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MW824405.1__QZI92106.1__PODOV047v2_p0018__00018

Bact-Vir

MW824405.1__QZI92106.1__PODOV047v2_p0018__00018

Identity

Accession:
MW824405 ↗
Kingdom:
phage

Quality

86.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_75E35.1

TaxID: 2859346

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 311-477
PDB
Domain cluster: rep: NC_048679.1__YP_009835549.1__HWB34_gp74__00074__D9-156
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05869.17 best Dam 116.6 1.30e-33 100.0% 86.4%
D2 medium residues 1-179
PDB
Domain cluster: rep: IMGVR_UViG_3300006225_000053-3300006225-Ga0082206_10217914__D28-177
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01507.26 best PAPS_reduct 34.7 2.60e-08 90.5% 33.7%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1surA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.79 67.0 6.25e-01 100.0% 74.0%
2oq2D00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.76 68.0 6.04e-01 100.0% 68.3%
4bwvA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.75 65.0 5.98e-01 100.0% 71.8%
3a2kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.75 49.0 5.58e-01 85.5% 87.4%
2goyA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 66.0 6.09e-01 100.0% 74.8%
1xngA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 61.0 5.45e-01 100.0% 63.2%
3vrhA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.72 65.0 5.36e-01 100.0% 57.0%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.71 63.0 5.85e-01 100.0% 77.0%
3n05A02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 61.0 6.05e-01 100.0% 88.4%
1kqpA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 62.0 5.30e-01 100.0% 62.4%
2vxoA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 65.0 6.04e-01 100.0% 86.0%
1zunA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 60.0 5.89e-01 100.0% 87.5%
3sdbA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 58.0 5.55e-01 100.0% 81.6%
3tnjA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 43.0 5.04e-01 91.1% 98.3%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 35.0 3.70e-01 76.5% 58.4%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 43.0 4.98e-01 92.7% 97.7%
4xfjB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 55.0 5.61e-01 100.0% 98.3%
4wnyA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 43.0 5.01e-01 90.5% 97.7%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 43.0 4.83e-01 87.2% 93.3%
3gybA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 32.0 3.76e-01 93.3% 74.8%
2jjmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 41.0 4.13e-01 92.2% 70.4%
2hdoA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 43.0 4.77e-01 89.4% 95.8%
2vchA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 49.0 4.34e-01 89.9% 89.9%
2z3vA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 42.0 4.80e-01 87.2% 98.5%
2ah5A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 43.0 4.68e-01 89.4% 94.4%
7mi0A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 42.0 4.14e-01 89.9% 71.0%
2ybdA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 42.0 4.63e-01 89.9% 93.8%
2ielA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 41.0 4.66e-01 92.7% 100.0%
1jmvA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 43.0 4.80e-01 92.2% 100.0%
3s3tA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 44.0 4.81e-01 87.2% 97.9%
7bv3A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 50.0 4.45e-01 95.0% 91.8%
2g8lA03 3.40.50.10880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein PF01937, DUF89, domain 3 0.55 39.0 4.25e-01 91.1% 85.4%
3db2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 37.0 4.18e-01 88.8% 87.1%
2p6pB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 46.0 4.43e-01 89.9% 91.0%
3cisH00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 42.0 3.58e-01 89.9% 50.0%
3q3eA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 41.0 4.05e-01 89.4% 72.3%
3hgmA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 43.0 4.67e-01 86.6% 99.3%
1q74B00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.54 49.0 4.28e-01 100.0% 85.2%
2jaxA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 40.0 4.49e-01 89.9% 99.3%
5l3sB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 48.0 4.56e-01 95.0% 89.0%
2yjnA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.54 46.0 4.19e-01 92.7% 92.7%
1peaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 47.0 4.76e-01 93.9% 98.3%
7xr9B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 37.0 4.07e-01 88.3% 85.8%
5l3qA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 47.0 4.53e-01 96.6% 89.3%
4c7oA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 47.0 4.64e-01 96.6% 96.9%
4mixA00 3.90.550.20 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.52 44.0 3.81e-01 89.4% 88.8%
1shuX00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.52 42.0 4.23e-01 84.4% 93.9%
