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MW862992.1__QWY82792.1__SEA_SILENTRX_52__00052
Bact-VirMW862992.1__QWY82792.1__SEA_SILENTRX_52__00052
Identity
- Accession:
- MW862992 ↗
- Kingdom:
- phage
Quality
65.2
mean pLDDT
Taxonomy
TaxID: 2836091
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 121-173
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 53.0 | 5.61e-01 | 96.2% | 93.6% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.68 | 56.0 | 4.92e-01 | 94.3% | 87.5% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 51.0 | 4.73e-01 | 100.0% | 66.7% |
| 3j7aF02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.65 | 40.0 | 4.08e-01 | 73.6% | 62.7% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.64 | 54.0 | 4.97e-01 | 98.1% | 98.6% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 52.0 | 3.97e-01 | 100.0% | 39.7% |
| 8adbA01 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.62 | 52.0 | 3.57e-01 | 100.0% | 37.7% |
| 4qiwB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.61 | 52.0 | 3.77e-01 | 100.0% | 91.4% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.60 | 46.0 | 4.80e-01 | 98.1% | 93.8% |
| 1yzbA01 | 3.90.70.40 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.60 | 50.0 | 3.96e-01 | 100.0% | 48.4% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.60 | 49.0 | 3.86e-01 | 100.0% | 41.1% |
| 2l5qA01 | 2.30.30.730 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 45.0 | 4.63e-01 | 98.1% | 94.0% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.59 | 50.0 | 3.16e-01 | 100.0% | 86.9% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 43.0 | 4.44e-01 | 98.1% | 92.0% |
| 1e3hA01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.57 | 47.0 | 3.14e-01 | 100.0% | 98.4% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 42.0 | 4.31e-01 | 98.1% | 94.0% |
| 4bpnW02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.55 | 35.0 | 3.55e-01 | 73.6% | 62.7% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 43.0 | 4.11e-01 | 94.3% | 82.5% |
| 2vxtI00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 36.0 | 2.72e-01 | 77.4% | 28.8% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 40.0 | 3.70e-01 | 98.1% | 74.7% |
| 1zc6A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 34.0 | 2.53e-01 | 71.7% | 33.3% |
| 1s3aA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 38.0 | 3.37e-01 | 86.8% | 81.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4620172 | 11.9.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase | 0.67 | 58.0 | 3.63e-01 | 100.0% | 66.6% |
| 4178962 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.67 | 52.0 | 4.55e-01 | 88.7% | 89.4% |
| 1606334 | 4.10.1.0 ↗ | beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain | 0.63 | 53.0 | 4.92e-01 | 100.0% | 97.2% |
| 2579116 | 2.1.1.9 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e | 0.63 | 40.0 | 3.82e-01 | 73.6% | 54.8% |
| 3834747 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.61 | 47.0 | 4.38e-01 | 100.0% | 65.7% |
| 3222223 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 41.0 | 3.87e-01 | 75.5% | 56.9% |
| 3347504 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.61 | 49.0 | 4.62e-01 | 96.2% | 81.4% |
| 5030430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 46.0 | 4.45e-01 | 96.2% | 73.8% |
| 5036647 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.59 | 47.0 | 4.41e-01 | 98.1% | 71.4% |
| 4952887 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 48.0 | 4.76e-01 | 100.0% | 90.9% |
| 2697704 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.59 | 44.0 | 4.24e-01 | 96.2% | 70.8% |
| 3839083 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.59 | 46.0 | 4.32e-01 | 100.0% | 68.6% |
| 4287411 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.59 | 47.0 | 4.29e-01 | 100.0% | 65.0% |
| 5058270 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.59 | 45.0 | 4.39e-01 | 94.3% | 78.3% |
| 3230584 | 2.1.1.318 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF7037 | 0.59 | 39.0 | 3.98e-01 | 81.1% | 72.0% |
| 2491409 | 219.1.1.117 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF30660 | 0.58 | 49.0 | 3.51e-01 | 100.0% | 35.8% |
| 4981300 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.58 | 45.0 | 4.31e-01 | 96.2% | 73.8% |
| 3971219 | 11.9.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase | 0.58 | 49.0 | 3.23e-01 | 100.0% | 62.8% |
| 3961546 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.58 | 45.0 | 4.30e-01 | 98.1% | 75.4% |
| 4952854 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.58 | 43.0 | 4.16e-01 | 94.3% | 72.3% |
| 3947085 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.57 | 44.0 | 4.18e-01 | 96.2% | 70.0% |
| 5029186 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.57 | 45.0 | 4.28e-01 | 98.1% | 75.4% |
| 5028692 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.57 | 43.0 | 4.13e-01 | 94.3% | 72.3% |
| 4959192 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.57 | 44.0 | 4.20e-01 | 98.1% | 73.8% |
| 4955296 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.56 | 43.0 | 4.16e-01 | 98.1% | 73.8% |
| 3601162 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 44.0 | 4.16e-01 | 94.3% | 73.8% |
| 3956333 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 40.0 | 3.19e-01 | 100.0% | 35.4% |
| 3912111 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.53 | 42.0 | 3.35e-01 | 86.8% | 57.4% |
D2
medium
residues 4-116