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MW862981.1__QWY81864.1__SEA_HONK_41__00041
Bact-VirMW862981.1__QWY81864.1__SEA_HONK_41__00041
Identity
- Accession:
- MW862981 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Taxonomy
TaxID: 2836095
Cluster
View cluster (65 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 42-113
Domain cluster:
rep: IMGVR_UViG_3300006225_000064-3300006225-Ga0082206_10205316__D12-71_73-88
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hn3A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.71 | 58.0 | 3.72e-01 | 88.9% | 32.2% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.68 | 53.0 | 3.83e-01 | 86.1% | 29.6% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.67 | 52.0 | 3.76e-01 | 86.1% | 33.8% |
| 3m7vA02 | 3.30.70.1250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phosphopentomutase | 0.67 | 50.0 | 4.28e-01 | 93.1% | 48.8% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 50.0 | 4.64e-01 | 86.1% | 72.6% |
| 5ha4A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.64 | 53.0 | 4.33e-01 | 91.7% | 51.5% |
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.62 | 52.0 | 4.55e-01 | 98.6% | 87.4% |
| 6xzqA01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.61 | 43.0 | 3.36e-01 | 91.7% | 33.3% |
| 6ll8A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.60 | 51.0 | 4.43e-01 | 100.0% | 87.5% |
| 3kxwA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 46.0 | 3.98e-01 | 88.9% | 89.5% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.59 | 48.0 | 3.99e-01 | 93.1% | 52.2% |
| 5anpA00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.59 | 49.0 | 4.07e-01 | 100.0% | 89.7% |
| 4kreA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 47.0 | 3.32e-01 | 91.7% | 70.0% |
| 7r7eA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.58 | 42.0 | 3.72e-01 | 80.6% | 89.9% |
| 4wd3A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 35.0 | 3.54e-01 | 75.0% | 57.3% |
| 4s39A02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.58 | 40.0 | 3.46e-01 | 73.6% | 56.9% |
| 3e5nA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 40.0 | 3.45e-01 | 79.2% | 42.4% |
| 2j6vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.56 | 48.0 | 3.32e-01 | 100.0% | 72.5% |
| 3thaB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 44.0 | 3.08e-01 | 87.5% | 32.1% |
| 1a49A01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.56 | 43.0 | 3.37e-01 | 87.5% | 65.3% |
| 7xjrA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 46.0 | 3.16e-01 | 97.2% | 58.7% |
| 2e11A00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.54 | 45.0 | 3.13e-01 | 95.8% | 49.4% |
| 3hcwA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 39.0 | 3.23e-01 | 77.8% | 42.9% |
| 4s1hA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 46.0 | 3.08e-01 | 97.2% | 53.7% |
| 2heuB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 36.0 | 2.86e-01 | 72.2% | 32.0% |
| 3i3fB00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.52 | 43.0 | 3.64e-01 | 93.1% | 66.4% |
| 4oc8A01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.52 | 44.0 | 3.28e-01 | 100.0% | 69.3% |
| 3nl6C02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 43.0 | 2.87e-01 | 91.7% | 93.2% |
| 2zqeA00 | 3.30.1370.110 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 43.0 | 4.19e-01 | 95.8% | 96.2% |
| 4x7rA03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 36.0 | 2.80e-01 | 73.6% | 57.4% |
| 2cjwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.37e-01 | 98.6% | 90.4% |
| 3gy9A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 42.0 | 3.42e-01 | 98.6% | 45.3% |
| 6yhhA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.52 | 37.0 | 3.03e-01 | 75.0% | 59.9% |
| 2m71A00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.51 | 41.0 | 3.83e-01 | 94.4% | 91.8% |
| 2yzkA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 40.0 | 3.06e-01 | 87.5% | 56.8% |
| 3qtgA03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.51 | 40.0 | 3.48e-01 | 86.1% | 79.1% |
| 3ungC03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 41.0 | 3.47e-01 | 94.4% | 78.2% |
| 1p9oA00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.51 | 43.0 | 3.02e-01 | 100.0% | 94.8% |
| 3odhA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.50 | 40.0 | 3.05e-01 | 90.3% | 75.8% |
| 2kvvA00 | 1.10.1660.60 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 | 0.50 | 30.0 | 2.96e-01 | 98.6% | 52.6% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955488 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 59.0 | 5.06e-01 | 87.5% | 55.5% |
| 5043227 | 2008.1.1.159 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 | 0.70 | 56.0 | 3.69e-01 | 87.5% | 22.2% |
