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MW824406.1__QZI92141.1__PODOV073v1_p0016__00016
Bact-VirMW824406.1__QZI92141.1__PODOV073v1_p0016__00016
Identity
- Accession:
- MW824406 ↗
- Kingdom:
- phage
Quality
86.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-124
Domain cluster:
rep: NC_027397.1__YP_009153046.1__ACQ41_gp20__00020__D9-117
D2
high
residues 257-338
Domain cluster:
rep: NC_027399.1__YP_010843565.1__ACQ27_gp681__00681__D340-426
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pgbA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.61 | 47.0 | 2.93e-01 | 85.4% | 62.5% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 4.13e-01 | 100.0% | 90.9% |
| 1vwxf00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.59 | 51.0 | 4.70e-01 | 100.0% | 94.5% |
| 5c86A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 51.0 | 4.79e-01 | 100.0% | 83.2% |
| 2im9A02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.57 | 49.0 | 4.14e-01 | 100.0% | 89.1% |
| 1loxA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.56 | 42.0 | 3.84e-01 | 82.9% | 59.5% |
| 2jwyA01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.56 | 49.0 | 4.18e-01 | 98.8% | 85.9% |
| 2hr0B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 48.0 | 4.40e-01 | 97.6% | 82.6% |
| 2v5yA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.22e-01 | 97.6% | 75.3% |
| 5nfiB02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 3.60e-01 | 84.1% | 56.4% |
| 1mkfA02 | 2.60.40.1340 | Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like | 0.54 | 46.0 | 3.75e-01 | 100.0% | 91.9% |
| 1uenA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 4.12e-01 | 100.0% | 68.8% |
| 6tr4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 44.0 | 3.80e-01 | 100.0% | 56.5% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 43.0 | 3.69e-01 | 100.0% | 52.1% |
| 2w5fB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 46.0 | 3.87e-01 | 100.0% | 55.9% |
| 2yh9B00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.54 | 31.0 | 3.38e-01 | 85.4% | 67.6% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 44.0 | 3.99e-01 | 100.0% | 67.3% |
| 2zaiA04 | 2.60.40.3030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 3.97e-01 | 100.0% | 99.2% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.93e-01 | 100.0% | 98.5% |
| 6nwmA01 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.53 | 43.0 | 3.54e-01 | 100.0% | 47.7% |
| 2ae0X01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.53 | 46.0 | 3.63e-01 | 100.0% | 62.2% |
| 2vrqA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 44.0 | 3.93e-01 | 100.0% | 63.6% |
| 3no8A00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.53 | 46.0 | 3.76e-01 | 100.0% | 51.6% |
| 2byfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 44.0 | 4.16e-01 | 98.8% | 89.7% |
| 2d73A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 44.0 | 4.04e-01 | 100.0% | 69.0% |
| 1qw9A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 44.0 | 3.91e-01 | 100.0% | 61.7% |
| 2khaA01 | 2.60.40.2140 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-glucan-recognition protein, N-terminal domain | 0.53 | 43.0 | 4.07e-01 | 91.5% | 75.2% |
| 2bgoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 4.06e-01 | 98.8% | 100.0% |
| 4rd7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 43.0 | 3.79e-01 | 100.0% | 62.2% |
| 1ex0A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 45.0 | 4.08e-01 | 97.6% | 85.1% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.27e-01 | 100.0% | 70.1% |
| 7zvmA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 43.0 | 4.04e-01 | 100.0% | 73.5% |
| 3ci0J02 | 2.10.70.20 | Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains | 0.52 | 26.0 | 3.07e-01 | 100.0% | 72.0% |
| 4pw3A01 | 3.90.420.10 | Alpha Beta › Alpha-Beta Complex › Sulfite Oxidase; Chain A, domain 2 › Oxidoreductase, molybdopterin-binding domain | 0.52 | 44.0 | 3.22e-01 | 98.8% | 62.7% |
| 4ojdH03 | 2.60.40.3980 | Mainly Beta › Sandwich › Immunoglobulin-like › Cell-cell fusogen EFF/AFF, domain 3 | 0.52 | 45.0 | 4.17e-01 | 100.0% | 77.9% |
| 4e2gC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 41.0 | 3.63e-01 | 100.0% | 57.9% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 44.0 | 3.71e-01 | 100.0% | 58.5% |
| 3th1C00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.51 | 44.0 | 3.24e-01 | 100.0% | 51.7% |
| 2hevF00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 3.91e-01 | 100.0% | 93.7% |
| 4iltC00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.51 | 42.0 | 3.54e-01 | 97.6% | 65.8% |
| 1x9tA02 | 3.90.1620.10 | Alpha Beta › Alpha-Beta Complex › adenovirus 2 penton base, domain 2 › adenovirus 2 penton base, domain 2 | 0.50 | 34.0 | 2.47e-01 | 70.7% | 43.2% |
