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MW824382.1QZI90904.1MYOV064v1_p0054__00054

Bact-Vir

MW824382.1__QZI90904.1__MYOV064v1_p0054__00054

Identity

Accession:: MW824382 ↗
Kingdom:: phage

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_PS15B.4

TaxID: 2859356

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-64

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3kezA03	1.25.40.900	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.76	51.0	4.10e-01	75.0%	35.9%
2gs8A02	3.30.70.890	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain	0.74	61.0	4.63e-01	90.0%	64.3%
2hkeA02	3.30.70.890	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain	0.70	60.0	4.22e-01	98.3%	60.2%
2v6yA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.69	56.0	5.16e-01	85.0%	93.3%
6axfA01	1.20.870.10	Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1	0.67	54.0	4.17e-01	83.3%	55.6%
4k7bA00	1.20.120.1740	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sodium ion translocating NADH-quinone reductase subunit C-like	0.67	55.0	4.38e-01	95.0%	46.8%
2ra1A03	1.20.58.770	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.62	48.0	4.78e-01	83.3%	95.2%
3iieB03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.57	39.0	3.46e-01	71.7%	76.5%
1vhnA02	1.10.1200.80	Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2	0.57	41.0	3.91e-01	76.7%	73.2%
2yxhA00	1.10.287.1080	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like	0.56	47.0	3.89e-01	96.7%	84.1%
4ry9A02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.50	38.0	2.92e-01	86.7%	67.9%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5072052	3718.1.1.0 ↗	alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT	0.76	58.0	5.65e-01	80.0%	93.8%
None	—		0.73	65.0	3.93e-01	98.3%	30.5%
3744055	109.4.1.1129 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRAPPC9-Trs120	0.69	56.0	3.93e-01	85.0%	35.8%
1175575	109.4.1.292 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3a_PCI_TPR-like	0.69	53.0	5.44e-01	81.7%	100.0%
4943613	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.68	56.0	5.42e-01	85.0%	96.9%
3576603	604.12.1.1 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT	0.63	53.0	4.89e-01	91.7%	94.7%
3582304	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.63	53.0	3.70e-01	90.0%	36.6%
3253352	601.33.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain	0.57	47.0	4.40e-01	93.3%	88.0%
5023287	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.56	44.0	4.21e-01	85.0%	87.1%
3470615	3877.1.1.0 ↗	alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC	0.56	44.0	3.01e-01	90.0%	24.2%