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MW862981.1__QWY81877.1__SEA_HONK_54__00054

Bact-Vir

MW862981.1__QWY81877.1__SEA_HONK_54__00054

Identity

Accession:
MW862981 ↗
Kingdom:
phage

Quality

71.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-115
PDB
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2djhA00 3.30.2310.30 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › Colicin E5 C-terminal ribonuclease domain (CRD) 0.82 67.0 6.42e-01 86.0% 93.8%
3g5oC00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.73 62.0 6.25e-01 90.7% 100.0%
1fwxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 53.0 3.34e-01 95.3% 36.8%
5d3xB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 53.0 4.46e-01 95.3% 73.0%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.59 35.0 3.82e-01 88.4% 69.4%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 42.0 3.96e-01 74.4% 89.5%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 45.0 3.87e-01 100.0% 51.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 32.0 3.54e-01 77.9% 67.7%
5c3vA01 3.30.800.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta 0.58 45.0 3.77e-01 88.4% 99.4%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.57 46.0 3.54e-01 91.9% 39.0%
1lf6A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 42.0 2.94e-01 77.9% 60.1%
2w18A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 50.0 3.39e-01 98.8% 35.9%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 49.0 3.31e-01 98.8% 34.1%
4fh3A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 41.0 3.62e-01 80.2% 76.8%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.54 45.0 3.46e-01 93.0% 40.0%
4ccvA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.95e-01 88.4% 82.6%
3vgzC00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 49.0 3.26e-01 100.0% 37.5%
3mwxA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 46.0 3.19e-01 100.0% 96.9%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 3.09e-01 95.3% 34.0%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.52 44.0 3.68e-01 97.7% 63.0%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 38.0 3.56e-01 81.4% 83.6%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 46.0 3.32e-01 100.0% 88.4%
3a7sA00 3.40.532.10 Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase 0.51 39.0 3.02e-01 83.7% 63.7%
6fcvB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 45.0 3.00e-01 100.0% 34.0%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.51 39.0 3.25e-01 84.9% 67.5%
3jbtA06 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 46.0 3.12e-01 100.0% 34.0%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 37.0 3.70e-01 84.9% 74.4%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.51 41.0 3.60e-01 90.7% 65.2%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 45.0 3.07e-01 100.0% 28.3%
3e9mB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 41.0 3.17e-01 90.7% 73.2%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4966645 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.89 69.0 7.72e-01 80.2% 100.0%
4942674 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.87 63.0 7.13e-01 75.6% 100.0%
4968449 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.86 63.0 7.18e-01 75.6% 100.0%
4968653 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.84 75.0 7.20e-01 93.0% 94.7%
4968686 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.83 72.0 6.85e-01 93.0% 92.0%
5062732 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.81 66.0 6.67e-01 84.9% 90.6%
3988707 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.77 48.0 5.82e-01 86.0% 98.2%
2089781 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.76 58.0 5.78e-01 81.4% 83.0%
3457581 5.1.3.68 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.71 51.0 3.32e-01 90.7% 17.8%
3460207 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.67 44.0 3.04e-01 89.5% 21.9%
3213275 5.1.4.158 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 0.66 60.0 3.87e-01 100.0% 34.9%
3582293 5.1.4.158 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 0.66 60.0 3.77e-01 100.0% 30.6%
3705469 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 53.0 4.34e-01 100.0% 71.2%
3594774 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 53.0 4.36e-01 98.8% 70.7%
3611112 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 52.0 4.26e-01 98.8% 68.8%
3279135 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 50.0 3.42e-01 95.3% 36.3%
5000262 5.1.11.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_CGLA 0.57 51.0 3.33e-01 100.0% 28.6%
4946341 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.57 43.0 3.12e-01 89.5% 28.2%
3259865 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 50.0 3.34e-01 95.3% 31.6%
3488069 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 52.0 3.33e-01 100.0% 32.2%
