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MW824375.1__QZI90338.1__MYOV003v1_p0014__00014

Bact-Vir

MW824375.1__QZI90338.1__MYOV003v1_p0014__00014

Identity

Accession:
MW824375 ↗
Kingdom:
phage

Quality

67.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Vibrio_phage_207E48.1

TaxID: 2859310

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-89
PDB
D2 high residues 92-189
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.68 46.0 5.24e-01 73.5% 95.7%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.91e-01 83.7% 88.5%
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.62 45.0 5.03e-01 76.5% 97.4%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 4.76e-01 85.7% 98.1%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.69e-01 70.4% 51.1%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 4.00e-01 74.5% 61.0%
1jvaB02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.59 40.0 3.90e-01 72.4% 61.8%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 4.08e-01 70.4% 71.0%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.59 40.0 3.64e-01 70.4% 79.4%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.56e-01 72.4% 46.7%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.16e-01 76.5% 76.2%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 4.79e-01 83.7% 100.0%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.49e-01 85.7% 83.2%
3pqvC01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.56 43.0 3.21e-01 81.6% 99.6%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 37.0 3.35e-01 70.4% 47.2%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 4.38e-01 77.6% 96.3%
1ef0B02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.56 46.0 3.68e-01 88.8% 100.0%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 40.0 3.73e-01 76.5% 87.4%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.27e-01 70.4% 47.2%
4ldgA00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.54 40.0 3.08e-01 77.6% 59.3%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 38.0 3.13e-01 76.5% 41.0%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.52 36.0 2.65e-01 71.4% 81.4%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.18e-01 78.6% 44.0%
6ko5A02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 44.0 3.21e-01 96.9% 66.8%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.74e-01 86.7% 74.2%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3639962 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.64 44.0 4.66e-01 70.4% 100.0%
4979815 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.64 46.0 4.81e-01 75.5% 86.7%
3832580 320.4.1.3 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB 0.63 54.0 5.06e-01 96.9% 91.2%
3410614 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.62 45.0 4.42e-01 74.5% 87.6%
4946524 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 4.10e-01 70.4% 65.5%
4964954 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.62 49.0 4.50e-01 85.7% 67.2%
4203701 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.61 44.0 4.06e-01 75.5% 71.3%
3521228 320.4.1.3 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB 0.61 47.0 4.31e-01 84.7% 75.6%
4456198 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 45.0 3.75e-01 80.6% 49.2%
4669669 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.60 44.0 4.31e-01 77.6% 82.7%
4487383 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.60 42.0 4.13e-01 73.5% 81.8%
4442638 320.4.1.1 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain › TIMELESS_C 0.60 49.0 4.54e-01 89.8% 86.4%
4957195 101.1.2.892 ↗ alpha arrays › HTH › HTH › winged helix domain › ArsR 0.59 47.0 4.61e-01 91.8% 81.0%
4969310 101.1.2.892 ↗ alpha arrays › HTH › HTH › winged helix domain › ArsR 0.58 45.0 3.92e-01 89.8% 52.9%
3550851 101.1.2.86 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.58 41.0 4.30e-01 73.5% 100.0%
5062261 101.1.2.892 ↗ alpha arrays › HTH › HTH › winged helix domain › ArsR 0.57 45.0 4.56e-01 92.9% 85.0%
3964741 101.1.2.368 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.57 39.0 3.92e-01 70.4% 74.0%
5011653 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.56 43.0 4.16e-01 81.6% 77.3%
5008022 101.1.2.892 ↗ alpha arrays › HTH › HTH › winged helix domain › ArsR 0.56 44.0 4.47e-01 91.8% 86.0%
4114693 5041.1.1.28 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › PF26135 0.56 38.0 4.40e-01 100.0% 100.0%
4113237 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.55 41.0 4.15e-01 76.5% 81.1%
4593646 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 4.35e-01 80.6% 88.9%
4949226 101.1.2.892 ↗ alpha arrays › HTH › HTH › winged helix domain › ArsR 0.55 44.0 3.80e-01 91.8% 53.8%
5041611 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.55 48.0 3.90e-01 100.0% 55.4%
4061942 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.54 39.0 3.63e-01 74.5% 74.4%
4996402 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.54 38.0 3.87e-01 78.6% 74.7%
4507638 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.54 42.0 3.62e-01 85.7% 50.9%
3604578 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.54 42.0 4.19e-01 86.7% 83.8%
3726854 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 4.32e-01 87.8% 91.0%
4984373 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.54 48.0 3.81e-01 100.0% 53.7%
5028348 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.54 41.0 3.36e-01 83.7% 44.1%
5079787 101.1.2.892 ↗ alpha arrays › HTH › HTH › winged helix domain › ArsR 0.53 39.0 3.45e-01 80.6% 50.7%
3468397 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.53 40.0 3.80e-01 80.6% 89.2%
5011468 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.53 41.0 3.85e-01 84.7% 69.6%
5029277 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.53 42.0 4.15e-01 86.7% 82.9%
4943364 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 3.64e-01 77.6% 74.8%
3422892 101.1.2.24 ↗ alpha arrays › HTH › HTH › winged helix domain › MAGE 0.53 44.0 3.44e-01 93.9% 86.2%
5053109 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.72e-01 86.7% 71.0%
5070883 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.52 42.0 4.32e-01 86.7% 94.4%
5052491 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.52 40.0 3.34e-01 84.7% 56.3%
4598415 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.52 45.0 3.67e-01 100.0% 54.0%
3330019 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.52 41.0 3.96e-01 87.8% 76.5%
4335496 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.52 37.0 3.37e-01 74.5% 70.1%
5035395 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.52 39.0 3.38e-01 83.7% 94.7%
4976807 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.51 40.0 3.73e-01 87.8% 67.2%
5054122 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.51 40.0 3.49e-01 87.8% 53.8%
4992769 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.50 38.0 3.77e-01 87.8% 75.5%
4376160 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.50 39.0 3.35e-01 84.7% 95.8%