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MW824397.1__QZI91684.1__PODOV088v1_p0023__00023
Bact-VirMW824397.1__QZI91684.1__PODOV088v1_p0023__00023
Identity
- Accession:
- MW824397 ↗
- Kingdom:
- phage
Quality
62.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 703-797
Domain cluster:
rep: MZ643249.1__QYC51789.1__vBPmiSPMCJR_059__00059__D549-643
D2
medium
residues 41-137
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 47.0 | 4.81e-01 | 92.8% | 79.3% |
| 2ba0A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 44.0 | 4.59e-01 | 72.2% | 95.4% |
| 3mxnA01 | 2.40.50.510 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 44.0 | 4.78e-01 | 99.0% | 90.0% |
| 2k52A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 42.0 | 4.69e-01 | 70.1% | 97.3% |
| 3m7nA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 42.0 | 4.48e-01 | 71.1% | 98.8% |
| 4m37A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.61 | 49.0 | 4.10e-01 | 86.6% | 96.5% |
| 3bzcA05 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 45.0 | 4.52e-01 | 92.8% | 86.5% |
| 1id2A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 41.0 | 4.00e-01 | 91.8% | 69.8% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 38.0 | 4.23e-01 | 72.2% | 100.0% |
| 3f8tA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 41.0 | 4.39e-01 | 97.9% | 95.0% |
| 5oynA01 | 3.50.30.80 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › IlvD/EDD C-terminal domain-like | 0.55 | 39.0 | 3.30e-01 | 74.2% | 80.4% |
| 3g5wA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.52 | 42.0 | 3.60e-01 | 88.7% | 63.9% |
| 1gskA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.52 | 42.0 | 3.60e-01 | 88.7% | 79.2% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 4.61e-01 | 97.9% | 100.0% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 4.34e-01 | 99.0% | 97.8% |
| 4f7kA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 42.0 | 3.86e-01 | 90.7% | 80.0% |
| 1f35A00 | 2.60.120.390 | Mainly Beta › Sandwich › Jelly Rolls › Olfactory marker | 0.50 | 37.0 | 3.22e-01 | 79.4% | 91.4% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043741 | 2.1.1.21 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 | 0.68 | 46.0 | 5.10e-01 | 94.8% | 90.7% |
| 5026606 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 41.0 | 4.73e-01 | 92.8% | 91.4% |
| 3622421 | 2.1.1.217 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_DEPS-1_3rd | 0.61 | 38.0 | 4.41e-01 | 70.1% | 87.1% |
| 4943514 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 44.0 | 4.74e-01 | 92.8% | 91.3% |
| 3578306 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 37.0 | 4.16e-01 | 94.8% | 81.3% |
| 3252917 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 40.0 | 4.42e-01 | 70.1% | 98.7% |
| 3403141 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.58 | 42.0 | 4.58e-01 | 91.8% | 97.3% |
| 4945258 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.58 | 45.0 | 4.65e-01 | 94.8% | 88.9% |
| 5024136 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.56 | 45.0 | 4.11e-01 | 96.9% | 64.4% |
| 2581338 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.56 | 47.0 | 4.79e-01 | 93.8% | 97.9% |
| 3744260 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.55 | 44.0 | 4.66e-01 | 93.8% | 98.8% |
| 4114579 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.55 | 44.0 | 4.66e-01 | 92.8% | 100.0% |
| 4886517 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.54 | 44.0 | 4.08e-01 | 92.8% | 68.8% |
| 5058096 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.54 | 43.0 | 4.56e-01 | 92.8% | 98.8% |
| 2581339 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.54 | 47.0 | 4.79e-01 | 93.8% | 97.9% |
| 5040472 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.54 | 37.0 | 4.01e-01 | 87.6% | 86.3% |
| 4669771 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 38.0 | 4.11e-01 | 95.9% | 90.0% |
| 4093810 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.53 | 42.0 | 4.06e-01 | 92.8% | 74.5% |
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.53 | 46.0 | 4.68e-01 | 92.8% | 100.0% |
| 4100241 | 2.1.1.113 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CvfB_2nd | 0.53 | 41.0 | 4.33e-01 | 84.5% | 94.1% |
| 5056065 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.53 | 38.0 | 3.80e-01 | 94.8% | 73.0% |
| 4959594 | 3156.1.1.13 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 | 0.53 | 34.0 | 3.70e-01 | 87.6% | 82.7% |
| 5058404 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 42.0 | 4.07e-01 | 95.9% | 77.3% |
| 3291538 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.52 | 36.0 | 3.85e-01 | 88.7% | 82.4% |
| 5049738 | 2.1.1.94 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TLP1_add_C | 0.52 | 39.0 | 4.20e-01 | 78.4% | 98.8% |
| 3255830 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.52 | 44.0 | 4.44e-01 | 94.8% | 99.0% |
| 3818376 | 1.1.11.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 | 0.52 | 43.0 | 4.06e-01 | 90.7% | 88.7% |
| 3214209 | 2.1.1.224 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 | 0.51 | 40.0 | 3.84e-01 | 96.9% | 71.3% |
| 4102465 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 42.0 | 4.14e-01 | 96.9% | 85.6% |
| 5059842 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 42.0 | 4.22e-01 | 94.8% | 95.0% |
| 3276401 | 5.1.3.149 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 | 0.50 | 39.0 | 2.84e-01 | 86.6% | 32.5% |
D3
medium
residues 185-209_256-305