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MW824390.1__QZI91308.1__PODOV033v1_p0001__00001
Bact-VirMW824390.1__QZI91308.1__PODOV033v1_p0001__00001
Identity
- Accession:
- MW824390 ↗
- Kingdom:
- phage
Quality
89.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 188-321
Domain cluster:
rep: MK301608.1__AZU99654.1__SBP1_gp062__00062__D776-917
CATH (86)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cd3F00 | 2.60.169.10 | Mainly Beta › Sandwich › Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1 › Microviridae F protein | 0.70 | 64.0 | 4.46e-01 | 100.0% | 94.6% |
| 4ohvA01 | 2.60.120.1030 | Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain | 0.67 | 37.0 | 4.50e-01 | 98.5% | 87.5% |
| 2q30A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 38.0 | 4.54e-01 | 100.0% | 85.2% |
| 6mkbA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 61.0 | 5.74e-01 | 100.0% | 95.0% |
| 1tnrA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 60.0 | 5.87e-01 | 99.3% | 99.3% |
| 1y9qA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 39.0 | 4.53e-01 | 100.0% | 83.9% |
| 1dg6A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 60.0 | 5.83e-01 | 100.0% | 98.7% |
| 3wnoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 45.0 | 5.08e-01 | 92.5% | 95.0% |
| 5j7mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 36.0 | 3.82e-01 | 100.0% | 59.0% |
| 4kkpA02 | 2.60.40.3880 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 48.0 | 5.20e-01 | 92.5% | 92.0% |
| 4jdmA03 | 2.60.120.1340 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 59.0 | 5.69e-01 | 100.0% | 90.3% |
| 1a8mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 58.0 | 5.62e-01 | 100.0% | 95.4% |
| 1alyA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 59.0 | 5.74e-01 | 100.0% | 95.9% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 58.0 | 5.82e-01 | 100.0% | 100.0% |
| 6f2sH01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 58.0 | 4.92e-01 | 100.0% | 83.3% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 56.0 | 5.66e-01 | 100.0% | 97.0% |
| 2vpvA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 38.0 | 4.33e-01 | 100.0% | 83.0% |
| 2d42A01 | 2.170.15.10 | Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › Proaerolysin, chain A, domain 3 | 0.63 | 49.0 | 4.38e-01 | 81.3% | 79.9% |
| 1s55A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 57.0 | 5.42e-01 | 100.0% | 95.5% |
| 1fi2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 40.0 | 3.47e-01 | 99.3% | 42.3% |
| 1rj8A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 57.0 | 5.66e-01 | 100.0% | 97.1% |
| 1umhA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 56.0 | 5.02e-01 | 98.5% | 98.9% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 57.0 | 5.35e-01 | 100.0% | 98.2% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 55.0 | 5.63e-01 | 97.8% | 100.0% |
| 1ex0A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 43.0 | 4.90e-01 | 91.8% | 100.0% |
| 8a28A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 55.0 | 5.47e-01 | 96.3% | 100.0% |
| 4xurA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 55.0 | 5.16e-01 | 96.3% | 100.0% |
| 2wnvD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 57.0 | 5.74e-01 | 99.3% | 100.0% |
| 3lwcA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 36.0 | 3.97e-01 | 100.0% | 72.8% |
| 5bpxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 36.0 | 3.45e-01 | 98.5% | 49.0% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.61 | 46.0 | 4.86e-01 | 91.8% | 89.7% |
| 1w3fA02 | 2.170.15.10 | Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › Proaerolysin, chain A, domain 3 | 0.61 | 47.0 | 4.40e-01 | 81.3% | 83.0% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.61 | 45.0 | 4.70e-01 | 94.8% | 85.0% |
| 2q3zA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 42.0 | 4.82e-01 | 90.3% | 100.0% |
| 2xtlA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.61 | 40.0 | 4.54e-01 | 86.6% | 89.9% |
| 3dgtA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 55.0 | 4.31e-01 | 100.0% | 95.7% |
| 5tpvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 37.0 | 3.71e-01 | 100.0% | 58.7% |
| 5z1aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 46.0 | 4.93e-01 | 94.0% | 92.4% |
