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MW824421.1__QZI92895.1__SIPHO067v1_p0055__00055
Bact-VirMW824421.1__QZI92895.1__SIPHO067v1_p0055__00055
Identity
- Accession:
- MW824421 ↗
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-113
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wv3A02 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.71 | 62.0 | 6.21e-01 | 100.0% | 92.7% |
| 5e50A01 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.69 | 52.0 | 5.40e-01 | 78.9% | 93.0% |
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 37.0 | 4.36e-01 | 100.0% | 78.7% |
| 7ocxC01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 36.0 | 4.22e-01 | 99.1% | 76.3% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.65 | 40.0 | 4.24e-01 | 98.2% | 69.1% |
| 5bmnA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.64 | 43.0 | 4.84e-01 | 100.0% | 90.4% |
| 2oaiA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.64 | 41.0 | 4.68e-01 | 91.7% | 87.5% |
| 3u2gA01 | 2.60.40.4190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 52.0 | 4.79e-01 | 90.8% | 99.3% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.63 | 36.0 | 3.94e-01 | 98.2% | 68.5% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 41.0 | 4.01e-01 | 100.0% | 62.4% |
| 2pliA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.60 | 40.0 | 4.52e-01 | 91.7% | 88.1% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.60 | 48.0 | 4.46e-01 | 86.2% | 88.7% |
| 2khdA00 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 36.0 | 3.65e-01 | 100.0% | 59.3% |
| 3laeA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.60 | 39.0 | 4.46e-01 | 91.7% | 90.1% |
| 2jsxA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.59 | 37.0 | 4.57e-01 | 100.0% | 98.6% |
| 2f7lA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.59 | 39.0 | 4.35e-01 | 100.0% | 88.2% |
| 2z0fA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.59 | 45.0 | 4.67e-01 | 100.0% | 88.2% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.58 | 39.0 | 4.00e-01 | 98.2% | 70.4% |
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.56 | 27.0 | 3.28e-01 | 88.1% | 71.4% |
| 1f1sA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 45.0 | 3.45e-01 | 90.8% | 95.3% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 44.0 | 4.34e-01 | 100.0% | 83.5% |
| 2nn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 47.0 | 4.10e-01 | 100.0% | 81.9% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.52 | 47.0 | 3.79e-01 | 100.0% | 69.0% |
| 4ifaA01 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.52 | 38.0 | 2.87e-01 | 91.7% | 30.5% |
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.52 | 38.0 | 2.82e-01 | 91.7% | 29.1% |
| 2av5A00 | 3.30.70.3250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit | 0.52 | 40.0 | 4.08e-01 | 100.0% | 83.0% |
| 3cjmA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 42.0 | 3.31e-01 | 93.6% | 89.4% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 45.0 | 4.24e-01 | 100.0% | 81.9% |
| 2le1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 45.0 | 4.08e-01 | 100.0% | 80.8% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 45.0 | 4.20e-01 | 100.0% | 80.7% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5014776 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.85 | 60.0 | 6.96e-01 | 98.2% | 98.8% |
| 5014673 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 58.0 | 6.66e-01 | 96.3% | 100.0% |
| 5015532 | 304.3.1.11 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MNHE | 0.76 | 36.0 | 4.53e-01 | 99.1% | 73.5% |
| 4938162 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 57.0 | 6.25e-01 | 96.3% | 97.8% |
| 3290375 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.73 | 54.0 | 4.82e-01 | 77.1% | 68.0% |
| 3401557 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.73 | 56.0 | 5.60e-01 | 80.7% | 95.5% |
| 3274338 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.73 | 55.0 | 5.42e-01 | 78.9% | 86.1% |
| 3262420 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.71 | 54.0 | 5.25e-01 | 80.7% | 88.3% |
| 3270361 | 73.1.1.9 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA_2 | 0.70 | 54.0 | 5.45e-01 | 81.7% | 88.2% |
