←Back to structures

MW824431.1__QZI93205.1__SIPHO049v1_p0080__00080

Bact-Vir

MW824431.1__QZI93205.1__SIPHO049v1_p0080__00080

Identity

Accession:
MW824431 ↗
Kingdom:
phage

Quality

54.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_PS14A.1

TaxID: 2859353

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 14-108
PDB
D2 medium residues 109-158
PDB
D3 medium residues 159-209
PDB
D4 medium residues 318-464_605-657
PDB
Domain cluster: rep: MN698245.1__QGZ18159.1__HTVC111P_gp46__00046__D46-220
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10145.15 best PhageMin_Tail 47.0 4.20e-12 53.5% 45.3%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hd6A00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.62 44.0 3.53e-01 73.0% 44.2%
4ezcB00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.56 39.0 3.27e-01 71.0% 45.4%
4jkvB02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.55 39.0 3.31e-01 73.0% 85.7%
4h3tA02 1.10.132.100 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.53 29.0 3.37e-01 95.0% 71.6%
3zevB00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 36.0 3.18e-01 70.5% 92.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4032310 159.1.2.6 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail 0.95 70.0 8.21e-01 87.0% 100.0%
3963765 159.1.2.5 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3 0.63 53.0 5.51e-01 88.5% 100.0%
4050871 5000.4.1.4 ↗ alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain › PF28873 0.60 27.0 2.80e-01 85.0% 44.2%
3450498 5073.1.1.0 ↗ alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M 0.53 40.0 3.24e-01 77.0% 79.0%
D5 medium residues 465-604
PDB
Domain cluster: rep: NC_048166.1__YP_009820345.1__HOV23_gp014__00014__D490-699
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10145.15 best PhageMin_Tail 85.6 6.20e-24 87.1% 49.8%
D6 medium residues 787-846
PDB
D7 medium residues 847-939
PDB
D8 medium residues 1078-1127
PDB