| 3es4A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 35.0 | 3.74e-01 | 99.3% | 64.7% |
| 1djxA03 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.60 | 47.0 | 4.77e-01 | 82.8% | 100.0% |
| 7mjrA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 53.0 | 5.41e-01 | 96.3% | 100.0% |
| 2yjlA00 | 2.60.40.2990 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 40.0 | 4.41e-01 | 72.4% | 85.2% |
| 1pgsA02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 54.0 | 4.94e-01 | 100.0% | 90.9% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 54.0 | 5.29e-01 | 99.3% | 98.0% |
| 5jtwB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 43.0 | 4.76e-01 | 94.8% | 96.2% |
| 4o9gA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 36.0 | 3.56e-01 | 100.0% | 56.5% |
| 3fn9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 46.0 | 4.89e-01 | 94.8% | 92.5% |
| 4es8B01 | 2.60.120.1240 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 54.0 | 4.76e-01 | 100.0% | 99.0% |
| 1j3qB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 39.0 | 3.57e-01 | 100.0% | 49.7% |
| 1pgl100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 51.0 | 4.58e-01 | 94.8% | 89.2% |
| 3w57A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.58 | 44.0 | 4.74e-01 | 77.6% | 100.0% |
| 2fqpA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 36.0 | 4.02e-01 | 100.0% | 84.2% |
| 4ypjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.84e-01 | 94.0% | 95.8% |
| 2c9kA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 52.0 | 4.85e-01 | 100.0% | 88.4% |
| 2b39A10 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 45.0 | 4.82e-01 | 97.8% | 96.6% |
| 5m59A06 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 44.0 | 4.77e-01 | 92.5% | 97.3% |
| 3k94A00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.57 | 37.0 | 3.22e-01 | 96.3% | 40.7% |
| 2dmhA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 44.0 | 4.38e-01 | 82.1% | 94.3% |
| 2e26A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 51.0 | 4.87e-01 | 98.5% | 98.7% |
| 5tf0B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.74e-01 | 92.5% | 97.3% |
| 1xf1A03 | 2.60.40.1710 | Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily | 0.56 | 48.0 | 4.91e-01 | 93.3% | 94.7% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.56 | 48.0 | 4.70e-01 | 97.0% | 86.8% |
| 1xvsA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.56 | 44.0 | 4.64e-01 | 93.3% | 91.9% |
| 7a1rA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.56 | 43.0 | 4.55e-01 | 80.6% | 100.0% |
| 2ep6A01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 44.0 | 4.56e-01 | 83.6% | 100.0% |
| 8b38A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 50.0 | 4.22e-01 | 100.0% | 94.7% |
| 6kxkB02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 43.0 | 4.35e-01 | 82.1% | 100.0% |
| 2q7nA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 4.28e-01 | 92.5% | 95.9% |
| 4ag4A02 | 2.60.120.1190 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 49.0 | 4.48e-01 | 100.0% | 98.9% |
| 4qawH03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 47.0 | 4.75e-01 | 100.0% | 94.0% |
| 3butA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 4.44e-01 | 83.6% | 89.6% |
| 6sk6A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 48.0 | 3.84e-01 | 98.5% | 68.1% |
| 3no8A00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.54 | 47.0 | 4.46e-01 | 94.0% | 98.1% |
| 3kwuA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 43.0 | 4.30e-01 | 84.3% | 98.5% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.54 | 47.0 | 4.81e-01 | 95.5% | 100.0% |
| 4k7jA02 | 2.60.120.1360 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 4.71e-01 | 100.0% | 99.2% |
| 4hslA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 33.0 | 3.09e-01 | 97.8% | 47.6% |
| 3gbwA00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.53 | 46.0 | 4.32e-01 | 94.0% | 96.9% |
| 3u4kA00 | 2.60.40.3310 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 4.20e-01 | 94.8% | 90.8% |
| 2y0oA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 38.0 | 3.54e-01 | 99.3% | 60.2% |
| 3hwjA00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.52 | 47.0 | 4.61e-01 | 100.0% | 98.7% |
