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MW824390.1__QZI91314.1__PODOV033v1_p0007__00007
Bact-VirMW824390.1__QZI91314.1__PODOV033v1_p0007__00007
Identity
- Accession:
- MW824390 ↗
- Kingdom:
- phage
Quality
92.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-90
Domain cluster:
rep: OP056089.1__UYD72102.1__X__00002__D5-102
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 30.0 | 3.45e-01 | 89.7% | 71.0% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.53 | 31.0 | 3.52e-01 | 92.0% | 79.0% |
| 4b9wA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 33.0 | 3.16e-01 | 87.4% | 51.9% |
| 2ltsA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 34.0 | 3.48e-01 | 77.0% | 69.8% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.51 | 30.0 | 3.44e-01 | 87.4% | 87.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965202 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.88 | 82.0 | 7.43e-01 | 97.7% | 90.9% |
| 5040518 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 29.0 | 3.43e-01 | 77.0% | 78.0% |
| 3917584 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.56 | 28.0 | 3.11e-01 | 87.4% | 55.7% |
| 3912151 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.54 | 29.0 | 3.23e-01 | 88.5% | 63.2% |
| 3585833 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.54 | 42.0 | 3.94e-01 | 85.1% | 91.8% |
| 3616729 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 42.0 | 3.97e-01 | 85.1% | 77.9% |
| 3218678 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 36.0 | 4.07e-01 | 73.6% | 95.4% |
| 3587082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 27.0 | 3.27e-01 | 85.1% | 75.9% |
| 3328891 | 4.1.1.296 ↗ | beta barrels › SH3 › SH3 › SH3 › TDBD | 0.51 | 33.0 | 3.57e-01 | 80.5% | 84.6% |
| 3574976 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.51 | 32.0 | 3.57e-01 | 97.7% | 96.4% |
| 3791839 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.51 | 33.0 | 3.44e-01 | 97.7% | 72.5% |
| 4992408 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 26.0 | 3.17e-01 | 80.5% | 88.9% |
| 3622643 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.50 | 32.0 | 3.24e-01 | 97.7% | 64.7% |
D2
high
residues 93-194
Domain cluster:
rep: OP056089.1__UYD72102.1__X__00002__D5-102
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13392.13 best | HNH_3 | 35.4 | 8.60e-09 | 43.1% | 87.0% |
D3
medium
residues 196-263
Domain cluster:
rep: NC_054645.1__YP_010053826.1__KGB45_gp61__00061__D97-151