| 3fq4B01 | 2.60.40.2030 | Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain | 0.50 | 42.0 | 3.86e-01 | 97.6% | 78.4% |
| 1qwrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 38.0 | 3.71e-01 | 100.0% | 75.3% |
| 2x41A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 3.56e-01 | 89.0% | 83.2% |
| 3dhpA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 42.0 | 4.07e-01 | 92.7% | 97.8% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943848 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.88 | 82.0 | 7.59e-01 | 100.0% | 95.0% |
| 1714452 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.75 | 69.0 | 6.76e-01 | 100.0% | 97.7% |
| 1954233 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.73 | 66.0 | 6.48e-01 | 100.0% | 97.8% |
| 3299532 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 53.0 | 4.92e-01 | 100.0% | 97.3% |
| 4969629 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 45.0 | 4.29e-01 | 84.1% | 71.0% |
| 4324042 | 11.1.4.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › fn3_3 | 0.58 | 44.0 | 4.12e-01 | 84.1% | 67.0% |
| 5060622 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.57 | 43.0 | 4.08e-01 | 84.1% | 74.3% |
| 4669788 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.57 | 47.0 | 4.10e-01 | 93.9% | 83.8% |
| 3879431 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.51e-01 | 100.0% | 81.9% |
| 3921542 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.56 | 49.0 | 3.73e-01 | 100.0% | 41.0% |
| 3925162 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.56 | 49.0 | 4.51e-01 | 100.0% | 77.3% |
| 4980545 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 43.0 | 4.19e-01 | 85.4% | 73.7% |
| 3624575 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.56 | 49.0 | 4.37e-01 | 100.0% | 71.7% |
| 3333822 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.56 | 48.0 | 3.85e-01 | 100.0% | 82.9% |
| 5012252 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 48.0 | 4.42e-01 | 98.8% | 85.5% |
| 3483323 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 47.0 | 3.39e-01 | 100.0% | 92.0% |
| 4396355 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.55 | 45.0 | 4.49e-01 | 100.0% | 85.9% |
| 5074211 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.55 | 48.0 | 4.19e-01 | 100.0% | 65.0% |
| 4013577 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 48.0 | 3.79e-01 | 100.0% | 47.6% |
| 1412423 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.54 | 47.0 | 4.16e-01 | 100.0% | 68.5% |
| 1030893 | 11.26.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Viral chemokine binding protein m3 › Viral chemokine binding protein m3 › M3 | 0.54 | 46.0 | 3.74e-01 | 100.0% | 91.3% |
| 3723768 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 47.0 | 4.58e-01 | 100.0% | 94.4% |
| 4003316 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.54 | 48.0 | 4.20e-01 | 100.0% | 77.6% |
| 3585284 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.54 | 46.0 | 3.62e-01 | 100.0% | 56.3% |
| 3956351 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.54 | 40.0 | 2.59e-01 | 84.1% | 92.2% |
| 3403486 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 4.24e-01 | 98.8% | 84.5% |
| 3483414 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.78e-01 | 92.7% | 67.4% |
| 3909339 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.53 | 45.0 | 4.31e-01 | 100.0% | 80.0% |
| 3505893 | 10.12.1.21 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ERG2_Sigma1R | 0.53 | 43.0 | 3.72e-01 | 100.0% | 56.2% |
| 4532823 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.53 | 44.0 | 3.88e-01 | 97.6% | 88.7% |
| 4575757 | 12.1.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C | 0.53 | 43.0 | 4.03e-01 | 95.1% | 80.0% |
| 3768151 | 11.1.1.400 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M,A2M_BRD,MG4,MG3 | 0.53 | 45.0 | 2.78e-01 | 97.6% | 18.7% |
| 3639368 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.53 | 43.0 | 3.99e-01 | 95.1% | 98.2% |
| 3875464 | 11.1.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M,A2M_BRD | 0.53 | 45.0 | 2.85e-01 | 100.0% | 20.0% |
| 134743 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 44.0 | 3.99e-01 | 100.0% | 67.5% |
| 3307642 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.52 | 44.0 | 3.58e-01 | 100.0% | 96.1% |
| 4960961 | 11.1.1.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Calx-beta | 0.52 | 42.0 | 3.91e-01 | 92.7% | 81.8% |
| 3907540 | 10.32.1.188 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM181_GOLD | 0.52 | 45.0 | 4.00e-01 | 100.0% | 85.6% |
| 4628494 | 12.1.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C | 0.52 | 42.0 | 3.93e-01 | 97.6% | 91.2% |
