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MW825358.1__QVD49218.1__LUCX_148__00148

Bact-Vir

MW825358.1__QVD49218.1__LUCX_148__00148

Identity

Accession:
MW825358 ↗
Kingdom:
phage

Quality

92.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_vB_XciM_LucasX

TaxID: 2829408

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-91
PDB
Domain cluster: rep: CG10_big_fil_rev_8_21_14_0-10_scaffold_17_prodigal-single.1__X__X__00096__D70-143
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 31.5 1.40e-07 44.4% 69.6%
D2 medium residues 97-138
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tmaJ00 3.30.50.10 Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A 0.74 56.0 5.02e-01 100.0% 59.6%
3v33B00 3.40.50.11980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 44.0 3.01e-01 71.4% 58.7%
5yvxA00 3.30.40.100 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.62 48.0 4.36e-01 88.1% 70.0%
5y20A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.60 46.0 4.39e-01 92.9% 73.1%
3mhsC02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.57 37.0 4.08e-01 92.9% 100.0%
2epcA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.56 36.0 3.83e-01 95.2% 81.8%
1wjpA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.54 34.0 3.72e-01 95.2% 87.1%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.53 38.0 2.84e-01 71.4% 94.8%
2dlqA03 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.50 33.0 3.46e-01 95.2% 96.4%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3260588 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.82 70.0 6.62e-01 95.2% 80.0%
4031664 375.1.1.75 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2197 0.70 59.0 6.00e-01 92.9% 100.0%
3431630 103.5.1.8 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF1677 0.69 59.0 4.91e-01 100.0% 90.7%
3521800 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.68 51.0 5.44e-01 88.1% 100.0%
3451619 102.1.1.117 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF1677 0.68 57.0 4.50e-01 100.0% 64.2%
3438405 386.1.1.310 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF1677 0.68 58.0 4.98e-01 100.0% 82.6%
3609284 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.67 53.0 5.04e-01 97.6% 100.0%
3250876 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.66 53.0 5.07e-01 92.9% 90.0%
3658113 857.1.1.16 ↗ a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › DUF1677 0.66 56.0 4.82e-01 100.0% 87.1%
3324859 376.1.3.6 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-CW 0.66 50.0 4.70e-01 88.1% 78.2%
3704041 375.1.1.77 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 0.65 44.0 4.86e-01 81.0% 100.0%
3701855 375.1.1.77 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 0.65 44.0 4.88e-01 88.1% 100.0%
3658922 148.1.3.176 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF1677 0.65 53.0 4.34e-01 97.6% 72.9%
3698517 375.1.1.77 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 0.64 54.0 5.16e-01 97.6% 96.0%
3604970 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 49.0 4.83e-01 88.1% 100.0%
3596494 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 47.0 4.98e-01 95.2% 100.0%
3611033 3681.1.1.0 ↗ a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit 0.63 50.0 3.80e-01 95.2% 86.1%
3540526 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.63 39.0 4.45e-01 92.9% 90.0%
3509877 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 39.0 4.04e-01 95.2% 72.5%
4404543 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 39.0 3.97e-01 97.6% 72.5%
3363268 386.1.1.143 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Znf_XAF1_N 0.58 38.0 4.21e-01 95.2% 93.3%
3241530 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 38.0 4.08e-01 97.6% 96.7%
3392575 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 37.0 3.93e-01 97.6% 85.7%
3274032 375.1.1.211 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ima1_N 0.55 48.0 4.71e-01 100.0% 97.8%
3198599 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 38.0 3.86e-01 97.6% 72.1%
3913685 386.1.1.25 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-H2C2_5 0.50 33.0 3.42e-01 100.0% 75.0%
D3 medium residues 145-178
PDB
Domain cluster: representative
CATH (83)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.99 91.0 7.62e-01 100.0% 63.0%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.98 89.0 6.96e-01 100.0% 51.5%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.95 84.0 7.30e-01 100.0% 66.7%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 83.0 7.05e-01 100.0% 66.7%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 83.0 6.68e-01 100.0% 57.1%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.93 81.0 6.92e-01 100.0% 61.8%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.92 84.0 7.56e-01 100.0% 75.6%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 80.0 6.39e-01 100.0% 52.2%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 80.0 6.38e-01 100.0% 52.2%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.92 79.0 5.58e-01 100.0% 34.7%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.92 81.0 5.35e-01 100.0% 27.0%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 78.0 6.57e-01 97.1% 60.7%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 79.0 5.95e-01 100.0% 43.8%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 78.0 6.30e-01 100.0% 55.4%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 78.0 6.43e-01 100.0% 59.