| 1bev100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 3.70e-01 | 99.3% | 64.9% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 4.26e-01 | 97.8% | 93.2% |
| 2wmpB00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.51 | 42.0 | 4.37e-01 | 100.0% | 97.6% |
| 2p6cA00 | 2.60.120.460 | Mainly Beta › Sandwich › Jelly Rolls › YjbQ-like | 0.51 | 46.0 | 4.64e-01 | 100.0% | 97.1% |
| 1xo8A00 | 2.60.40.1820 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 43.0 | 4.14e-01 | 93.3% | 84.8% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051219 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.72 | 63.0 | 6.44e-01 | 100.0% | 96.9% |
| 4667107 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.69 | 64.0 | 6.24e-01 | 99.3% | 100.0% |
| 5046276 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 49.0 | 5.37e-01 | 93.3% | 88.2% |
| 3881289 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.69 | 64.0 | 6.02e-01 | 100.0% | 91.2% |
| 3512330 | 10.32.1.176 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF3672 | 0.69 | 59.0 | 5.96e-01 | 100.0% | 92.6% |
| 3897855 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.68 | 63.0 | 5.73e-01 | 100.0% | 94.3% |
| 3978761 | 10.32.1.239 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ | 0.68 | 58.0 | 5.99e-01 | 95.5% | 97.6% |
| 4012587 | 10.32.1.232 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 | 0.68 | 62.0 | 5.75e-01 | 100.0% | 82.4% |
| 3563711 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.68 | 48.0 | 4.34e-01 | 100.0% | 53.5% |
| 5044405 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 48.0 | 5.28e-01 | 93.3% | 90.0% |
| 3972098 | 10.32.1.239 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ | 0.67 | 58.0 | 5.83e-01 | 98.5% | 92.6% |
| 3864012 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.67 | 61.0 | 5.61e-01 | 100.0% | 89.1% |
| 3890782 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.66 | 61.0 | 5.97e-01 | 99.3% | 97.9% |
| 3602859 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 41.0 | 4.86e-01 | 78.4% | 92.2% |
| 5079405 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 47.0 | 5.24e-01 | 92.5% | 94.3% |
| 3748555 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.66 | 53.0 | 5.66e-01 | 97.0% | 100.0% |
| 4517189 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.65 | 59.0 | 5.57e-01 | 98.5% | 88.1% |
| 5035506 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 45.0 | 5.25e-01 | 77.6% | 100.0% |
| 3906505 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.65 | 60.0 | 5.88e-01 | 100.0% | 98.6% |
| 3830329 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 49.0 | 4.14e-01 | 92.5% | 46.5% |
| 3543731 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.65 | 58.0 | 5.58e-01 | 100.0% | 85.7% |
| 3893718 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.64 | 59.0 | 5.66e-01 | 100.0% | 99.4% |
| 3511589 | 11.2.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin | 0.64 | 52.0 | 4.30e-01 | 85.1% | 63.0% |
| 5005245 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 58.0 | 4.80e-01 | 97.0% | 79.1% |
| 3540406 | 10.32.1.20 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA | 0.64 | 58.0 | 5.11e-01 | 98.5% | 92.3% |
| 3452090 | 10.2.1.55 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL | 0.64 | 48.0 | 5.25e-01 | 99.3% | 99.0% |
| 151167 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.64 | 58.0 | 5.58e-01 | 100.0% | 96.2% |
| 3901524 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.64 | 59.0 | 5.69e-01 | 100.0% | 98.0% |
| 1884973 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.63 | 58.0 | 5.61e-01 | 100.0% | 91.3% |
| 3941376 | 11.2.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin | 0.63 | 51.0 | 4.97e-01 | 84.3% | 99.3% |
| 4974510 | 11.1.1.1403 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1616 | 0.63 | 46.0 | 4.99e-01 | 94.0% | 91.8% |
| 3898740 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.63 | 57.0 | 5.65e-01 | 100.0% | 95.7% |
| 4305531 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.63 | 56.0 | 5.30e-01 | 94.8% | 94.2% |
| 3654212 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.63 | 47.0 | 4.53e-01 | 79.1% | 100.0% |
| 3937892 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.63 | 50.0 | 4.41e-01 | 83.6% | 88.9% |