| 4285094 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 43.0 | 3.99e-01 | 98.8% | 91.2% |
| 3685657 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.52 | 44.0 | 3.81e-01 | 97.6% | 81.5% |
| 371073 | 11.1.1.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Calx-beta | 0.51 | 43.0 | 4.09e-01 | 97.6% | 82.5% |
| 3788318 | 10.32.1.17 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Allantoicase | 0.51 | 44.0 | 3.72e-01 | 100.0% | 58.7% |
| 3398840 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 43.0 | 4.05e-01 | 100.0% | 80.0% |
| 4027417 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 35.0 | 3.70e-01 | 70.7% | 97.1% |
| 3223695 | 11.1.1.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Calx-beta | 0.51 | 41.0 | 3.62e-01 | 92.7% | 74.6% |
| 3175048 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.51 | 43.0 | 3.51e-01 | 100.0% | 79.8% |
| 3919532 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 44.0 | 4.03e-01 | 100.0% | 77.3% |
| 4959655 | 11.1.1.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Calx-beta | 0.50 | 42.0 | 3.96e-01 | 97.6% | 83.8% |
| 366073 | 11.1.1.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Calx-beta | 0.50 | 42.0 | 3.86e-01 | 97.6% | 78.4% |
| 4943899 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 3.93e-01 | 98.8% | 96.4% |
| 3743730 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 40.0 | 4.13e-01 | 100.0% | 97.3% |
D3
high
residues 822-866
Domain cluster:
rep: IMGVR_UViG_3300029442_000004-3300029442-Ga0239579_100012778__D41-86
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cg7A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.67 | 48.0 | 4.82e-01 | 88.9% | 78.3% |
| 1v47A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.66 | 54.0 | 4.02e-01 | 100.0% | 94.0% |
| 3mqgA02 | 2.20.70.110 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.66 | 45.0 | 4.74e-01 | 91.1% | 84.6% |
| 1a3wB03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.66 | 56.0 | 4.37e-01 | 95.6% | 77.3% |
| 1jdpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 53.0 | 3.68e-01 | 100.0% | 33.0% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.64 | 52.0 | 4.04e-01 | 100.0% | 40.4% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 46.0 | 4.52e-01 | 80.0% | 91.7% |
| 1h9oA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.63 | 52.0 | 4.05e-01 | 100.0% | 44.4% |
| 2k6pA00 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.63 | 52.0 | 4.28e-01 | 95.6% | 94.0% |
| 3ijmA00 | 3.90.1570.20 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.62 | 52.0 | 3.74e-01 | 100.0% | 37.0% |
| 2pbfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 51.0 | 3.38e-01 | 100.0% | 22.5% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.61 | 49.0 | 4.50e-01 | 97.8% | 93.9% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.60 | 46.0 | 2.73e-01 | 84.4% | 13.7% |
| 1llnA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.59 | 50.0 | 3.41e-01 | 100.0% | 42.3% |
| 2apoA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.58 | 45.0 | 3.78e-01 | 97.8% | 71.7% |
| 4omfA00 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.58 | 46.0 | 2.74e-01 | 91.1% | 73.0% |
| 6u8yL01 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.57 | 44.0 | 2.68e-01 | 91.1% | 74.3% |
| 3ihgA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.57 | 47.0 | 3.44e-01 | 100.0% | 59.3% |
| 5mawD00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.56 | 43.0 | 2.76e-01 | 88.9% | 66.9% |
| 4tl8F00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 49.0 | 3.18e-01 | 100.0% | 81.2% |
| 1lp8A01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.55 | 46.0 | 3.16e-01 | 100.0% | 42.0% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.74e-01 | 100.0% | 90.4% |
| 4obmA00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.53 | 37.0 | 2.39e-01 | 75.6% | 69.4% |
| 2dr3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 45.0 | 2.86e-01 | 100.0% | 81.0% |
| 3jzmA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 44.0 | 2.81e-01 | 100.0% | 73.8% |
| 2w0mA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 45.0 | 2.90e-01 | 100.0% | 79.5% |
| 5l3sB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 41.0 | 2.77e-01 | 95.6% | 22.4% |
| 6khjH01 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.51 | 38.0 | 2.35e-01 | 91.1% | 75.2% |
| 2ymaA00 | 3.10.310.60 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.51 | 38.0 | 3.03e-01 | 100.0% | 61.5% |
| 3r74B02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 36.0 | 2.52e-01 | 82.2% | 46.4% |