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 76.0 5.76e-01 100.0% 45.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 72.0 6.09e-01 94.1% 56.9%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 74.0 5.75e-01 100.0% 44.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 75.0 5.91e-01 100.0% 48.6%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 76.0 7.24e-01 100.0% 87.8%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 74.0 6.39e-01 100.0% 60.7%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.87 72.0 5.28e-01 100.0% 35.4%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 72.0 5.65e-01 100.0% 46.7%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 74.0 6.08e-01 100.0% 55.6%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 72.0 6.13e-01 100.0% 60.3%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 71.0 6.17e-01 100.0% 66.7%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.83 72.0 5.05e-01 100.0% 32.1%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.83 68.0 5.03e-01 100.0% 37.2%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.83 69.0 4.60e-01 100.0% 25.4%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 5.61e-01 100.0% 56.2%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.82 68.0 5.53e-01 100.0% 51.5%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.82 67.0 5.87e-01 100.0% 62.5%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 71.0 5.42e-01 100.0% 50.0%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 5.68e-01 100.0% 57.8%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.80 68.0 4.97e-01 100.0% 84.0%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 65.0 6.14e-01 100.0% 79.5%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 66.0 4.64e-01 100.0% 31.0%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.79 65.0 4.27e-01 100.0% 21.9%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.79 67.0 4.56e-01 100.0% 28.2%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 5.59e-01 100.0% 55.6%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 5.61e-01 94.1% 68.0%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 62.0 5.41e-01 100.0% 60.0%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.78 67.0 4.12e-01 97.1% 37.1%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 5.87e-01 100.0% 71.4%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.29e-01 100.0% 53.7%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 4.72e-01 100.0% 37.6%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.70e-01 100.0% 72.0%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 4.23e-01 100.0% 26.1%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 67.0 6.07e-01 100.0% 89.1%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.76 61.0 5.71e-01 100.0% 76.1%
3cjdA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.76 62.0 3.96e-01 100.0% 23.1%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 4.40e-01 100.0% 31.0%
2k9qA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 55.0 5.22e-01 79.4% 72.5%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 4.61e-01 100.0% 38.2%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 58.0 4.31e-01 100.0% 35.6%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 4.42e-01 100.0% 35.4%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 4.33e-01 73.5% 46.6%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 4.85e-01 100.0% 44.9%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.50e-01 100.0% 38.3%
2v9kA01 1.10.10.2050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 62.0 5.56e-01 100.0% 94.0%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 58.0 5.44e-01 100.0% 80.9%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 58.0 5.36e-01 100.0% 77.6%
3vuqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.72 60.0 3.87e-01 100.0% 23.9%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 4.23e-01 100.0% 30.8%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 4.09e-01 100.0% 31.2%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 61.0 5.00e-01 100.0% 55.4%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 57.0 4.72e-01 100.0% 52.9%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 4.55e-01 100.0% 44.4%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 4.68e-01 100.0% 62.7%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.71 52.0 5.14e-01 94.1% 80.5%
4ivnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.63e-01 100.0% 47.4%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.70 60.0 3.74e-01 100.0% 20.5%