5001484 5.1.4.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.57 50.0 3.35e-01 97.7% 39.7%
3269121 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.56 48.0 4.46e-01 93.0% 75.5%
5077760 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 51.0 3.19e-01 100.0% 27.3%
3178539 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.56 49.0 3.23e-01 100.0% 31.2%
3937517 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 46.0 2.66e-01 93.0% 15.7%
3782385 5.1.4.78 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.55 49.0 3.11e-01 98.8% 30.2%
5044414 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.55 47.0 3.44e-01 100.0% 82.6%
3876697 5.1.5.110 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_FAM234A_B 0.55 48.0 3.01e-01 97.7% 39.8%
None 0.55 49.0 3.29e-01 100.0% 37.1%
5077103 5.1.11.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › PQQ_2 0.55 49.0 3.08e-01 100.0% 23.0%
4989818 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 45.0 3.39e-01 91.9% 79.5%
3765767 5.1.5.110 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_FAM234A_B 0.54 49.0 3.01e-01 98.8% 28.7%
3400083 5.1.5.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N 0.54 46.0 3.21e-01 95.3% 35.7%
3485317 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 48.0 2.92e-01 100.0% 24.8%
5044447 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.54 47.0 3.04e-01 96.5% 27.3%
3717506 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 47.0 3.16e-01 100.0% 36.4%
3193239 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.53 46.0 2.99e-01 100.0% 44.9%
3212508 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.53 46.0 2.96e-01 100.0% 29.8%
3924241 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 48.0 2.82e-01 100.0% 17.0%
None 0.53 47.0 2.98e-01 100.0% 28.8%
3616618 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 48.0 3.13e-01 100.0% 33.9%
3969359 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.53 44.0 3.15e-01 95.3% 88.5%
3447223 5.1.5.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NOL10_N 0.53 48.0 3.12e-01 100.0% 28.2%
3598349 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 46.0 3.03e-01 97.7% 34.7%
3480502 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 45.0 2.74e-01 94.2% 70.8%
3820070 5.1.2.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › FBA_1 0.53 42.0 3.11e-01 93.0% 32.9%
3742689 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.53 47.0 3.18e-01 98.8% 34.0%
None 0.53 46.0 2.91e-01 95.3% 24.4%
3408563 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.53 47.0 3.23e-01 98.8% 34.7%
3968451 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.52 44.0 3.13e-01 94.2% 82.3%
4030008 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 47.0 3.19e-01 100.0% 40.3%
3240086 5.1.5.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NOL10_N 0.52 47.0 3.09e-01 100.0% 28.2%
3545968 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 45.0 2.57e-01 100.0% 11.3%
4001109 5.1.4.55 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ELYS-bb 0.52 45.0 2.78e-01 95.3% 32.8%
4942109 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.52 45.0 3.85e-01 96.5% 72.9%
3276895 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 46.0 2.98e-01 100.0% 36.9%
3767058 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 3.06e-01 98.8% 31.3%
3546198 5.1.4.149 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 0.52 46.0 3.13e-01 100.0% 36.8%
5046585 66.1.1.0 beta sandwiches › ISP domain › ISP domain › ISP domain 0.52 37.0 4.17e-01 73.3% 100.0%
3374974 5.1.3.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.52 46.0 3.36e-01 96.5% 49.3%
3847020 5.1.5.75 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.51 46.0 3.06e-01 100.0% 29.9%
3560257 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.51 47.0 3.07e-01 100.0% 29.9%
4937958 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.51 46.0 3.10e-01 100.0% 68.3%
4889001 5.1.4.280 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st 0.51 46.0 3.07e-01 98.8% 35.8%
4011082 5.1.4.514 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ 0.51 45.0 2.78e-01 100.0% 25.5%
3634343 5.1.5.93 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.51 46.0 2.86e-01 100.0% 19.8%
3904573 5.1.5.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N 0.51 44.0 2.96e-01 98.8% 30.6%
3445272 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 45.0 2.98e-01 98.8% 30.1%
5043414 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.50 41.0 3.68e-01 95.3% 94.8%
3592256 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 45.0 2.92e-01 100.0% 30.9%
3404226 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 44.0 3.00e-01 97.7% 34.9%
3261797 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 44.0 2.92e-01 98.8% 34.8%