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MW862981.1__QWY81856.1__SEA_HONK_33__00033
Bact-VirMW862981.1__QWY81856.1__SEA_HONK_33__00033
Identity
- Accession:
- MW862981 ↗
- Kingdom:
- phage
Quality
83.3
mean pLDDT
Taxonomy
TaxID: 2836095
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-89
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.72 | 56.0 | 4.42e-01 | 88.4% | 62.1% |
| 2rqxA00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 48.0 | 3.96e-01 | 74.4% | 81.5% |
| 2gsbA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.68 | 53.0 | 4.27e-01 | 86.0% | 47.6% |
| 4hn7A00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 48.0 | 3.89e-01 | 74.4% | 78.8% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 52.0 | 4.04e-01 | 93.0% | 60.6% |
| 4iqzB01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.65 | 46.0 | 3.95e-01 | 76.7% | 77.8% |
| 3vb0A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.64 | 44.0 | 3.14e-01 | 72.1% | 30.2% |
| 1wxcB01 | 3.30.1880.10 | Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like | 0.62 | 47.0 | 4.33e-01 | 88.4% | 66.1% |
| 2eiyB02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.62 | 48.0 | 3.34e-01 | 90.7% | 78.0% |
| 5g4iB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 43.0 | 2.97e-01 | 76.7% | 67.5% |
| 1mzgB00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.61 | 45.0 | 3.27e-01 | 86.0% | 62.9% |
| 3djlA03 | 2.40.110.20 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › | 0.60 | 48.0 | 3.22e-01 | 88.4% | 65.4% |
| 6njeA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.60 | 46.0 | 2.84e-01 | 90.7% | 30.6% |
| 2vseA04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.59 | 45.0 | 3.23e-01 | 86.0% | 49.0% |
| 4hb9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 47.0 | 2.79e-01 | 93.0% | 40.8% |
| 5x6vG00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 41.0 | 2.97e-01 | 72.1% | 27.3% |
| 3rlfF02 | 3.10.650.10 | Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like | 0.58 | 45.0 | 3.80e-01 | 90.7% | 64.6% |
| 3mcbB00 | 2.20.70.30 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain | 0.58 | 43.0 | 4.06e-01 | 86.0% | 87.9% |
| 2vseA03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 46.0 | 3.39e-01 | 100.0% | 92.9% |
| 1aogA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 47.0 | 3.47e-01 | 93.0% | 95.0% |
| 4cswA02 | 3.40.366.30 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 | 0.57 | 42.0 | 2.91e-01 | 86.0% | 25.0% |
| 1fc4A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 42.0 | 2.99e-01 | 83.7% | 66.9% |
| 3tswB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.55 | 42.0 | 3.41e-01 | 88.4% | 64.9% |
| 2m9uA00 | 2.30.30.850 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 42.0 | 3.58e-01 | 100.0% | 84.3% |
| 3n89A01 | 3.30.310.270 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.54 | 38.0 | 2.58e-01 | 79.1% | 79.9% |
| 2kv8A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.53 | 36.0 | 3.16e-01 | 79.1% | 66.3% |
| 3bfmA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 40.0 | 2.88e-01 | 100.0% | 63.1% |
| 2krsA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 40.0 | 3.76e-01 | 97.7% | 100.0% |
| 7zoiA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 41.0 | 3.17e-01 | 100.0% | 98.4% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.52 | 39.0 | 3.64e-01 | 97.7% | 83.3% |
| 2ja9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 3.29e-01 | 90.7% | 98.8% |
| 3e8tA00 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.52 | 40.0 | 2.74e-01 | 100.0% | 97.2% |
| 4z88A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 38.0 | 3.53e-01 | 93.0% | 100.0% |
| 1ffvB03 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.51 | 37.0 | 2.74e-01 | 93.0% | 31.3% |
| 4ye4H01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.07e-01 | 100.0% | 62.7% |
| 4bbyA02 | 3.30.160.650 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 38.0 | 3.78e-01 | 83.7% | 97.7% |
| 4bpnW02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.50 | 35.0 | 3.47e-01 | 81.4% | 100.0% |
| 3eweA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 39.0 | 2.58e-01 | 100.0% | 83.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3282690 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.72 | 58.0 | 4.28e-01 | 100.0% | 33.3% |
| 4472417 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.72 | 54.0 | 3.57e-01 | 86.0% | 20.0% |
| 3957884 | 4294.1.1.5 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › DUF3179 | 0.67 | 54.0 | 4.08e-01 | 93.0% | 60.9% |
| 4958436 | 2008.1.1.217 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UvrD-helicase | 0.67 | 46.0 | 2.49e-01 | 74.4% | 3.6% |
| 4229239 | 2484.1.1.85 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC_III | 0.66 | 51.0 | 3.27e-01 | 90.7% | 53.6% |
| 4962900 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.66 | 50.0 | 3.96e-01 | 83.7% | 48.3% |
| 3285588 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 51.0 | 4.11e-01 | 93.0% | 46.3% |
| 3473267 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.64 | 46.0 | 4.33e-01 | 83.7% | 62.3% |
| 3492201 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.63 | 47.0 | 4.03e-01 | 83.7% | 61.3% |
| 2429397 | 214.1.1.4 ↗ | a+b two layers › SH2 › SH2 › SH2 › MelC1 | 0.62 | 47.0 | 4.01e-01 | 88.4% | 51.2% |
| 3912504 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.62 | 45.0 | 3.35e-01 | 86.0% | 36.3% |
| 3279033 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 45.0 | 3.87e-01 | 83.7% | 49.3% |
| 4029219 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 47.0 | 3.04e-01 | 88.4% | 34.5% |
| 4958343 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.59 | 44.0 | 3.63e-01 | 86.0% | 45.6% |
| 3414688 | 109.4.1.170 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N | 0.59 | 43.0 | 2.30e-01 | 79.1% | 9.4% |
| 3486720 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.58 | 44.0 | 2.64e-01 | 88.4% | 29.6% |
| 3291448 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 41.0 | 3.38e-01 | 81.4% | 90.0% |
| 3598097 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 43.0 | 2.69e-01 | 90.7% | 34.2% |
| 4249162 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.56 | 43.0 | 2.95e-01 | 86.0% | 46.3% |
| 3472654 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 40.0 | 2.26e-01 | 86.0% | 10.0% |
| 3924553 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.56 | 40.0 | 3.31e-01 | 86.0% | 73.7% |
| 3391006 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 43.0 | 2.66e-01 | 100.0% | 86.2% |
| 4029412 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.54 | 44.0 | 3.35e-01 | 100.0% | 100.0% |
| 3956995 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 40.0 | 3.30e-01 | 88.4% | 53.3% |
| 3314132 | 376.1.6.10 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR, PF26200 | 0.52 | 41.0 | 2.98e-01 | 97.7% | 62.0% |
| 3840076 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.52 | 39.0 | 3.69e-01 | 95.3% | 100.0% |