2d6yA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.70 54.0 3.52e-01 100.0% 22.6%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 55.0 4.85e-01 100.0% 72.4%
2rasA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 55.0 3.53e-01 100.0% 21.5%
2o7tA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 55.0 3.57e-01 100.0% 26.5%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 3.64e-01 100.0% 25.2%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 57.0 3.69e-01 100.0% 24.3%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 53.0 4.93e-01 100.0% 85.7%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.15e-01 100.0% 58.7%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 55.0 4.53e-01 100.0% 60.9%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 48.0 3.80e-01 100.0% 44.8%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.62 51.0 4.23e-01 100.0% 68.7%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4162857 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 1.00 93.0 7.98e-01 100.0% 68.0%
5018167 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 1.00 93.0 7.06e-01 100.0% 48.6%
3789627 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 1.00 93.0 7.22e-01 100.0% 52.3%
3879118 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.99 92.0 7.62e-01 100.0% 61.8%
4929382 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.99 91.0 7.57e-01 100.0% 61.8%
4946254 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.99 91.0 8.18e-01 100.0% 75.6%
5021231 101.1.1.544 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 0.99 91.0 6.51e-01 100.0% 40.0%
3693390 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.98 90.0 7.27e-01 100.0% 56.7%
4054648 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.98 90.0 7.49e-01 100.0% 61.8%
3977377 101.1.2.836 ↗ alpha arrays › HTH › HTH › winged helix domain › Terminase_5 0.98 87.0 5.91e-01 97.1% 31.4%
5078377 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.97 88.0 7.63e-01 100.0% 68.0%
4927434 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.97 88.0 7.94e-01 100.0% 75.6%
4198219 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.97 88.0 7.95e-01 100.0% 75.6%
5002577 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.97 88.0 5.82e-01 100.0% 29.2%
5071227 2005.1.1.18 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.97 88.0 4.96e-01 100.0% 11.3%
4334657 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.97 88.0 7.92e-01 100.0% 75.6%
5018585 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.97 88.0 7.34e-01 100.0% 61.8%
4979402 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.96 87.0 7.06e-01 100.0% 56.7%
3989075 101.1.3.11 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.96 87.0 8.40e-01 100.0% 89.5%
4952807 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.96 86.0 6.53e-01 100.0% 45.3%
4974140 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.96 87.0 6.04e-01 100.0% 35.0%
4970998 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.96 87.0 6.01e-01 100.0% 34.0%
5060990 2005.1.1.18 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.96 86.0 4.95e-01 100.0% 12.5%
4986796 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.96 86.0 8.62e-01 100.0% 100.0%
5057202 101.1.3.8 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.96 86.0 6.64e-01 100.0% 48.6%
3589359 101.1.1.68 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.95 85.0 8.09e-01 100.0% 85.0%
3945880 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.95 85.0 7.14e-01 100.0% 61.8%
4973199 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.95 84.0 6.91e-01 100.0% 56.7%
3278040 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.95 85.0 6.91e-01 100.0% 56.7%
3589364 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.94 84.0 5.44e-01 100.0% 25.2%
3287536 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.94 84.0 7.64e-01 100.0% 77.8%
4486944 7565.1.1.0 ↗ a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.94 87.0 5.26e-01 100.0% 19.4%
3477795 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.94 80.0 7.34e-01 97.1% 73.3%
3232498 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.94 83.0 6.45e-01 100.0% 48.6%
3589152 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.93 82.0 7.49e-01 100.0% 77.8%
3925603 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.93 82.0 7.22e-01 100.0% 68.0%
4008959 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.93 82.0 6.95e-01 100.0% 61.8%
3979166 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.93 82.0 6.42e-01 100.0% 48.6%
1159643 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.93 81.0 6.34e-01 100.0% 47.9%
3968864 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.93 81.0 6.23e-01 100.0% 46.7%
3942922 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.93 85.0 6.36e-01 100.0% 46.7%
3706139 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 81.0 7.15e-01 100.0% 70.0%
4986612 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.92 77.0 7.01e-01 94.1% 73.3%
