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MW845758.1__QXO09627.1__pEaSNUABM11_00203__00191
Bact-VirMW845758.1__QXO09627.1__pEaSNUABM11_00203__00191
Identity
- Accession:
- MW845758 ↗
- Kingdom:
- phage
Quality
46.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Wellingtonvirus›
Erwinia_phage_pEa_SNUABM_11
TaxID: 2859245
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-97
Domain cluster:
rep: MW980063.1__QXV73882.1__X__00195__D7-100
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 33.0 | 3.65e-01 | 86.5% | 60.8% |
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 37.0 | 4.12e-01 | 82.3% | 71.6% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 36.0 | 4.12e-01 | 83.3% | 73.2% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.63 | 50.0 | 5.26e-01 | 100.0% | 100.0% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.60 | 38.0 | 3.40e-01 | 85.4% | 45.1% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 37.0 | 4.13e-01 | 79.2% | 80.6% |
| 2v57A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 46.0 | 3.81e-01 | 100.0% | 46.2% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 53.0 | 4.65e-01 | 100.0% | 86.3% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.59 | 52.0 | 4.25e-01 | 96.9% | 97.7% |
| 3ehgA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.59 | 41.0 | 3.77e-01 | 71.9% | 100.0% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.59 | 43.0 | 3.45e-01 | 77.1% | 51.5% |
| 2ei0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 38.0 | 3.27e-01 | 97.9% | 40.8% |
| 2jobA00 | 3.30.160.320 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 39.0 | 3.91e-01 | 93.8% | 65.7% |
| 2ltsA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 39.0 | 4.05e-01 | 91.7% | 77.9% |
| 2nq2A00 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.56 | 49.0 | 3.45e-01 | 97.9% | 55.5% |
| 3juiA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 48.0 | 3.87e-01 | 100.0% | 50.6% |
| 4e5xG00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 44.0 | 4.43e-01 | 97.9% | 82.8% |
| 3s5tA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.56 | 42.0 | 3.67e-01 | 81.2% | 64.1% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 36.0 | 4.25e-01 | 72.9% | 100.0% |
| 1vwxH02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.55 | 35.0 | 3.42e-01 | 78.1% | 59.2% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.55 | 32.0 | 2.90e-01 | 83.3% | 43.9% |
| 4mnrA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 46.0 | 3.31e-01 | 95.8% | 74.7% |
| 3rd4B00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 32.0 | 3.46e-01 | 94.8% | 68.3% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 34.0 | 3.20e-01 | 94.8% | 51.3% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.54 | 46.0 | 4.33e-01 | 96.9% | 75.8% |
| 1e50B00 | 2.40.250.10 | Mainly Beta › Beta Barrel › Polyomavirus Enhancer Binding Protein 2; Chain: A; › Core binding factor, beta subunit | 0.54 | 46.0 | 4.27e-01 | 97.9% | 79.2% |
| 2l6xA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 40.0 | 3.15e-01 | 83.3% | 84.7% |
| 1whnA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 41.0 | 4.06e-01 | 96.9% | 78.2% |
| 6krwA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 41.0 | 2.94e-01 | 90.6% | 27.3% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 42.0 | 3.07e-01 | 88.5% | 60.1% |
| 1tuhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.54e-01 | 89.6% | 58.8% |
| 3dxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.60e-01 | 81.2% | 64.1% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 35.0 | 2.30e-01 | 70.8% | 20.0% |
| 3dlaB01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.51 | 44.0 | 3.17e-01 | 100.0% | 71.7% |
| 1ig8A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 43.0 | 3.89e-01 | 93.8% | 100.0% |
| 1a31A03 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.51 | 38.0 | 3.33e-01 | 80.2% | 62.7% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 39.0 | 2.91e-01 | 94.8% | 29.0% |
| 1bdgA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 42.0 | 3.61e-01 | 93.8% | 80.5% |
| 2jjdF02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 38.0 | 2.86e-01 | 93.8% | 29.4% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3692760 | 864.1.1.9 ↗ | a+b two layers › DLC › DLC › DLC › DUF7888 | 0.82 | 65.0 | 5.73e-01 | 83.3% | 73.9% |
| 3941521 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.67 | 55.0 | 5.27e-01 | 90.6% | 89.4% |
| 3258217 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.65 | 43.0 | 4.83e-01 | 87.5% | 91.4% |
| 4330018 | 330.1.1.6 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C | 0.65 | 38.0 | 4.21e-01 | 82.3% | 73.3% |
| 5002676 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.65 | 52.0 | 4.90e-01 | 87.5% | 73.9% |