| 8e9gD01 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.51 | 38.0 | 2.33e-01 | 93.3% | 73.1% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 34.0 | 3.12e-01 | 73.3% | 49.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3505939 | 270.1.1.1 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Pur_DNA_glyco | 0.76 | 58.0 | 4.36e-01 | 84.4% | 43.6% |
| 4150492 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 61.0 | 3.86e-01 | 100.0% | 25.4% |
| 3264848 | 2492.1.1.36 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › ODR4-like | 0.71 | 62.0 | 4.18e-01 | 100.0% | 38.2% |
| 5053690 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.70 | 59.0 | 4.16e-01 | 100.0% | 37.7% |
| 3390132 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.69 | 58.0 | 4.01e-01 | 100.0% | 33.9% |
| 4377115 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.67 | 56.0 | 3.01e-01 | 100.0% | 5.0% |
| 4072878 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.67 | 56.0 | 4.77e-01 | 100.0% | 72.5% |
| 3932894 | 2492.1.1.36 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › ODR4-like | 0.66 | 55.0 | 3.96e-01 | 100.0% | 43.3% |
| 4888405 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.66 | 49.0 | 3.70e-01 | 91.1% | 32.2% |
| 3481114 | 372.2.1.0 ↗ | a+b complex topology › RNase A-like › EndoU-like › EndoU-like | 0.65 | 53.0 | 3.37e-01 | 97.8% | 100.0% |
| 4344650 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.65 | 53.0 | 4.22e-01 | 97.8% | 96.0% |
| 3623169 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.64 | 54.0 | 4.21e-01 | 100.0% | 44.8% |
| 3781932 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.64 | 53.0 | 3.14e-01 | 100.0% | 19.3% |
| 2161972 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 52.0 | 4.42e-01 | 100.0% | 75.9% |
| 5044837 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 48.0 | 4.46e-01 | 88.9% | 70.0% |
| 3774694 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.61 | 53.0 | 3.56e-01 | 100.0% | 28.3% |
| 169 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.61 | 49.0 | 4.50e-01 | 97.8% | 93.9% |
| 4950268 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.60 | 43.0 | 4.02e-01 | 82.2% | 73.3% |
| 3930641 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.59 | 48.0 | 3.86e-01 | 100.0% | 45.7% |
| 4969998 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.58 | 46.0 | 4.15e-01 | 97.8% | 94.2% |
| 3729836 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.57 | 46.0 | 3.45e-01 | 97.8% | 56.3% |
| 4100600 | 109.46.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) | 0.55 | 47.0 | 2.79e-01 | 97.8% | 20.5% |
| 4059465 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.53 | 42.0 | 3.73e-01 | 91.1% | 67.6% |
| 5012111 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.52 | 41.0 | 2.89e-01 | 100.0% | 90.8% |
D4
medium
residues 172-253_341-427
Domain cluster:
rep: CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00328__D166-268_372-421
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eqnA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.85 | 82.0 | 6.17e-01 | 100.0% | 57.2% |
| 3zppA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.84 | 81.0 | 5.81e-01 | 100.0% | 50.6% |
| 4oj6C03 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 78.0 | 5.74e-01 | 99.4% | 65.1% |
| 7chuA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 79.0 | 5.94e-01 | 100.0% | 49.7% |
| 2pygA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 78.0 | 5.82e-01 | 99.4% | 47.9% |
| 7b7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 78.0 | 5.81e-01 | 99.4% | 47.5% |
| 3eqnA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 78.0 | 6.00e-01 | 100.0% | 58.2% |
| 1h80B00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 78.0 | 5.59e-01 | 100.0% | 41.9% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 77.0 | 5.31e-01 | 100.0% | 40.7% |
| 5olpA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 77.0 | 5.53e-01 | 100.0% | 49.5% |
| 1rmgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 77.0 | 5.56e-01 | 100.0% | 44.5% |
| 2uvfB02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 77.0 | 5.45e-01 | 100.0% | 51.9% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.80 | 77.0 | 6.84e-01 | 100.0% | 81.0% |
| 3jurA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.80 | 77.0 | 5.46e-01 | 100.0% | 49.8% |
| 4c2lA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 72.0 | 5.42e-01 | 100.0% | 54.6% |
| 1jtaA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 71.0 | 5.35e-01 | 100.0% | 54.0% |
| 4hwvB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 70.0 | 4.90e-01 | 100.0% | 57.9% |
| 7o7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 69.0 | 5.16e-01 | 100.0% | 47.3% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.72 | 49.0 | 5.06e-01 | 99.4% | 73.2% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.72 | 42.0 | 5.36e-01 | 89.3% | 100.0% |
