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MW862982.1__QWY81972.1__SEA_SICARIUS2_67__00067

Bact-Vir

MW862982.1__QWY81972.1__SEA_SICARIUS2_67__00067

Identity

Accession:
MW862982 ↗
Kingdom:
phage

Quality

66.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Berryhillviridae› Sicariusvirus› Arthrobacter_phage_Sicarius2

TaxID: 2836090

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-157
PDB
Domain cluster: rep: OR420741.1__WOZ55670.1__CRP118_gp39__00039__D1-140
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cshA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.84 71.0 6.98e-01 88.3% 100.0%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.82 68.0 5.95e-01 85.7% 72.3%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.73 60.0 5.31e-01 86.4% 83.6%
4fdyA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.71 56.0 6.00e-01 99.4% 94.0%
3zleA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.70 21.0 3.88e-01 70.8% 100.0%
2btwA00 3.90.70.30 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain 0.69 55.0 4.99e-01 84.4% 89.5%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 29.0 4.15e-01 84.4% 85.3%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 47.0 5.07e-01 73.4% 95.4%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 57.0 5.38e-01 94.2% 95.1%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 28.0 4.25e-01 98.1% 100.0%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 28.0 4.18e-01 84.4% 100.0%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 46.0 5.00e-01 77.9% 100.0%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 29.0 4.04e-01 85.1% 93.3%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 41.0 3.35e-01 77.3% 99.3%
1b12C01 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.55 39.0 4.38e-01 80.5% 92.6%
2rhiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 32.0 3.70e-01 70.1% 79.5%
4kktA01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.52 21.0 2.62e-01 79.2% 55.2%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.50 23.0 3.07e-01 82.5% 79.5%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3979552 219.1.1.90 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF1287 0.74 61.0 5.82e-01 86.4% 98.3%
3591737 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.72 59.0 5.62e-01 86.4% 95.5%
4938445 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.70 40.0 4.30e-01 71.4% 63.7%
3176702 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.69 58.0 5.79e-01 86.4% 95.5%
3964422 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.69 65.0 6.44e-01 99.4% 98.1%
4956630 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.68 41.0 4.12e-01 71.4% 58.7%
4987744 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.67 40.0 4.30e-01 71.4% 67.4%
3393347 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 36.0 4.55e-01 71.4% 91.1%
3519774 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 36.0 4.23e-01 71.4% 78.1%
3738126 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 35.0 4.39e-01 71.4% 88.9%
3609629 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 35.0 4.36e-01 72.1% 85.3%
5046498 219.1.1.51 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.64 55.0 5.42e-01 92.9% 99.4%
2141735 219.1.1.69 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GtgE 0.63 51.0 4.71e-01 86.4% 96.9%
3997949 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 34.0 4.28e-01 70.8% 90.0%
3790897 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 36.0 4.37e-01 71.4% 89.0%
3195050 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 35.0 4.31e-01 76.0% 94.7%
3575959 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 37.0 4.26e-01 87.7% 88.2%
3244430 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 37.0 4.33e-01 89.0% 94.3%
3840677 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 35.0 4.20e-01 89.6% 93.0%
3787586 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 36.0 4.23e-01 77.3% 92.4%
4565130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 34.0 4.23e-01 74.7% 97.9%
146236 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.56 38.0 4.42e-01 87.0% 100.0%
3665882 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.52 36.0 3.89e-01 70.8% 91.1%
3189199 109.1.1.35 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › PF25907 0.52 30.0 2.45e-01 74.0% 32.5%
D2 medium residues 190-224
PDB