| 3179206 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 35.0 | 3.80e-01 | 79.2% | 62.0% |
| 355233 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.64 | 49.0 | 5.20e-01 | 95.8% | 97.5% |
| 4537756 | 330.1.1.25 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26980 | 0.64 | 36.0 | 3.86e-01 | 80.2% | 62.4% |
| 3619264 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.64 | 38.0 | 3.99e-01 | 79.2% | 64.4% |
| 3653274 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.63 | 37.0 | 3.98e-01 | 79.2% | 65.9% |
| 4026007 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 40.0 | 4.33e-01 | 84.4% | 76.2% |
| 3980078 | 274.1.1.24 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSppdC | 0.63 | 43.0 | 4.88e-01 | 99.0% | 98.6% |
| 4796692 | 222.1.1.26 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_transf_1 | 0.62 | 32.0 | 3.53e-01 | 93.8% | 61.3% |
| 3252638 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 36.0 | 3.89e-01 | 78.1% | 68.8% |
| 3593376 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 39.0 | 3.94e-01 | 82.3% | 64.2% |
| 3819309 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.61 | 42.0 | 4.40e-01 | 77.1% | 78.8% |
| 3727458 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 36.0 | 3.83e-01 | 79.2% | 65.9% |
| 4266613 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 37.0 | 3.89e-01 | 85.4% | 67.1% |
| 5021439 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 36.0 | 3.99e-01 | 85.4% | 74.7% |
| 3695678 | 3924.1.1.0 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 | 0.60 | 43.0 | 2.81e-01 | 75.0% | 19.1% |
| 3166240 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 28.0 | 3.38e-01 | 87.5% | 66.7% |
| 3711062 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 38.0 | 3.77e-01 | 83.3% | 62.0% |
| 3245175 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 36.0 | 3.68e-01 | 84.4% | 62.1% |
| 5071078 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.58 | 40.0 | 3.63e-01 | 70.8% | 85.0% |
| 3983708 | 219.1.1.109 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Toxin_15 | 0.58 | 42.0 | 3.38e-01 | 84.4% | 37.4% |
| 3585171 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.58 | 35.0 | 3.73e-01 | 87.5% | 68.2% |
| 4363296 | 330.11.1.1 ↗ | a+b two layers › dsRBD-like › Anti-lipopolysaccharide factor (ALF) › Anti-lipopolysaccharide factor (ALF) › Anti-LPS-SCYG | 0.58 | 40.0 | 4.00e-01 | 93.8% | 69.0% |
| 4938125 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.58 | 39.0 | 4.12e-01 | 80.2% | 78.8% |
| 4027128 | 896.1.1.2 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 | 0.58 | 39.0 | 4.26e-01 | 93.8% | 85.9% |
| 3717739 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 37.0 | 3.83e-01 | 76.0% | 68.9% |
| 4965185 | 7099.1.1.1 ↗ | a+b complex topology › VP5 N-terminal domain › VP5 N-terminal domain › VP5 N-terminal domain › Viral_env_HRPV | 0.56 | 50.0 | 3.48e-01 | 100.0% | 86.2% |
| 3723013 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 43.0 | 3.31e-01 | 82.3% | 87.1% |
| 3504767 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.56 | 35.0 | 3.99e-01 | 94.8% | 87.1% |
| 3908854 | 2484.1.1.215 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 | 0.55 | 38.0 | 2.47e-01 | 70.8% | 53.1% |
| 5038183 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.55 | 47.0 | 4.11e-01 | 97.9% | 62.0% |
| 3619246 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 42.0 | 4.13e-01 | 83.3% | 76.2% |
| 4958666 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.54 | 41.0 | 3.98e-01 | 95.8% | 72.4% |
| 1141950 | 3449.1.1.1 ↗ | a+b two layers › Cpn0803 › Cpn0803 › Cpn0803 › CT_584-like | 0.53 | 41.0 | 3.39e-01 | 92.7% | 45.1% |
| 3280734 | 7579.1.1.32 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › FrsA-like | 0.53 | 42.0 | 2.74e-01 | 85.4% | 26.2% |
| 3288073 | 7579.1.1.137 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › FrsA-like, Abhydrolase_6 | 0.53 | 41.0 | 2.75e-01 | 84.4% | 69.6% |
| 4767909 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.52 | 41.0 | 2.99e-01 | 86.5% | 93.6% |
| 5064859 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.52 | 43.0 | 3.23e-01 | 90.6% | 96.2% |
| 4540372 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.52 | 36.0 | 3.16e-01 | 100.0% | 45.0% |
| 3473351 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.51 | 44.0 | 3.03e-01 | 100.0% | 65.8% |
| 3928618 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 37.0 | 3.68e-01 | 95.8% | 72.4% |
| 5051023 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.50 | 35.0 | 3.34e-01 | 80.2% | 58.8% |
| 3741704 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.50 | 41.0 | 3.72e-01 | 88.5% | 80.0% |
D2
high
residues 376-510
D3
medium
residues 141-193