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MW824404.1__QZI92060.1__PODOV045v1_p0018__00018

Bact-Vir

MW824404.1__QZI92060.1__PODOV045v1_p0018__00018

Identity

Accession:
MW824404 ↗
Kingdom:
phage

Quality

85.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 28-86
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23984.2 best DUF7307 33.7 4.70e-08 100.0% 42.0%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.23e-01 79.7% 100.0%
1ka1A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.61 46.0 3.14e-01 81.4% 68.5%
1eluA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 44.0 3.44e-01 78.0% 46.1%
1lshB00 2.20.90.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain 0.56 47.0 3.33e-01 86.4% 67.2%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.09e-01 76.3% 38.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3193632 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.75 56.0 3.22e-01 79.7% 17.5%
3943344 183.1.1.0 alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain 0.70 57.0 4.31e-01 89.8% 55.0%
3612298 3279.1.1.0 alpha arrays › Helical domain in 5'->3' exoribonucleases › Helical domain in 5'->3' exoribonucleases › Helical domain in 5'->3' exoribonucleases 0.55 39.0 2.69e-01 74.6% 61.9%