 85.3% |
| 3532417 | 2007.2.3.21 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK | 0.55 | 46.0 | 2.96e-01 | 100.0% | 33.6% |
| 4990514 | 3016.1.1.6 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › DegT_DnrJ_EryC1 | 0.55 | 46.0 | 3.41e-01 | 98.1% | 87.9% |
| 4986263 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 37.0 | 2.79e-01 | 74.1% | 38.1% |
| 3694207 | 4161.1.1.2 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N | 0.54 | 43.0 | 3.58e-01 | 94.4% | 100.0% |
| 3309343 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.54 | 37.0 | 3.70e-01 | 70.4% | 80.0% |
| 3495913 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 37.0 | 3.60e-01 | 72.2% | 76.7% |
| 3445416 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 42.0 | 2.66e-01 | 94.4% | 30.8% |
| 3445009 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.54 | 43.0 | 3.15e-01 | 96.3% | 58.1% |
| 3935235 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.53 | 41.0 | 2.70e-01 | 96.3% | 26.2% |
| 2429160 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.51 | 41.0 | 3.47e-01 | 100.0% | 82.6% |
| 3646226 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.50 | 38.0 | 3.49e-01 | 87.0% | 83.7% |
| 3476842 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 40.0 | 3.22e-01 | 100.0% | 84.6% |
D4
high
residues 427-543