2bo4A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.51 44.0 4.31e-01 89.9% 93.8%
5bmoC00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.51 47.0 4.27e-01 100.0% 80.6%
3moiA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 37.0 3.74e-01 88.8% 74.3%
3ab8A00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 43.0 3.81e-01 89.9% 87.4%
4uulA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 40.0 4.36e-01 85.5% 98.0%
3uykA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 45.0 4.34e-01 92.2% 87.8%
3do6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 46.0 3.80e-01 97.2% 77.4%
2gmhA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 44.0 3.88e-01 93.9% 92.7%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3603161 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.84 73.0 6.22e-01 100.0% 60.4%
4005131 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.79 67.0 6.03e-01 100.0% 66.3%
5003321 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.79 69.0 5.81e-01 100.0% 57.5%
3489889 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.78 54.0 5.71e-01 82.1% 78.8%
3690089 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.78 68.0 5.89e-01 100.0% 62.3%
4052133 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.77 67.0 5.97e-01 100.0% 67.1%
5012450 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.77 63.0 5.68e-01 100.0% 64.3%
1122392 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.75 65.0 5.98e-01 100.0% 71.8%
5042069 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.75 63.0 5.52e-01 100.0% 62.4%
3603384 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.74 63.0 5.63e-01 100.0% 65.8%
4635446 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.74 65.0 5.92e-01 100.0% 71.7%
5041746 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.74 68.0 5.77e-01 100.0% 62.9%
None — 0.74 65.0 6.47e-01 100.0% 89.7%
4973517 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.73 60.0 6.15e-01 100.0% 88.0%
3385512 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.73 65.0 5.81e-01 100.0% 68.6%
5035814 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.73 67.0 5.60e-01 100.0% 60.0%
4582525 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.73 64.0 5.77e-01 100.0% 70.2%
4147679 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.73 64.0 5.84e-01 100.0% 72.2%
4614930 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.73 64.0 5.80e-01 100.0% 70.6%
4499405 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.73 64.0 5.67e-01 100.0% 67.3%
4678704 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.72 64.0 5.81e-01 100.0% 71.1%
3339632 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.72 65.0 5.74e-01 100.0% 67.6%
4337374 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.72 64.0 5.81e-01 100.0% 71.1%
3590102 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.72 63.0 5.64e-01 100.0% 68.3%
4141794 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.72 63.0 5.66e-01 100.0% 68.8%
4994415 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.72 67.0 6.02e-01 100.0% 73.8%
None — 0.72 65.0 5.79e-01 100.0% 69.8%
4203886 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 65.0 5.57e-01 100.0% 64.2%
5027047 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 67.0 5.89e-01 100.0% 70.2%
5035964 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 67.0 5.62e-01 100.0% 63.4%
5011726 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 68.0 5.67e-01 100.0% 63.9%
4328387 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 63.0 5.70e-01 100.0% 71.1%
4051591 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 62.0 5.58e-01 100.0% 69.4%
4234668 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 63.0 5.71e-01 100.0% 72.2%
4425942 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 64.0 5.31e-01 100.0% 57.6%
3604580 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 58.0 6.12e-01 100.0% 95.6%
4885769 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 64.0 5.76e-01 100.0% 72.3%
3602945 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 67.0 5.66e-01 100.0% 72.1%
4954825 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 64.0 5.71e-01 100.0% 70.8%
3174284 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 67.0 5.38e-01 100.0% 56.6%
4383441 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 67.0 5.50e-01 100.0% 60.3%
3973558 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.70 67.0 5.14e-01 100.0% 53.8%
4611545 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.70 62.0 5.64e-01 100.0% 71.7%
4322077 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.70 60.0 5.51e-01 100.0% 70.7%
4971349 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.70 67.0 5.70e-01 100.0% 68.9%
4312317 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.70 65.0 5.82e-01 100.0% 72.9%