| 2vjiA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 66.0 | 4.77e-01 | 98.8% | 43.0% |
| 1dbgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 66.0 | 4.66e-01 | 100.0% | 50.5% |
| 3gq8A01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 65.0 | 4.69e-01 | 100.0% | 50.4% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 61.0 | 5.90e-01 | 100.0% | 83.2% |
| 3zscA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 65.0 | 5.13e-01 | 100.0% | 76.0% |
| 3b4nA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 64.0 | 5.73e-01 | 100.0% | 82.7% |
| 1gq8A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 63.0 | 5.06e-01 | 100.0% | 60.4% |
| 8tmsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 63.0 | 5.21e-01 | 99.4% | 75.7% |
| 1bheA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 61.0 | 4.69e-01 | 100.0% | 76.6% |
| 2xt2B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.64 | 52.0 | 4.98e-01 | 100.0% | 74.7% |
| 1ee6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.63 | 58.0 | 5.52e-01 | 98.8% | 88.3% |
| 2f3lA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.62 | 45.0 | 5.02e-01 | 98.2% | 96.2% |
| 3nb2A01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.62 | 50.0 | 5.01e-01 | 98.8% | 83.1% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.59 | 54.0 | 4.51e-01 | 100.0% | 72.1% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.54 | 49.0 | 3.50e-01 | 97.6% | 34.8% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941952 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.89 | 85.0 | 5.52e-01 | 100.0% | 28.7% |
| 1714446 | 207.2.1.66 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › WcaM | 0.86 | 70.0 | 4.90e-01 | 100.0% | 30.2% |
| 4856184 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.86 | 82.0 | 6.16e-01 | 100.0% | 56.5% |
| 3191422 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.86 | 82.0 | 5.11e-01 | 100.0% | 27.0% |
| 3195366 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.85 | 81.0 | 5.99e-01 | 100.0% | 54.6% |
| 3206059 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.85 | 81.0 | 6.00e-01 | 100.0% | 55.1% |
| 3987209 | 207.2.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3,Beta_helix | 0.84 | 81.0 | 5.62e-01 | 100.0% | 44.8% |
| 3287619 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.83 | 76.0 | 5.48e-01 | 100.0% | 37.9% |
| 3814525 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.83 | 80.0 | 5.87e-01 | 100.0% | 46.4% |
| 3346616 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.83 | 80.0 | 5.86e-01 | 100.0% | 47.4% |
| 4855553 | 207.2.1.94 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Pect-lyase_RHGA_epim | 0.83 | 79.0 | 6.12e-01 | 100.0% | 53.9% |
| 3820891 | 207.2.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 | 0.82 | 79.0 | 5.85e-01 | 100.0% | 47.0% |
| 3299980 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.82 | 79.0 | 5.71e-01 | 100.0% | 51.3% |
| 3804144 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.82 | 79.0 | 5.62e-01 | 100.0% | 42.0% |
| 3804805 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.82 | 79.0 | 5.81e-01 | 100.0% | 44.9% |
| 2701717 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.82 | 73.0 | 5.34e-01 | 100.0% | 39.4% |
| 3674708 | 207.2.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 | 0.82 | 79.0 | 5.83e-01 | 100.0% | 47.3% |
| 3354845 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.82 | 79.0 | 5.78e-01 | 100.0% | 48.1% |
| 4446517 | 207.2.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3,Beta_helix | 0.82 | 79.0 | 5.81e-01 | 100.0% | 46.8% |
| 4527582 | 207.2.1.76 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Pect-lyase_RHGA_epim, Beta_helix | 0.82 | 79.0 | 5.81e-01 | 100.0% | 46.8% |
| 4012052 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.82 | 79.0 | 5.99e-01 | 100.0% | 55.1% |
| 3670547 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.82 | 79.0 | 5.91e-01 | 100.0% | 49.6% |
| 3341224 | 207.2.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 | 0.82 | 79.0 | 5.74e-01 | 100.0% | 48.2% |
| 4104747 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.82 | 79.0 | 5.68e-01 | 100.0% | 52.5% |
| 3455716 | 207.2.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 | 0.82 | 79.0 | 5.98e-01 | 100.0% | 52.9% |
| 5082766 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.82 | 78.0 | 6.04e-01 | 100.0% | 57.0% |
| 397790 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.81 | 78.0 | 5.51e-01 | 100.0% | 40.4% |
| 4449643 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.81 | 78.0 | 5.50e-01 | 100.0% | 49.8% |
