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MW824421.1__QZI92845.1__SIPHO067v1_p0005__00005
Bact-VirMW824421.1__QZI92845.1__SIPHO067v1_p0005__00005
Identity
- Accession:
- MW824421 ↗
- Kingdom:
- phage
Quality
93.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-73
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 56.0 | 5.66e-01 | 81.2% | 73.9% |
| 3askA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 57.0 | 5.99e-01 | 79.7% | 95.2% |
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 53.0 | 4.59e-01 | 79.7% | 50.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 52.0 | 5.12e-01 | 79.7% | 69.9% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 58.0 | 5.96e-01 | 87.0% | 98.5% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 53.0 | 5.47e-01 | 84.1% | 83.3% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 52.0 | 4.54e-01 | 79.7% | 53.0% |
| 4mdwA00 | 2.30.30.1210 | Mainly Beta › Roll › SH3 type barrels. › Domain of unknown function DUF1541 | 0.69 | 61.0 | 4.77e-01 | 98.6% | 93.8% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 54.0 | 5.74e-01 | 89.9% | 100.0% |
| 5z8lA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.65 | 51.0 | 4.25e-01 | 85.5% | 71.4% |
| 2m9uA00 | 2.30.30.850 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 50.0 | 4.65e-01 | 98.6% | 66.3% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.64 | 46.0 | 5.03e-01 | 89.9% | 96.3% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 43.0 | 4.74e-01 | 76.8% | 92.5% |
| 3fmaA00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.61 | 35.0 | 3.38e-01 | 72.5% | 48.1% |
| 4wsfA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 41.0 | 3.53e-01 | 72.5% | 72.1% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.58 | 46.0 | 4.08e-01 | 88.4% | 78.8% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 52.0 | 4.17e-01 | 98.6% | 59.5% |
| 3cpxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.56 | 39.0 | 4.10e-01 | 85.5% | 82.3% |
| 4z88A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 39.0 | 3.97e-01 | 73.9% | 96.9% |
| 1lktA00 | 2.170.14.10 | Mainly Beta › Beta Complex › Tailspike Protein; Chain › Phage P22 tailspike-like, N-terminal domain | 0.56 | 43.0 | 3.78e-01 | 91.3% | 55.8% |
| 2olgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 41.0 | 3.55e-01 | 82.6% | 89.6% |
| 1mkeA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 44.0 | 3.56e-01 | 94.2% | 59.7% |
| 2dn6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.62e-01 | 92.8% | 69.6% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 40.0 | 3.93e-01 | 88.4% | 88.0% |
| 2jz6A01 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.51 | 29.0 | 3.18e-01 | 73.9% | 70.0% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3504417 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 56.0 | 5.07e-01 | 79.7% | 60.0% |
| 3940730 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 57.0 | 5.10e-01 | 81.2% | 63.2% |
| 3938908 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 54.0 | 5.46e-01 | 79.7% | 81.4% |
| 3564972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 54.0 | 5.40e-01 | 79.7% | 80.0% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.71 | 55.0 | 5.18e-01 | 89.9% | 68.2% |
| 2727964 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.70 | 55.0 | 5.82e-01 | 89.9% | 98.3% |
| 1114686 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.70 | 47.0 | 5.10e-01 | 73.9% | 85.7% |
| 3926175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 53.0 | 4.93e-01 | 81.2% | 67.1% |
| 5032461 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 52.0 | 5.33e-01 | 81.2% | 98.5% |
| 4163661 | 4.1.1.446 ↗ | beta barrels › SH3 › SH3 › SH3 › PF30222 | 0.69 | 52.0 | 5.32e-01 | 82.6% | 97.1% |
| 3930643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 52.0 | 5.57e-01 | 81.2% | 95.0% |
| 3507639 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.67 | 51.0 | 5.16e-01 | 82.6% | 88.6% |
| 3500448 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 50.0 | 5.12e-01 | 81.2% | 89.2% |
| 3953498 | 4.1.1.439 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26205 | 0.63 | 52.0 | 5.05e-01 | 88.4% | 93.3% |
| 4881914 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.63 | 45.0 | 3.23e-01 | 75.4% | 39.3% |
| 3279083 | 4.6.1.7 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PF26205 | 0.63 | 51.0 | 4.98e-01 | 88.4% | 93.3% |
| 5042797 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 46.0 | 4.91e-01 | 82.6% | 95.0% |
| 3923675 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.60 | 48.0 | 4.94e-01 | 87.0% | 93.8% |
| 5024264 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.60 | 43.0 | 4.20e-01 | 87.0% | 69.3% |
| 5036802 | 205.1.1.1 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 | 0.58 | 44.0 | 3.49e-01 | 82.6% | 40.0% |
| 3226692 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.57 | 40.0 | 2.92e-01 | 73.9% | 41.0% |
| 3884716 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.55 | 48.0 | 3.91e-01 | 100.0% | 67.4% |
| 4060574 | 1.1.7.70 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_GLAA-B_II | 0.54 | 41.0 | 4.02e-01 | 81.2% | 74.7% |
| 3631824 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 41.0 | 2.60e-01 | 87.0% | 22.0% |
| 3640623 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.53 | 40.0 | 3.52e-01 | 82.6% | 59.0% |
| 4021870 | 220.1.1.215 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_35 | 0.52 | 41.0 | 3.31e-01 | 89.9% | 63.3% |
| 4933171 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.52 | 43.0 | 3.77e-01 | 95.7% | 91.8% |
| 3635320 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.50 | 30.0 | 3.54e-01 | 97.1% | 91.1% |