4346140 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.70 63.0 5.66e-01 100.0% 71.2%
5021367 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.70 66.0 5.48e-01 100.0% 71.5%
5066233 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.70 65.0 5.47e-01 100.0% 62.5%
4301950 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.70 61.0 5.53e-01 100.0% 70.2%
4124153 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.70 66.0 5.43e-01 100.0% 60.0%
5049776 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.70 66.0 5.54e-01 100.0% 74.4%
3989136 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.70 59.0 5.43e-01 100.0% 71.4%
5029545 2005.1.1.108 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF30497 0.69 65.0 5.27e-01 100.0% 57.2%
4666487 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.69 65.0 5.60e-01 100.0% 67.4%
4167294 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.69 62.0 5.46e-01 100.0% 67.6%
4462073 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.69 65.0 5.35e-01 100.0% 59.7%
3741392 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.69 65.0 5.77e-01 100.0% 74.7%
4052372 2005.1.1.18 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.68 61.0 5.29e-01 100.0% 64.2%
4286560 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.68 60.0 5.47e-01 100.0% 72.2%
5033584 2005.1.1.108 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF30497 0.68 64.0 5.03e-01 100.0% 52.9%
3970680 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.68 46.0 5.49e-01 91.1% 99.2%
5024294 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.68 64.0 5.51e-01 100.0% 67.2%
5004524 2005.1.1.23 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.67 63.0 5.19e-01 100.0% 72.6%
4145378 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.67 62.0 5.67e-01 100.0% 76.5%
5000403 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.67 63.0 5.22e-01 100.0% 61.2%
4656730 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.67 63.0 5.46e-01 100.0% 72.5%
4033672 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.66 48.0 5.53e-01 99.4% 99.3%
4453324 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.66 61.0 5.46e-01 100.0% 71.8%
4990263 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.66 45.0 5.17e-01 87.2% 92.5%
5024053 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.65 58.0 5.59e-01 100.0% 85.0%
4042811 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.64 60.0 4.73e-01 100.0% 61.7%
3982277 2005.1.1.14 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.63 56.0 5.25e-01 92.7% 90.0%
4999072 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.63 35.0 4.09e-01 81.0% 74.6%
384421 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.61 43.0 4.91e-01 93.9% 97.7%
4241012 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.60 56.0 5.18e-01 100.0% 87.1%
4538553 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.60 56.0 5.23e-01 100.0% 90.7%
3281499 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.60 55.0 5.15e-01 100.0% 80.9%
5039199 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.59 43.0 4.60e-01 93.3% 85.8%
4099547 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.59 45.0 5.01e-01 91.1% 98.6%
3263234 300.1.1.17 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2, PLDc_3 0.58 40.0 3.76e-01 84.4% 56.9%
4007584 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.56 40.0 4.04e-01 89.9% 72.2%
4997388 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.56 47.0 3.75e-01 91.1% 68.6%
4945956 2004.1.1.43 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRP54 0.54 48.0 4.56e-01 95.0% 90.0%
4997454 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.53 47.0 4.40e-01 93.3% 94.4%
3535081 7585.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.51 35.0 3.86e-01 95.0% 88.6%
3279544 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.50 43.0 3.62e-01 91.6% 67.1%
D3 medium residues 180-273
PDB
Domain cluster: rep: MW865312.1__QZI86477.1__SIPHO018v1_30001__00001__D30-105
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bqnA02 1.10.10.2490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 44.0 3.99e-01 88.3% 97.6%
3rmqA02 6.10.140.1650 Special › Helix non-globular › Helix Hairpins › 0.51 30.0 3.59e-01 70.2% 94.6%
3t33A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.50 40.0 2.72e-01 89.4% 24.6%
5iduC03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.50 34.0 3.01e-01 72.3% 82.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4960327 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 42.0 2.73e-01 76.6% 20.9%
145205 170.2.1.1 ↗ alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › Gag_p24 0.56 39.0 3.37e-01 72.3% 59.1%
3264716 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.54 38.0 3.26e-01 73.4% 59.5%
4023888 109.3.1.177 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Clathrin 0.50 32.0 2.73e-01 73.4% 38.1%