| 4424225 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.81 | 78.0 | 5.50e-01 | 100.0% | 40.0% |
| 5082245 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.81 | 78.0 | 5.38e-01 | 100.0% | 42.0% |
| 339124 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.81 | 77.0 | 5.53e-01 | 100.0% | 47.5% |
| 4969618 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.81 | 65.0 | 5.86e-01 | 99.4% | 62.7% |
| 3373292 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.81 | 78.0 | 6.06e-01 | 100.0% | 59.7% |
| 2546335 | 207.2.1.32 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › CatAgl_D2 | 0.81 | 78.0 | 5.65e-01 | 100.0% | 43.8% |
| 4539832 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 77.0 | 6.01e-01 | 98.8% | 54.6% |
| 4981294 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 67.0 | 6.64e-01 | 100.0% | 83.4% |
| 3164978 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 74.0 | 5.71e-01 | 100.0% | 49.1% |
| 4961992 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 75.0 | 5.42e-01 | 100.0% | 42.4% |
| 5035023 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.77 | 67.0 | 5.46e-01 | 100.0% | 53.3% |
| 3949141 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.77 | 74.0 | 5.23e-01 | 100.0% | 48.4% |
| 3254891 | 207.6.1.8 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Nucleoporin_FG | 0.75 | 50.0 | 5.51e-01 | 100.0% | 83.0% |
| 3294947 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.75 | 71.0 | 5.17e-01 | 100.0% | 54.7% |
| 4944588 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.72 | 61.0 | 5.94e-01 | 100.0% | 81.6% |
| 1109309 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.69 | 65.0 | 4.60e-01 | 100.0% | 81.2% |
| 5006606 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.69 | 61.0 | 5.51e-01 | 100.0% | 70.9% |
| 3263728 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 64.0 | 5.70e-01 | 100.0% | 72.8% |
| 3277454 | 207.2.1.73 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29740 | 0.69 | 64.0 | 5.84e-01 | 100.0% | 83.2% |
| 3251267 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 64.0 | 4.84e-01 | 100.0% | 46.5% |
| 3586654 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.67 | 62.0 | 4.03e-01 | 100.0% | 29.5% |
| 3429908 | 208.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain | 0.65 | 39.0 | 4.60e-01 | 98.8% | 86.1% |
| 3695217 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.65 | 55.0 | 4.72e-01 | 95.3% | 58.5% |
| 5039321 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.63 | 58.0 | 4.27e-01 | 100.0% | 78.6% |
| 4196233 | 207.8.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N | 0.62 | 57.0 | 4.23e-01 | 100.0% | 47.7% |
| 2410150 | 207.10.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Arctic yeast antifreeze protein › Arctic yeast antifreeze protein › Ice_binding | 0.61 | 49.0 | 4.33e-01 | 100.0% | 58.2% |
| 3797001 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.61 | 54.0 | 3.93e-01 | 100.0% | 34.9% |
| 3253669 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.59 | 53.0 | 4.39e-01 | 98.2% | 55.3% |
D5
medium
residues 428-494
Domain cluster:
rep: OQ921339.1__WIT26430.1__X__00033__D414-474
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zppA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.89 | 82.0 | 4.89e-01 | 100.0% | 24.9% |
| 1pxzA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.87 | 80.0 | 4.94e-01 | 100.0% | 30.1% |
| 7chuA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.84 | 77.0 | 4.73e-01 | 100.0% | 21.1% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.83 | 75.0 | 4.86e-01 | 100.0% | 31.6% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.80 | 71.0 | 5.31e-01 | 100.0% | 41.4% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.76 | 63.0 | 4.81e-01 | 100.0% | 39.2% |
| 2w7zA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.74 | 65.0 | 4.56e-01 | 100.0% | 31.4% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 66.0 | 4.26e-01 | 100.0% | 23.6% |
| 3petA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.72 | 63.0 | 4.43e-01 | 100.0% | 52.8% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.72 | 62.0 | 5.45e-01 | 100.0% | 66.0% |
| 2bm5B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.71 | 61.0 | 4.51e-01 | 100.0% | 36.1% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 61.0 | 3.65e-01 | 100.0% | 13.4% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.65 | 52.0 | 4.38e-01 | 100.0% | 50.8% |
| 4xjvA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 47.0 | 3.40e-01 | 100.0% | 59.7% |
| 7fg9A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 43.0 | 3.36e-01 | 100.0% | 74.1% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969187 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.88 | 81.0 | 5.44e-01 | 100.0% | 35.7% |
