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MW825358.1__QVD49266.1__LUCX_196__00196
Bact-VirMW825358.1__QVD49266.1__LUCX_196__00196
Identity
- Accession:
- MW825358 ↗
- Kingdom:
- phage
Quality
67.4
mean pLDDT
Taxonomy
TaxID: 2829408
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-137
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00670__D5-100
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04386.19 best | SspB | 44.2 | 3.00e-11 | 74.4% | 57.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ou8A00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.89 | 71.0 | 7.67e-01 | 83.2% | 96.2% |
| 2nysA00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.74 | 58.0 | 5.98e-01 | 84.8% | 86.3% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.62 | 34.0 | 4.30e-01 | 70.4% | 97.0% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 33.0 | 4.02e-01 | 78.4% | 92.0% |
| 3e8vA00 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.55 | 32.0 | 3.88e-01 | 80.0% | 89.0% |
| 3qijB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 30.0 | 3.46e-01 | 77.6% | 78.7% |
| 5bncA02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.52 | 35.0 | 3.94e-01 | 96.0% | 93.5% |
| 1burS00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.51 | 39.0 | 3.99e-01 | 82.4% | 82.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 605 | 4.1.2.1 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB | 0.89 | 71.0 | 7.67e-01 | 83.2% | 96.2% |
| 3838754 | 4.1.2.0 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB | 0.75 | 60.0 | 6.39e-01 | 84.8% | 95.4% |
| 4282868 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.75 | 40.0 | 5.26e-01 | 71.2% | 94.3% |
| 165392 | 4.1.2.1 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB | 0.74 | 59.0 | 6.02e-01 | 96.8% | 86.7% |
| 4335951 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 40.0 | 5.06e-01 | 70.4% | 90.4% |
| 3281945 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.71 | 41.0 | 4.76e-01 | 70.4% | 78.9% |
| 5005811 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.67 | 30.0 | 3.72e-01 | 81.6% | 66.3% |
| 4087011 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 41.0 | 4.59e-01 | 71.2% | 80.0% |
| 4973804 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 31.0 | 3.90e-01 | 76.0% | 72.0% |
| 3942912 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.58 | 35.0 | 4.06e-01 | 72.0% | 85.9% |
| 5061515 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 33.0 | 3.63e-01 | 73.6% | 67.6% |
| 3978997 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.56 | 36.0 | 4.07e-01 | 72.8% | 85.3% |
| 3404845 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.51 | 29.0 | 3.20e-01 | 80.0% | 69.5% |