| 3880271 | 11.2.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin | 0.63 | 50.0 | 4.22e-01 | 85.1% | 62.2% |
| 3302003 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.62 | 49.0 | 4.38e-01 | 82.8% | 75.7% |
| 2523954 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.62 | 57.0 | 5.40e-01 | 100.0% | 92.4% |
| 4949004 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 56.0 | 5.27e-01 | 97.8% | 100.0% |
| 3874421 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.62 | 57.0 | 5.70e-01 | 100.0% | 95.7% |
| 4186200 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.62 | 56.0 | 5.14e-01 | 99.3% | 96.6% |
| 5081601 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 50.0 | 4.93e-01 | 93.3% | 82.1% |
| 3269628 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 56.0 | 5.19e-01 | 100.0% | 97.6% |
| 5064146 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 54.0 | 5.06e-01 | 95.5% | 77.6% |
| 3307805 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.61 | 56.0 | 5.20e-01 | 100.0% | 92.4% |
| 4996989 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.61 | 45.0 | 4.96e-01 | 84.3% | 96.2% |
| 3591997 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 48.0 | 4.94e-01 | 100.0% | 86.9% |
| 3211348 | 11.2.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin | 0.61 | 49.0 | 4.50e-01 | 85.1% | 76.6% |
| 3108819 | 10.2.1.11 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gemini_coat | 0.61 | 55.0 | 4.74e-01 | 100.0% | 95.3% |
| 3449844 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.61 | 40.0 | 3.46e-01 | 99.3% | 42.9% |
| 3707025 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 55.0 | 5.27e-01 | 100.0% | 99.4% |
| 3507431 | 11.2.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin | 0.61 | 48.0 | 4.06e-01 | 84.3% | 60.9% |
| 3260805 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 53.0 | 4.66e-01 | 94.8% | 100.0% |
| 5029611 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 55.0 | 4.95e-01 | 100.0% | 99.5% |
| 3494689 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 53.0 | 5.18e-01 | 97.0% | 95.3% |
| 4934819 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 52.0 | 5.41e-01 | 99.3% | 100.0% |
| 4665454 | 10.32.1.244 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29989 | 0.60 | 48.0 | 5.10e-01 | 97.8% | 96.6% |
| 5069601 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.60 | 44.0 | 4.79e-01 | 94.0% | 92.7% |
| 3882832 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 53.0 | 5.38e-01 | 98.5% | 97.7% |
| 3639072 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.60 | 46.0 | 4.34e-01 | 81.3% | 100.0% |
| 5038720 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 49.0 | 5.09e-01 | 91.8% | 97.5% |
| 4027866 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.60 | 49.0 | 4.51e-01 | 86.6% | 85.9% |
| 3543120 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.60 | 55.0 | 5.19e-01 | 100.0% | 98.1% |
| 4304353 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.60 | 54.0 | 5.20e-01 | 99.3% | 98.1% |
| 3392961 | 10.2.1.31 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin | 0.60 | 48.0 | 5.09e-01 | 100.0% | 98.3% |
| 5035807 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 54.0 | 5.15e-01 | 100.0% | 94.8% |
| 4278043 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.59 | 46.0 | 4.93e-01 | 92.5% | 96.5% |
| 3949369 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 53.0 | 4.78e-01 | 99.3% | 88.6% |
| 4027864 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.59 | 46.0 | 4.44e-01 | 82.1% | 92.7% |
| 4929344 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 4.63e-01 | 94.8% | 82.1% |
| 3914225 | 10.32.1.283 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TGFb_propeptide | 0.58 | 49.0 | 4.95e-01 | 92.5% | 94.8% |
| 3701456 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 46.0 | 4.17e-01 | 83.6% | 76.1% |
| 3638953 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 46.0 | 3.49e-01 | 84.3% | 41.6% |
| 3873657 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.58 | 51.0 | 4.45e-01 | 100.0% | 66.0% |
| 3700818 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 53.0 | 4.77e-01 | 100.0% | 95.0% |
| 3902712 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.58 | 52.0 | 4.54e-01 | 100.0% | 87.8% |