| 5034599 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.88 | 81.0 | 4.95e-01 | 100.0% | 19.2% |
| 5078365 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.87 | 81.0 | 5.56e-01 | 100.0% | 34.6% |
| 5034971 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.86 | 79.0 | 5.31e-01 | 100.0% | 31.3% |
| 4981823 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.86 | 80.0 | 4.63e-01 | 100.0% | 13.9% |
| 4982073 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.86 | 78.0 | 4.86e-01 | 100.0% | 21.5% |
| 4980180 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.84 | 76.0 | 4.83e-01 | 100.0% | 23.2% |
| 4944592 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.83 | 76.0 | 4.73e-01 | 100.0% | 22.1% |
| 3256804 | 207.2.1.73 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29740 | 0.79 | 72.0 | 4.57e-01 | 100.0% | 31.0% |
| 3713775 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.79 | 70.0 | 4.34e-01 | 100.0% | 18.7% |
| 3769689 | 207.14.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DUF5585 | 0.77 | 53.0 | 5.16e-01 | 100.0% | 65.3% |
| 158287 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.76 | 64.0 | 4.77e-01 | 100.0% | 37.8% |
| 3391275 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 56.0 | 4.88e-01 | 100.0% | 51.4% |
| 4888693 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.75 | 64.0 | 5.15e-01 | 98.5% | 49.2% |
| 3572525 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.74 | 52.0 | 4.97e-01 | 100.0% | 62.5% |
| 3715374 | 207.14.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DGF-1_beta-sheet | 0.74 | 62.0 | 5.36e-01 | 92.5% | 64.8% |
| 3937756 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.74 | 57.0 | 3.93e-01 | 100.0% | 24.3% |
| 1389151 | 207.2.1.25 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › AIDA | 0.72 | 61.0 | 4.01e-01 | 100.0% | 23.0% |
| 5039608 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.70 | 54.0 | 5.39e-01 | 100.0% | 82.9% |
| 4028784 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.69 | 55.0 | 4.81e-01 | 100.0% | 57.1% |
| 4929387 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.69 | 54.0 | 5.39e-01 | 100.0% | 82.9% |
| 3255496 | 207.1.1.129 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_ComC | 0.69 | 60.0 | 3.82e-01 | 100.0% | 23.1% |
| 5041137 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.68 | 53.0 | 5.29e-01 | 100.0% | 84.3% |
| 4634184 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.67 | 57.0 | 3.81e-01 | 100.0% | 34.9% |
| 3629898 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.67 | 59.0 | 5.76e-01 | 100.0% | 97.3% |
| 3359738 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.67 | 59.0 | 3.66e-01 | 100.0% | 38.7% |
| 4935713 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.65 | 55.0 | 4.65e-01 | 95.5% | 68.7% |
| 3997590 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.64 | 52.0 | 5.39e-01 | 100.0% | 100.0% |
| 3855439 | 207.8.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD | 0.63 | 54.0 | 3.60e-01 | 98.5% | 31.9% |
| 1954234 | 207.2.1.31 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Gp49_Pectate_lyase_like | 0.61 | 48.0 | 4.42e-01 | 92.5% | 79.2% |
| 3803729 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.60 | 39.0 | 3.94e-01 | 100.0% | 67.7% |
| 3870521 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.58 | 41.0 | 3.99e-01 | 74.6% | 100.0% |
D6
medium
residues 495-582
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3htvA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 39.0 | 3.22e-01 | 79.5% | 52.4% |
| 1vecA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 2.82e-01 | 76.1% | 63.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3812717 | 207.1.1.115 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_EndoS | 0.57 | 34.0 | 2.18e-01 | 100.0% | 11.7% |
| 3238147 | 207.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain | 0.56 | 38.0 | 2.99e-01 | 100.0% | 31.0% |
D7
medium
residues 583-730
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.65 | 47.0 | 4.68e-01 | 100.0% | 70.1% |
| 3n6zA01 | 2.160.20.110 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.60 | 55.0 | 4.53e-01 | 100.0% | 68.7% |
| 4i84A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.59 | 54.0 | 4.30e-01 | 100.0% | 51.7% |
| 2qyuA01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.56 | 38.0 | 3.82e-01 | 91.9% | 65.0% |
| 3zscA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.56 | 51.0 | 3.96e-01 | 100.0% | 59.0% |
| 1cqxA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.55 | 33.0 | 3.38e-01 | 83.8% | 60.6% |
| 3ak5D02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.52 | 47.0 | 3.03e-01 | 100.0% | 23.4% |