| 5080739 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 54.0 | 3.78e-01 | 84.7% | 30.6% |
| 4967158 | 327.7.1.19 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › Cas_Cas4 | 0.69 | 52.0 | 4.50e-01 | 84.7% | 51.3% |
| 5005960 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.69 | 53.0 | 3.97e-01 | 84.7% | 34.2% |
| 5075190 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.68 | 51.0 | 3.95e-01 | 84.7% | 36.3% |
| 3839415 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.68 | 53.0 | 4.70e-01 | 97.2% | 57.3% |
| 5057784 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 50.0 | 4.54e-01 | 81.9% | 68.4% |
| 5066595 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.64 | 50.0 | 3.73e-01 | 86.1% | 33.5% |
| 3414564 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.64 | 49.0 | 3.34e-01 | 84.7% | 23.2% |
| 3253903 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.64 | 49.0 | 3.57e-01 | 84.7% | 39.5% |
| 4942159 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 49.0 | 3.92e-01 | 84.7% | 80.7% |
| 3728722 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 51.0 | 3.52e-01 | 87.5% | 37.1% |
| 3696130 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.62 | 51.0 | 3.51e-01 | 90.3% | 72.5% |
| 4011075 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.61 | 47.0 | 2.82e-01 | 86.1% | 13.8% |
| 3274159 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 51.0 | 4.44e-01 | 94.4% | 60.0% |
| 4934557 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.60 | 42.0 | 3.59e-01 | 75.0% | 46.1% |
| 4211146 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.60 | 46.0 | 2.96e-01 | 86.1% | 19.5% |
| 4014350 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 46.0 | 3.02e-01 | 86.1% | 22.3% |
| 3875392 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.60 | 48.0 | 4.07e-01 | 90.3% | 66.1% |
| 3238522 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.60 | 46.0 | 3.07e-01 | 86.1% | 20.3% |
| 4590621 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.59 | 45.0 | 2.95e-01 | 86.1% | 21.1% |
| 3691245 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.59 | 45.0 | 3.20e-01 | 86.1% | 29.8% |
| 4971996 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.59 | 50.0 | 3.64e-01 | 95.8% | 95.7% |
| 3511352 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.59 | 39.0 | 3.50e-01 | 73.6% | 46.7% |
| 3284958 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.59 | 41.0 | 3.73e-01 | 75.0% | 89.5% |
| 3821558 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.59 | 45.0 | 2.97e-01 | 86.1% | 20.9% |
| 3723708 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 52.0 | 3.81e-01 | 100.0% | 44.3% |
| 4351693 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.59 | 48.0 | 4.26e-01 | 97.2% | 86.1% |
| 4983536 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.57 | 46.0 | 3.23e-01 | 88.9% | 84.2% |
| 3999455 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.57 | 43.0 | 3.63e-01 | 83.3% | 50.8% |
| 3822590 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.57 | 44.0 | 3.87e-01 | 86.1% | 56.5% |
| 4029882 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 43.0 | 2.96e-01 | 86.1% | 39.3% |
| 3961866 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.56 | 47.0 | 3.97e-01 | 97.2% | 71.5% |
| 4141558 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.56 | 47.0 | 3.49e-01 | 94.4% | 98.4% |
| 3190545 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 44.0 | 3.40e-01 | 95.8% | 95.4% |
| 4162027 | 327.10.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA | 0.55 | 40.0 | 3.71e-01 | 79.2% | 62.1% |
| 3935298 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 47.0 | 2.66e-01 | 100.0% | 14.4% |
| 3488216 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.54 | 36.0 | 2.78e-01 | 70.8% | 42.2% |
| 3427017 | 2485.1.1.45 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_8 | 0.54 | 40.0 | 3.81e-01 | 83.3% | 78.7% |
| 2320713 | 3148.1.1.2 ↗ | a+b two layers › putative secreted protein PA3611 › putative secreted protein PA3611 › putative secreted protein PA3611 › T2SSS_2 | 0.54 | 38.0 | 3.72e-01 | 86.1% | 66.7% |
| 3713445 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.53 | 42.0 | 3.52e-01 | 90.3% | 58.5% |
| 3653823 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.53 | 44.0 | 3.53e-01 | 98.6% | 83.6% |
| 4956039 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.53 | 44.0 | 3.68e-01 | 100.0% | 95.7% |
| 4959354 | 2006.1.6.24 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201 | 0.52 | 39.0 | 3.10e-01 | 84.7% | 37.1% |
| 3478244 | 7512.1.1.66 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Exostosin_GT47 | 0.50 | 38.0 | 2.95e-01 | 87.5% | 35.4% |
| 3387411 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.50 | 35.0 | 3.62e-01 | 80.6% | 78.6% |