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MW825358.1__QVD49079.1__LUCX_9__00009
Bact-VirMW825358.1__QVD49079.1__LUCX_9__00009
Identity
- Accession:
- MW825358 ↗
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Taxonomy
TaxID: 2829408
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 138-283
Domain cluster:
rep: NC_048792.1__YP_009849274.1__HWC48_gp236__00178__D125-293
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.77 | 34.0 | 4.69e-01 | 100.0% | 80.5% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.73 | 33.0 | 3.31e-01 | 99.3% | 42.3% |
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.68 | 51.0 | 5.28e-01 | 78.8% | 92.1% |
| 1tu9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.65 | 49.0 | 5.15e-01 | 78.8% | 99.2% |
| 1cg5B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 50.0 | 5.08e-01 | 81.5% | 100.0% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.63 | 32.0 | 3.08e-01 | 100.0% | 43.5% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 49.0 | 4.99e-01 | 82.2% | 100.0% |
| 4ocqA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.61 | 45.0 | 3.86e-01 | 76.0% | 86.7% |
| 7smgD00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.61 | 42.0 | 4.30e-01 | 70.5% | 85.2% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 44.0 | 4.51e-01 | 74.7% | 99.3% |
| 1qdbA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.59 | 34.0 | 3.43e-01 | 91.1% | 57.3% |
| 3mesA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.59 | 45.0 | 3.59e-01 | 79.5% | 87.8% |
| 2wg7A00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.58 | 38.0 | 4.20e-01 | 82.2% | 80.2% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.58 | 37.0 | 4.26e-01 | 76.0% | 84.8% |
| 4mhlA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 40.0 | 3.88e-01 | 84.2% | 64.0% |
| 5figA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 37.0 | 4.37e-01 | 76.7% | 97.0% |
| 3lmfA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 39.0 | 4.46e-01 | 79.5% | 97.2% |
| 1zoyA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.54 | 34.0 | 3.76e-01 | 80.8% | 78.6% |
| 4pdyA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.53 | 40.0 | 3.52e-01 | 80.1% | 96.6% |
| 6xpdA01 | 1.20.1510.10 | Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain | 0.53 | 40.0 | 3.61e-01 | 78.1% | 77.7% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.53 | 38.0 | 4.26e-01 | 75.3% | 97.4% |
| 2vzbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 40.0 | 3.83e-01 | 84.9% | 68.9% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.52 | 29.0 | 3.46e-01 | 85.6% | 80.4% |
| 4e3wA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 37.0 | 2.87e-01 | 73.3% | 80.5% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 37.0 | 3.69e-01 | 80.1% | 72.2% |
| 2k36A00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.51 | 39.0 | 3.96e-01 | 91.1% | 81.2% |
| 2j1dG01 | 1.20.58.2220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain | 0.50 | 36.0 | 2.67e-01 | 78.8% | 27.8% |
| 2jx0A00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.50 | 40.0 | 4.25e-01 | 99.3% | 94.7% |
| 1dbhA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.50 | 41.0 | 3.61e-01 | 86.3% | 73.0% |
| 2jswA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.50 | 41.0 | 3.75e-01 | 85.6% | 73.0% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.50 | 39.0 | 4.17e-01 | 95.2% | 95.9% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3710592 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.70 | 40.0 | 4.93e-01 | 84.9% | 86.3% |
| 3531746 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.68 | 33.0 | 3.92e-01 | 100.0% | 66.7% |
| 3175575 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.62 | 46.0 | 3.18e-01 | 82.9% | 22.6% |
| 4011740 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 36.0 | 4.35e-01 | 74.7% | 86.0% |
| 4955536 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.59 | 45.0 | 3.90e-01 | 79.5% | 92.3% |
| 4019714 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.59 | 43.0 | 4.76e-01 | 84.9% | 93.3% |
| 3453205 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.55 | 46.0 | 4.69e-01 | 87.0% | 92.9% |
| 3852486 | 174.1.1.43 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 | 0.55 | 45.0 | 4.50e-01 | 86.3% | 94.0% |
| 4025809 | 604.6.1.22 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › EMC4 | 0.54 | 35.0 | 3.98e-01 | 81.5% | 85.5% |
| 4958201 | 604.39.1.1 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › CbiM | 0.54 | 41.0 | 3.70e-01 | 80.8% | 63.3% |
| 5059607 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 38.0 | 3.85e-01 | 80.1% | 70.0% |
| 3693131 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.53 | 37.0 | 4.13e-01 | 79.5% | 87.5% |
| 3574264 | 109.4.1.213 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FancD2 | 0.53 | 42.0 | 2.65e-01 | 84.2% | 19.7% |
| 3811877 | 3937.1.1.0 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 | 0.52 | 42.0 | 4.09e-01 | 87.0% | 82.4% |
| 3884349 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.52 | 34.0 | 3.66e-01 | 80.1% | 77.6% |
| 3657913 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.51 | 42.0 | 3.91e-01 | 86.3% | 91.7% |
| None | — | 0.51 | 45.0 | 3.39e-01 | 97.3% | 53.4% | |
| 3225375 | 601.1.3.6 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › A middle domain of Talin 1 › Talin_IBS2B | 0.51 | 41.0 | 4.03e-01 | 100.0% | 78.8% |
D2
medium
residues 1-128_447-476
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ccyA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 29.0 | 3.07e-01 | 79.7% | 46.3% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 32.0 | 3.62e-01 | 75.3% | 71.7% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 25.0 | 3.39e-01 | 96.2% | 80.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4029157 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.59 | 26.0 | 2.78e-01 | 74.1% | 45.2% |
| 5064592 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.52 | 36.0 | 3.77e-01 | 72.2% | 84.7% |
| 3683542 | 3755.3.1.285 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › NET2A | 0.51 | 36.0 | 3.09e-01 | 72.2% | 82.0% |
| 4996693 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.51 | 38.0 | 3.41e-01 | 77.8% | 99.5% |
D3
medium
residues 285-425
Domain cluster:
representative