| 2eixA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.51 | 31.0 | 3.22e-01 | 85.1% | 63.2% |
| 3jx8A00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.51 | 47.0 | 3.91e-01 | 100.0% | 76.9% |
| 1ea0A04 | 2.160.20.60 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Glutamate synthase, alpha subunit, C-terminal domain | 0.50 | 45.0 | 3.69e-01 | 100.0% | 53.9% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963707 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.73 | 38.0 | 4.96e-01 | 100.0% | 91.3% |
| 5020282 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.67 | 36.0 | 4.42e-01 | 88.5% | 81.1% |
| 5040588 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.67 | 37.0 | 3.99e-01 | 89.9% | 62.4% |
| 2516583 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.66 | 35.0 | 4.31e-01 | 91.9% | 82.2% |
| 3571723 | 207.4.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › PMG, Keratin_B2_2 | 0.66 | 48.0 | 4.88e-01 | 100.0% | 76.6% |
| 3708794 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.65 | 49.0 | 4.72e-01 | 100.0% | 68.6% |
| 3281086 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.64 | 47.0 | 4.71e-01 | 100.0% | 75.3% |
| 4928776 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.63 | 53.0 | 4.05e-01 | 100.0% | 40.1% |
| 4940774 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.63 | 37.0 | 4.30e-01 | 91.2% | 81.0% |
| 3778106 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.62 | 55.0 | 4.16e-01 | 96.6% | 40.3% |
| 4969480 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.62 | 51.0 | 4.07e-01 | 100.0% | 45.3% |
| 4028145 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.62 | 44.0 | 4.40e-01 | 100.0% | 70.8% |
| 4029692 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.62 | 57.0 | 4.29e-01 | 100.0% | 52.6% |
| 3987739 | 207.4.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CFSR | 0.61 | 57.0 | 4.81e-01 | 100.0% | 66.3% |
| 4963653 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.61 | 56.0 | 3.92e-01 | 98.6% | 76.2% |
| 4968617 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.61 | 27.0 | 3.26e-01 | 91.2% | 59.0% |
| 5044621 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.61 | 51.0 | 3.88e-01 | 100.0% | 40.0% |
| 4333063 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.61 | 57.0 | 4.33e-01 | 100.0% | 49.5% |
| 1109400 | 207.2.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS | 0.59 | 54.0 | 4.30e-01 | 100.0% | 51.7% |
| 3175357 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.59 | 51.0 | 5.17e-01 | 91.2% | 96.6% |
| 3330344 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.59 | 37.0 | 3.85e-01 | 100.0% | 66.4% |
| 4951076 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.59 | 39.0 | 4.09e-01 | 92.6% | 73.3% |
| 4667612 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.56 | 51.0 | 4.19e-01 | 100.0% | 89.8% |
| 3263728 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.56 | 47.0 | 4.04e-01 | 98.6% | 57.0% |
| 4935713 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.55 | 38.0 | 4.30e-01 | 100.0% | 91.3% |
| 4011657 | 207.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase | 0.55 | 49.0 | 4.21e-01 | 100.0% | 62.2% |
| 5018780 | 207.9.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide_3 | 0.54 | 39.0 | 3.59e-01 | 100.0% | 55.5% |
| 5050988 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.54 | 50.0 | 4.05e-01 | 100.0% | 61.9% |
| 3256108 | 207.2.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP | 0.52 | 47.0 | 3.91e-01 | 100.0% | 77.0% |
| 5057019 | 207.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Alpha subunit of glutamate synthase-C › Alpha subunit of glutamate synthase-C | 0.50 | 44.0 | 3.80e-01 | 95.3% | 63.0% |
D8
medium
residues 731-813
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f3lA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.56 | 50.0 | 4.32e-01 | 100.0% | 85.6% |
| 1ej6A03 | 3.40.50.10760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Reovirus core | 0.54 | 44.0 | 3.21e-01 | 94.0% | 57.4% |
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 41.0 | 3.23e-01 | 90.4% | 70.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3828319 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.64 | 56.0 | 3.54e-01 | 100.0% | 37.4% |
| 4952811 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 55.0 | 3.86e-01 | 100.0% | 61.5% |
| 5039608 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.60 | 42.0 | 4.53e-01 | 95.2% | 87.1% |
| 3964913 | 207.2.1.10 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin | 0.53 | 46.0 | 3.90e-01 | 100.0% | 95.9% |
| 4475590 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.51 | 45.0 | 4.19e-01 | 100.0% | 82.9% |