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MW824426.1__QZI89290.1__SIPHO038v1_p0112__00112

Bact-Vir

MW824426.1__QZI89290.1__SIPHO038v1_p0112__00112

Identity

Accession:
MW824426 ↗
Kingdom:
phage

Quality

61.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demerecviridae› Vibrio_phage_70E37.6

TaxID: 2859345

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 255-346
PDB
Domain cluster: rep: OR050627.1__WIC41450.1__MA9V1_186__00186__D132-217
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h1tA01 3.90.1570.30 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › 0.60 34.0 3.02e-01 71.7% 38.0%
4m0hA01 2.60.120.1440 Mainly Beta › Sandwich › Jelly Rolls › 0.57 40.0 3.53e-01 72.8% 75.5%
2c5qA00 3.50.30.40 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Ribonuclease E inhibitor RraA/RraA-like 0.52 38.0 2.85e-01 76.1% 81.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3969910 3772.1.1.1 ↗ beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › FecR 0.57 40.0 3.62e-01 72.8% 63.8%
3389062 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 29.0 2.83e-01 75.0% 45.7%
4934376 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 35.0 3.89e-01 73.9% 90.0%
3694545 2487.1.1.8 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like 0.52 38.0 2.92e-01 77.2% 71.2%
3568983 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 36.0 2.31e-01 73.9% 28.7%
1346264 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 39.0 2.92e-01 85.9% 77.7%
3334007 210.1.3.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_2 0.51 37.0 2.58e-01 78.3% 97.3%
D2 high residues 367-464
PDB
D3 high residues 642-781
PDB
Domain cluster: rep: NC_007149.1__YP_249596.1__VVP4_p28__00028__D493-632
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cidA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 48.0 5.36e-01 81.4% 96.2%
5lz6A00 2.60.120.680 Mainly Beta › Sandwich › Jelly Rolls › GOLD domain 0.60 40.0 4.25e-01 87.9% 76.2%
5xnrA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 39.0 4.13e-01 87.1% 74.8%
1tg7A04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 41.0 3.87e-01 87.9% 59.4%
1od3A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 38.0 3.94e-01 91.4% 71.0%
4lplA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 39.0 3.91e-01 87.1% 71.1%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.94e-01 91.4% 79.2%
3juuA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 3.55e-01 87.9% 75.0%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 42.0 3.95e-01 94.3% 68.4%
4qi3A00 2.60.40.1210 Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain 0.53 46.0 4.04e-01 94.3% 87.0%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 4.02e-01 91.4% 89.6%
4bpzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 3.57e-01 87.1% 75.7%
3zxaC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 3.66e-01 80.0% 81.0%
5zi7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.53 39.0 3.60e-01 88.6% 58.9%
2dd7A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 40.0 3.52e-01 80.7% 74.3%
1st8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 42.0 3.87e-01 87.1% 93.2%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.99e-01 92.1% 89.8%
3ai4A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.52 41.0 3.40e-01 82.9% 79.7%
3uxfA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 4.23e-01 93.6% 81.3%
4awdB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.35e-01 87.9% 74.3%
2wzpP03 2.60.120.880 Mainly Beta › Sandwich › Jelly Rolls › 0.52 41.0 4.28e-01 87.9% 92.1%
3hnmA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 37.0 3.54e-01 87.9% 62.3%
1gbgA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.66e-01 87.9% 78.0%
1mveA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.54e-01 88.6% 73.6%
1qu0C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.87e-01 89.3% 86.3%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 4.04e-01 87.9% 82.9%
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 33.0 3.72e-01 100.0% 92.9%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.52e-01 87.9% 80.6%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4003995 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 45.0 4.41e-01 90.0% 69.3%
5083741 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 41.0 4.49e-01 91.4% 91.8%
3653845 10.32.1.198 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 0.56 44.0 4.15e-01 87.1% 70.0%
3818454 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 46.0 3.92e-01 88.6% 76.4%
3995219 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 3.94e-01 75.0% 77.3%
3707311 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.55 46.0 3.92e-01 91.4% 72.8%
4941997 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.54 46.0 3.94e-01 91.4% 70.7%
3860289 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.54 43.0 4.18e-01 89.3% 76.8%
4956761 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 39.0 3.74e-01 89.3% 65.6%
3927635 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 43.0 3.89e-01 88.6% 85.5%
4058971 10.1.1.5 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin 0.53 45.0 3.96e-01 92.1% 80.0%
3970845 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 45.0 4.16e-01 93.6% 78.9%
1101 10.1.1.18 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sialidase 0.53 44.0 3.99e-01 92.1% 89.8%
4942423 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 3.71e-01 85.0% 82.9%
3929940 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 42.0 3.78e-01 86.4% 80.0%
3207356 10.1.1.22 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 0.52 41.0 3.73e-01 86.4% 88.0%
3813157 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 39.0 3.04e-01 79.3% 68.4%
3483066 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 42.0 3.71e-01 87.1% 83.4%
395586 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.51 42.0 3.67e-01 87.9% 78.0%
3715482 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 42.0 3.63e-01 89.3% 78.3%
3803543 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 41.0 3.25e-01 87.9% 72.8%
3607773 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.51 44.0 3.71e-01 93.6% 73.2%
3817281 10.1.1.58 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neprosin 0.51 41.0 3.52e-01 87.1% 87.0%
5045890 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 42.0 4.16e-01 88.6% 100.0%
3249250 4182.1.1.2 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin 0.50 32.0 3.69e-01 100.0% 93.7%
3814412 10.1.1.58 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neprosin 0.50 40.0 3.52e-01 87.9% 91.5%
3211215 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 41.0 3.53e-01 86.4% 83.3%
D4 high residues 961-1035
PDB
Domain cluster: rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
D5 medium residues 54-103
PDB
Domain cluster: representative
D6 medium residues 179-249
PDB
Domain cluster: representative
D7 medium residues 846-897
PDB