| 3580968 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.58 | 49.0 | 4.61e-01 | 93.3% | 99.4% |
| 3515983 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.57 | 50.0 | 4.41e-01 | 99.3% | 75.2% |
| 3601675 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.57 | 46.0 | 3.25e-01 | 84.3% | 34.7% |
| 3593920 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 47.0 | 4.93e-01 | 97.8% | 100.0% |
| 3738660 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 44.0 | 4.50e-01 | 82.1% | 100.0% |
| 3789701 | 10.40.1.0 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain | 0.57 | 46.0 | 4.46e-01 | 88.1% | 97.4% |
| 3614827 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.57 | 46.0 | 4.12e-01 | 85.8% | 73.5% |
| 3415694 | 10.40.1.0 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain | 0.57 | 49.0 | 4.68e-01 | 94.0% | 100.0% |
| 3235935 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 46.0 | 4.60e-01 | 85.8% | 96.3% |
| 3230258 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.57 | 52.0 | 4.88e-01 | 100.0% | 96.9% |
| 3285662 | 11.13.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › MspA | 0.57 | 48.0 | 4.39e-01 | 91.8% | 99.4% |
| 5003026 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 4.23e-01 | 92.5% | 77.0% |
| 3241382 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.56 | 48.0 | 4.49e-01 | 93.3% | 96.4% |
| 4021366 | 10.32.1.175 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Rax2_3 | 0.55 | 50.0 | 4.58e-01 | 99.3% | 98.9% |
| 4981720 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 45.0 | 4.53e-01 | 88.1% | 99.3% |
| 3863506 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.55 | 47.0 | 4.39e-01 | 92.5% | 93.3% |
| 5080593 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 47.0 | 4.03e-01 | 95.5% | 95.3% |
| 3474757 | 10.32.1.188 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM181_GOLD | 0.53 | 48.0 | 4.55e-01 | 100.0% | 100.0% |
| 3963972 | 10.32.1.89 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ape1_N | 0.53 | 44.0 | 4.53e-01 | 100.0% | 95.2% |
| 4968195 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 4.30e-01 | 91.8% | 96.8% |
D2
medium
residues 9-75
Domain cluster:
rep: KR296690.1__AKJ74018.1__SP36_46__00046__D2-60
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09327.17 best | Phage_Tail_Tip | 32.2 | 1.10e-07 | 100.0% | 47.5% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.62 | 37.0 | 3.32e-01 | 92.5% | 44.9% |
| 4fdtB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.56 | 39.0 | 2.39e-01 | 71.6% | 93.4% |
| 3jvgA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.55 | 49.0 | 3.63e-01 | 100.0% | 78.6% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 36.0 | 3.04e-01 | 92.5% | 42.0% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 3.80e-01 | 80.6% | 97.3% |
| 3cawA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 31.0 | 2.89e-01 | 94.0% | 44.0% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 44.0 | 2.90e-01 | 100.0% | 57.4% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 30.0 | 2.79e-01 | 91.0% | 41.8% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.17e-01 | 89.6% | 43.5% |
| 3hwuA00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.51 | 41.0 | 3.28e-01 | 91.0% | 47.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2559738 | 79.1.1.9 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer | 0.68 | 59.0 | 3.72e-01 | 98.5% | 18.4% |
| 3928388 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.58 | 34.0 | 2.37e-01 | 88.1% | 18.1% |
| 2817443 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.56 | 42.0 | 2.51e-01 | 80.6% | 33.3% |
| 4009799 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.54 | 33.0 | 2.90e-01 | 91.0% | 40.0% |
| 4988603 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.52 | 42.0 | 2.85e-01 | 95.5% | 70.5% |
| 337177 | 218.1.1.6 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › OSBS_N | 0.51 | 31.0 | 2.97e-01 | 92.5% | 48.2% |
| 3221278 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 38.0 | 2.47e-01 | 79.1% | 49.2% |
| 4990321 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.51 | 41.0 | 2.93e-01 | 94.0% | 61.3% |
| 3698019 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.51 | 37.0 | 2.97e-01 | 80.6% | 75.9% |