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MW824431.1__QZI93154.1__SIPHO049v1_p0029__00029

Bact-Vir

MW824431.1__QZI93154.1__SIPHO049v1_p0029__00029

Identity

Accession:
MW824431 ↗
Kingdom:
phage

Quality

86.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_PS14A.1

TaxID: 2859353

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-90
PDB
Domain cluster: rep: OR145793.1__WLJ70292.1__BU9_CDS0058__00058__D2-80
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 51.0 5.90e-01 84.1% 89.1%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 53.0 5.85e-01 72.7% 82.2%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.72 46.0 5.01e-01 85.2% 78.1%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 43.0 5.02e-01 86.4% 90.0%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.66 44.0 5.18e-01 88.6% 100.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 44.0 4.97e-01 84.1% 98.5%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 43.0 3.97e-01 75.0% 56.5%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 43.0 4.81e-01 88.6% 98.5%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.39e-01 81.8% 88.2%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.59 44.0 4.32e-01 89.8% 71.4%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.55 41.0 3.84e-01 84.1% 62.8%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 50.0 4.85e-01 100.0% 97.9%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.54 37.0 3.49e-01 71.6% 66.1%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 37.0 3.34e-01 83.0% 51.2%
5ywwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 36.0 2.83e-01 71.6% 85.0%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 37.0 2.38e-01 77.3% 79.0%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954284 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 56.0 6.59e-01 87.5% 98.3%
3222051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 55.0 6.31e-01 85.2% 95.4%
3933788 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 50.0 5.95e-01 88.6% 100.0%
4963446 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 48.0 5.59e-01 93.2% 90.8%
3501560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 52.0 5.16e-01 72.7% 85.6%
3924375 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 56.0 6.12e-01 90.9% 96.0%
4151014 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 46.0 5.51e-01 86.4% 96.7%
3941170 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.71 53.0 5.94e-01 86.4% 97.1%
5036621 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 43.0 5.27e-01 88.6% 98.2%
139950 4.1.1.126 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5608 0.71 43.0 5.22e-01 88.6% 96.4%
4505797 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 47.0 5.37e-01 88.6% 92.3%
4622062 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 4.06e-01 85.2% 46.4%
5006274 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.70 54.0 4.59e-01 81.8% 65.7%
3637664 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.70 49.0 4.43e-01 73.9% 70.8%
4953054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 46.0 4.90e-01 90.9% 78.7%
3520654 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.68 56.0 4.64e-01 87.5% 71.3%
3500448 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 45.0 5.11e-01 85.2% 92.3%
5001903 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 46.0 5.05e-01 90.9% 87.1%
4124780 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 47.0 5.18e-01 86.4% 87.7%
4210485 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.67 44.0 5.04e-01 88.6% 90.8%
4581369 4.1.1.166 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2314 0.67 55.0 5.21e-01 88.6% 98.1%
3519861 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 44.0 5.11e-01 86.4% 98.3%
4974211 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.66 43.0 5.06e-01 87.5% 96.7%
4163851 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 44.0 5.17e-01 83.0% 100.0%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 42.0 4.96e-01 87.5% 96.7%
4476045 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 46.0 5.14e-01 86.4% 92.9%
3523918 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.65 45.0 5.10e-01 88.6% 95.4%
4987744 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.65 51.0 4.37e-01 83.0% 67.4%
4302032 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 45.0 5.13e-01 85.2% 98.5%
4527355 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 46.0 5.14e-01 85.2% 95.7%
3511277 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 5.40e-01 88.6% 100.0%
4660084 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 44.0 4.92e-01 86.4% 92.8%
4429329 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 45.0 5.08e-01 84.1% 100.0%
3714156 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 53.0 5.44e-01 92.0% 94.1%
4299932 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 43.0 4.82e-01 86.4% 95.4%
4359892 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.62 43.0 4.49e-01 89.8% 77.5%
4264671 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 46.0 4.77e-01 85.2% 85.0%
4625654 4.1.1.445 ↗ beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.62 44.0 4.70e-01 88.6% 86.7%
5033892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.83e-01 88.6% 98.5%
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 42.0 4.64e-01 85.2% 94.3%
3339169 4.1.1.415 ↗ beta barrels › SH3 › SH3 › SH3 › PNPOx_N 0.59 44.0 4.50e-01 87.5% 82.4%
3603402 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.58 46.0 4.65e-01 85.2% 92.2%
5041801 4.15.1.0 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.58 46.0 4.68e-01 84.1% 94.1%
3476221 2498.1.1.14 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.58 44.0 2.78e-01 81.8% 32.8%
4650162 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 41.0 4.69e-01 87.5% 100.0%
4956695 4.15.1.0 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.57 46.0 4.82e-01 87.5% 93.8%
3989070 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 43.0 3.31e-01 86.4% 67.4%
1851176 5092.1.1.0 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins 0.54 44.0 3.82e-01 88.6% 75.7%
3966494 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.52 36.0 3.36e-01 71.6% 65.5%
3967527 4216.1.1.1 ↗ a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS 0.52 42.0 3.49e-01 92.0% 61.5%
5046498 219.1.1.51 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.52 44.0 3.67e-01 97.7% 92.7%
3398231 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.50 39.0 3.02e-01 86.4% 84.6%