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MW824416.1__QZI88192.1__SIPHO035v1_p0101__00101
Bact-VirMW824416.1__QZI88192.1__SIPHO035v1_p0101__00101
Identity
- Accession:
- MW824416 ↗
- Kingdom:
- phage
Quality
71.9
mean pLDDT
Taxonomy
TaxID: 2859314
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-39
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nrkA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.78 | 67.0 | 4.35e-01 | 100.0% | 22.4% |
| 4qmaA01 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.74 | 62.0 | 6.12e-01 | 100.0% | 95.0% |
| 4j0eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.71 | 57.0 | 3.56e-01 | 92.1% | 16.8% |
| 7lvzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.70 | 55.0 | 3.47e-01 | 92.1% | 66.5% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.69 | 54.0 | 4.33e-01 | 97.4% | 73.0% |
| 8igrI01 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.67 | 54.0 | 3.59e-01 | 100.0% | 21.6% |
| 2y4tA02 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.66 | 55.0 | 5.07e-01 | 100.0% | 78.8% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.66 | 53.0 | 4.65e-01 | 100.0% | 60.0% |
| 1wpbG01 | 1.10.287.680 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 51.0 | 4.71e-01 | 94.7% | 68.5% |
| 1xdxA01 | 3.30.1140.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 | 0.64 | 52.0 | 4.02e-01 | 100.0% | 97.0% |
| 3k6tB00 | 1.20.5.4010 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 47.0 | 4.56e-01 | 100.0% | 79.6% |
| 3ihmA03 | 6.10.250.650 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 44.0 | 4.21e-01 | 86.8% | 75.5% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3216621 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.82 | 68.0 | 4.86e-01 | 100.0% | 33.3% |
| 4462498 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.80 | 68.0 | 6.50e-01 | 100.0% | 86.7% |
| 4124570 | 1054.1.1.1 ↗ | alpha bundles › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arg_decarbox_C | 0.79 | 66.0 | 6.35e-01 | 100.0% | 93.3% |
| 3276222 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.79 | 66.0 | 4.09e-01 | 100.0% | 18.3% |
| 3489743 | 192.14.1.0 ↗ | alpha bundles › Long alpha-hairpin › Siah interacting protein N terminal domain-like › Siah interacting protein N terminal domain-like | 0.78 | 66.0 | 6.51e-01 | 97.4% | 100.0% |
| 3209183 | 192.31.1.0 ↗ | alpha bundles › Long alpha-hairpin › CP12 › CP12 | 0.78 | 62.0 | 5.97e-01 | 92.1% | 86.7% |
| 5000211 | 2002.1.1.104 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_2_C | 0.75 | 61.0 | 3.56e-01 | 94.7% | 10.5% |
| 3682205 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.74 | 63.0 | 4.29e-01 | 100.0% | 28.3% |
| 3264687 | 6067.1.1.1 ↗ | alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer | 0.72 | 57.0 | 5.00e-01 | 97.4% | 60.0% |
| 3211845 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.71 | 60.0 | 5.95e-01 | 100.0% | 97.5% |
| 3494116 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 57.0 | 3.58e-01 | 100.0% | 67.8% |
| 3202292 | 101.38.1.3 ↗ | alpha arrays › HTH › DNA-binding domain of the replication initiator protein ColE2-Rep › DNA-binding domain of the replication initiator protein ColE2-Rep › DUF6891 | 0.66 | 57.0 | 4.70e-01 | 100.0% | 64.3% |
| 4669981 | 230.3.1.0 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain | 0.66 | 53.0 | 3.61e-01 | 92.1% | 24.1% |
| 3704515 | 2003.1.1.36 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N | 0.65 | 55.0 | 3.50e-01 | 100.0% | 33.0% |