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MW862992.1__QWY82796.1__SEA_SILENTRX_56__00056
Bact-VirMW862992.1__QWY82796.1__SEA_SILENTRX_56__00056
Identity
- Accession:
- MW862992 ↗
- Kingdom:
- phage
Quality
64.0
mean pLDDT
Taxonomy
TaxID: 2836091
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-85
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.76 | 60.0 | 5.93e-01 | 90.6% | 81.8% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 34.0 | 3.04e-01 | 83.0% | 32.9% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 43.0 | 3.60e-01 | 100.0% | 40.2% |
| 1w4rA02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.62 | 44.0 | 4.87e-01 | 75.5% | 100.0% |
| 2kumA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 42.0 | 4.12e-01 | 100.0% | 73.7% |
| 2innB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.57 | 43.0 | 2.49e-01 | 83.0% | 9.7% |
| 4fshA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.55 | 46.0 | 3.55e-01 | 98.1% | 43.1% |
| 4hv0C00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.54 | 35.0 | 3.02e-01 | 98.1% | 39.3% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285436 | 3380.1.1.0 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 | 0.85 | 61.0 | 5.81e-01 | 86.8% | 66.7% |
| 3549240 | 5.1.4.253 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_Gbeta | 0.76 | 52.0 | 3.09e-01 | 88.7% | 9.9% |
| 3670643 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.76 | 53.0 | 6.03e-01 | 84.9% | 97.5% |
| 5013172 | 375.1.5.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein Ta0289-C | 0.72 | 46.0 | 5.38e-01 | 81.1% | 100.0% |
| 5013313 | 377.1.3.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.72 | 46.0 | 5.39e-01 | 75.5% | 100.0% |
| 3540261 | 376.1.2.28 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-FCS | 0.71 | 57.0 | 5.65e-01 | 98.1% | 87.3% |
| 4977157 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 51.0 | 5.45e-01 | 84.9% | 91.1% |
| 4670436 | 375.1.1.284 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF27208 | 0.70 | 50.0 | 5.54e-01 | 83.0% | 100.0% |
| 3960493 | 1001.1.1.0 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 | 0.70 | 42.0 | 3.16e-01 | 98.1% | 24.8% |
| 4990784 | 375.1.1.323 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Arc_trans_TRASH | 0.70 | 45.0 | 5.21e-01 | 75.5% | 100.0% |
| 3566304 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.69 | 49.0 | 5.53e-01 | 86.8% | 100.0% |
| 4935807 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 44.0 | 5.02e-01 | 77.4% | 100.0% |
| 3494052 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.69 | 48.0 | 5.15e-01 | 83.0% | 86.7% |
| 3762289 | 386.1.1.106 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-FCS | 0.67 | 47.0 | 5.14e-01 | 83.0% | 100.0% |
| 3537096 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.67 | 47.0 | 5.13e-01 | 83.0% | 100.0% |
| 5000482 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 43.0 | 4.95e-01 | 77.4% | 100.0% |
| 3528204 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.67 | 47.0 | 5.13e-01 | 83.0% | 100.0% |
| 4959095 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.66 | 42.0 | 4.62e-01 | 75.5% | 85.0% |
| 3878133 | 375.1.1.265 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-FCS | 0.66 | 46.0 | 5.05e-01 | 83.0% | 100.0% |
| 3541606 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.65 | 46.0 | 4.98e-01 | 83.0% | 100.0% |
| 3264583 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 42.0 | 4.71e-01 | 75.5% | 100.0% |
| 3416712 | 377.9.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like | 0.65 | 45.0 | 4.87e-01 | 81.1% | 97.5% |
| 3493960 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.63 | 53.0 | 4.97e-01 | 94.3% | 80.0% |
| 5031930 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.63 | 44.0 | 4.90e-01 | 79.2% | 100.0% |
| 3908093 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.62 | 47.0 | 4.91e-01 | 88.7% | 97.8% |
| 5011221 | 377.1.1.126 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH | 0.62 | 43.0 | 4.75e-01 | 83.0% | 97.5% |
| 3394477 | 377.9.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like | 0.62 | 49.0 | 4.80e-01 | 100.0% | 80.0% |
| 3541609 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.62 | 44.0 | 4.73e-01 | 88.7% | 100.0% |
| 3772431 | 3380.1.1.3 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › zf-FCS | 0.62 | 44.0 | 4.74e-01 | 84.9% | 100.0% |
| 3566649 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.61 | 45.0 | 4.77e-01 | 88.7% | 97.8% |
| 4562058 | 377.1.1.31 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS | 0.61 | 44.0 | 4.70e-01 | 79.2% | 91.1% |
| 3483723 | 1155.1.1.1 ↗ | few secondary structure elements › Shisa 3 N-terminal domain › Shisa 3 N-terminal domain › Shisa 3 N-terminal domain › Shisa_N | 0.59 | 40.0 | 4.09e-01 | 83.0% | 74.0% |
| 5041082 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.59 | 43.0 | 4.46e-01 | 86.8% | 86.0% |
| 3994024 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 45.0 | 4.16e-01 | 88.7% | 64.3% |
| 3938801 | 384.1.1.0 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like | 0.58 | 38.0 | 3.80e-01 | 98.1% | 65.5% |
| 3688034 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.58 | 44.0 | 3.64e-01 | 84.9% | 56.0% |
| 3907983 | 377.9.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like | 0.58 | 43.0 | 4.53e-01 | 84.9% | 95.6% |
| 3919489 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.57 | 40.0 | 4.31e-01 | 83.0% | 97.5% |
| 3907976 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.57 | 42.0 | 4.46e-01 | 90.6% | 97.8% |
| 4926891 | 377.1.1.126 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH | 0.57 | 42.0 | 4.37e-01 | 88.7% | 95.6% |
| 3526185 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.57 | 42.0 | 4.37e-01 | 92.5% | 97.8% |
| 185477 | 4255.1.1.1 ↗ | few secondary structure elements › E6 C-terminal domain-like › E6 C-terminal domain-like › E6 C-terminal domain-like › E6 | 0.56 | 50.0 | 4.64e-01 | 100.0% | 86.6% |
| 4986110 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.56 | 38.0 | 3.33e-01 | 98.1% | 47.5% |
| 3878134 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.56 | 42.0 | 4.23e-01 | 84.9% | 85.5% |
| 4981099 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.54 | 37.0 | 3.93e-01 | 77.4% | 97.5% |
| 4669982 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.53 | 37.0 | 3.85e-01 | 77.4% | 82.0% |
| 4957710 | 377.1.1.31 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS | 0.53 | 40.0 | 4.20e-01 | 86.8% | 100.0% |
| 3574689 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.52 | 39.0 | 2.38e-01 | 79.2% | 21.8% |
| 5047375 | 377.1.1.31 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS | 0.52 | 39.0 | 3.89e-01 | 83.0% | 80.0% |
| 5021368 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.51 | 38.0 | 2.36e-01 | 81.1% | 19.1% |