| 3210124 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.70 | 54.0 | 4.92e-01 | 82.6% | 89.0% |
| 2722518 | 331.23.1.1 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.68 | 48.0 | 3.87e-01 | 100.0% | 38.9% |
| 3970911 | 304.3.1.11 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MNHE | 0.68 | 35.0 | 3.61e-01 | 100.0% | 51.4% |
| 4002697 | 5090.2.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Immune inhibitor A metallopeptidase C-terminal domain › Immune inhibitor A metallopeptidase C-terminal domain | 0.66 | 56.0 | 4.77e-01 | 89.9% | 73.1% |
| 3409172 | 331.23.1.3 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS11_C | 0.65 | 47.0 | 5.25e-01 | 100.0% | 96.5% |
| 4996248 | 331.19.1.0 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains | 0.64 | 46.0 | 5.02e-01 | 100.0% | 92.2% |
| 3307575 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.63 | 45.0 | 4.76e-01 | 100.0% | 81.0% |
| 3250019 | 1.1.5.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Dicty_CAD | 0.63 | 41.0 | 4.26e-01 | 100.0% | 72.0% |
| 4938623 | 881.1.1.45 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF26686 | 0.63 | 40.0 | 3.51e-01 | 90.8% | 43.7% |
| 3502276 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.62 | 41.0 | 4.57e-01 | 100.0% | 88.2% |
| 5024264 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.60 | 34.0 | 4.01e-01 | 97.2% | 80.0% |
| 3250001 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.60 | 40.0 | 4.34e-01 | 100.0% | 82.0% |
| 5010477 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.59 | 42.0 | 4.43e-01 | 98.2% | 81.0% |
| 4596553 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.59 | 40.0 | 4.65e-01 | 91.7% | 96.2% |
| 1184376 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.59 | 39.0 | 4.11e-01 | 99.1% | 75.3% |
| 2074416 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.58 | 45.0 | 4.58e-01 | 100.0% | 84.9% |
| 5052072 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.58 | 43.0 | 4.45e-01 | 100.0% | 84.0% |
| 5030737 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.58 | 39.0 | 4.22e-01 | 99.1% | 83.3% |
| 4545116 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.58 | 47.0 | 3.60e-01 | 90.8% | 86.5% |
| 5054556 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.57 | 40.0 | 4.27e-01 | 100.0% | 86.7% |
| 5044703 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 39.0 | 3.77e-01 | 91.7% | 63.3% |
| 3387934 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.57 | 40.0 | 4.26e-01 | 100.0% | 84.2% |
| 4479624 | 5090.2.1.1 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Immune inhibitor A metallopeptidase C-terminal domain › Immune inhibitor A metallopeptidase C-terminal domain › InhA-like_VEG | 0.55 | 45.0 | 3.74e-01 | 90.8% | 92.4% |
| 4316228 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.55 | 39.0 | 4.00e-01 | 99.1% | 75.2% |
| 4154363 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.53 | 41.0 | 3.82e-01 | 100.0% | 66.9% |
| 3281547 | 223.1.1.36 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD | 0.53 | 46.0 | 3.98e-01 | 97.2% | 86.3% |
| 3174023 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.53 | 38.0 | 2.95e-01 | 75.2% | 92.2% |
| 3282901 | 223.1.1.35 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 | 0.52 | 39.0 | 2.74e-01 | 92.7% | 24.6% |
| 3280801 | 223.1.1.36 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD | 0.52 | 45.0 | 3.89e-01 | 98.2% | 89.1% |
| 3274134 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.51 | 42.0 | 3.16e-01 | 100.0% | 37.5% |
| 3431804 | 9.13.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Dirigent | 0.51 | 43.0 | 3.77e-01 | 92.7% | 92.7% |
| 3787490 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.51 | 45.0 | 3.50e-01 | 99.1% | 60.4% |
| 4959952 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.51 | 43.0 | 4.03e-01 | 92.7% | 80.7% |
| 5049701 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.50 | 43.0 | 3.50e-01 | 91.7% | 74.0% |
| 5050074 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.50 | 36.0 | 3.40e-01 | 90.8% | 60.7% |
| 3018456 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.50 | 43.0 | 3.78e-01 | 91.7% | 65.6% |
| 4579173 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.50 | 45.0 | 3.64e-01 | 100.0% | 61.2% |