←Back to structures

MW825358.1__QVD49366.1__LUCX_296__00296

Bact-Vir

MW825358.1__QVD49366.1__LUCX_296__00296

Identity

Accession:
MW825358 ↗
Kingdom:
phage

Quality

78.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_vB_XciM_LucasX

TaxID: 2829408

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-90
PDB
D2 medium residues 98-203
PDB
Domain cluster: rep: KJ528544.1__AHZ10892.1__WP2_20__00020__D418-502
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d98A02 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.81 72.0 6.34e-01 96.2% 80.3%
5jxxA01 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.80 72.0 5.79e-01 96.2% 92.7%
2xqhA01 2.150.10.10 Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal 0.77 73.0 6.66e-01 100.0% 98.5%
7d6c401 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.77 60.0 6.25e-01 83.0% 100.0%
1thjA00 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.76 67.0 5.30e-01 96.2% 70.9%
4m9cA02 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.75 65.0 6.37e-01 93.4% 93.9%
3sucA02 2.160.10.20 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Insect antifreeze protein 0.75 67.0 6.16e-01 96.2% 91.8%
3s6lD00 2.150.10.10 Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal 0.74 71.0 6.03e-01 100.0% 75.9%
5l6vE02 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.74 61.0 5.62e-01 86.8% 86.3%
3ultA00 2.150.10.10 Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal 0.72 63.0 6.15e-01 93.4% 100.0%
2yo0A01 2.150.10.10 Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal 0.67 57.0 4.93e-01 95.3% 60.4%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4983613 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.80 66.0 7.02e-01 86.8% 96.8%
5052851 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.77 62.0 6.68e-01 84.0% 98.9%
5068063 208.1.1.1 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep 0.77 64.0 6.25e-01 87.7% 97.4%
4935686 208.1.1.16 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › LbH_EIF2B 0.76 70.0 6.14e-01 100.0% 91.0%
3984087 3512.1.1.0 ↗ beta duplicates or obligate multimers › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain 0.75 71.0 6.11e-01 100.0% 77.4%
2880595 3512.1.1.0 ↗ beta duplicates or obligate multimers › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain 0.74 71.0 4.81e-01 100.0% 36.5%
1834008 3512.1.1.0 ↗ beta duplicates or obligate multimers › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain 0.74 71.0 6.03e-01 100.0% 75.9%
3937628 208.1.1.16 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › LbH_EIF2B 0.73 67.0 6.42e-01 98.1% 93.3%
5077960 208.1.1.17 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › GMPPB_C 0.72 63.0 6.29e-01 95.3% 90.9%
D3 medium residues 243-318
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3516337 604.7.1.0 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.78 70.0 6.08e-01 96.1% 83.6%
4026154 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.75 65.0 4.95e-01 96.1% 48.0%
D4 medium residues 389-427
PDB
Domain cluster: representative