3701286 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.92 81.0 7.11e-01 100.0% 70.0%
3947091 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.92 80.0 6.60e-01 100.0% 58.3%
3944309 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 80.0 7.08e-01 100.0% 70.0%
4945039 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.92 80.0 6.59e-01 100.0% 56.7%
3640035 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 79.0 5.88e-01 100.0% 41.2%
3590541 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.91 79.0 4.91e-01 100.0% 19.4%
3942478 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.91 78.0 6.70e-01 100.0% 63.6%
4238039 101.1.1.68 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.91 80.0 6.59e-01 100.0% 58.3%
5050152 101.1.3.35 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Terminase_5 0.91 79.0 6.97e-01 100.0% 70.0%
3404418 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.91 79.0 6.20e-01 100.0% 50.0%
4952035 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 77.0 6.42e-01 100.0% 56.7%
4008147 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 79.0 6.36e-01 100.0% 53.8%
4927516 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.90 77.0 6.41e-01 100.0% 56.7%
4165809 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 78.0 5.77e-01 100.0% 41.2%
4031756 101.1.2.645 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.90 77.0 5.75e-01 100.0% 40.0%
4976345 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.90 77.0 6.40e-01 100.0% 56.7%
5017723 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 77.0 5.97e-01 100.0% 45.3%
4943227 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.89 76.0 7.03e-01 100.0% 75.6%
3283074 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 76.0 5.67e-01 100.0% 41.2%
3976103 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 78.0 6.26e-01 100.0% 53.8%
3597464 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.89 76.0 6.38e-01 100.0% 58.3%
3589192 101.1.1.68 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.89 77.0 5.82e-01 100.0% 43.8%
4031535 101.1.1.275 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.89 77.0 6.38e-01 100.0% 58.3%
4999211 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 75.0 6.96e-01 100.0% 75.6%
3904156 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 74.0 6.90e-01 100.0% 75.6%
5004841 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 76.0 6.16e-01 100.0% 53.8%
5003692 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.88 74.0 6.05e-01 100.0% 52.3%
4965811 101.1.1.559 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.88 75.0 6.30e-01 100.0% 56.7%
4992594 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 75.0 6.90e-01 100.0% 77.8%
3718418 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 75.0 5.63e-01 100.0% 41.2%
3583872 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 75.0 6.47e-01 100.0% 61.8%
5006645 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.88 73.0 6.18e-01 100.0% 56.7%
3565285 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.88 74.0 6.05e-01 100.0% 52.3%
4008322 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 74.0 6.40e-01 100.0% 63.6%
3243649 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 74.0 5.47e-01 100.0% 37.8%
4139052 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.87 73.0 5.73e-01 100.0% 46.7%
4460997 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.87 72.0 6.64e-01 97.1% 75.6%
3376425 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.87 72.0 5.44e-01 100.0% 42.4%
3971636 101.28.1.0 ↗ alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.87 72.0 6.98e-01 100.0% 85.0%
3963874 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 73.0 5.00e-01 100.0% 28.3%
3632861 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 71.0 6.64e-01 100.0% 75.6%
5024511 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 71.0 6.40e-01 100.0% 68.0%
3948900 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 71.0 5.59e-01 100.0% 46.7%
5007028 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 69.0 6.08e-01 100.0% 63.6%
3288492 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.83 68.0 6.41e-01 100.0% 77.8%
3983783 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.83 69.0 5.09e-01 100.0% 36.8%
4262428 2005.1.1.18 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.83 68.0 3.97e-01 100.0% 11.3%
3391053 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 68.0 6.33e-01 100.0% 75.6%
5047812 101.29.1.0 ↗ alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like 0.81 66.0 5.65e-01 100.0% 56.7%
5002651 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 67.0 4.97e-01 100.0% 38.9%
3282047 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.79 68.0 4.91e-01 100.0% 36.0%
5055780 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 62.0 6.01e-01 100.0% 85.0%
5051680 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.76 62.0 4.87e-01 100.0% 48.8%
3973615 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.76 64.0 5.25e-01 100.0% 60.0%