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MW865293.1__QZI86218.1__PODOV043v1_10006__00006
Bact-VirMW865293.1__QZI86218.1__PODOV043v1_10006__00006
Identity
- Accession:
- MW865293 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-119
Domain cluster:
rep: MW057859.1__QPB12512.1__X__00047__D5-103
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06894.19 best | Phage_TAC_2 | 56.2 | 5.70e-15 | 100.0% | 83.2% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w27A02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.70 | 55.0 | 3.89e-01 | 82.3% | 88.0% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 37.0 | 4.64e-01 | 83.2% | 88.7% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.66 | 46.0 | 4.36e-01 | 70.8% | 77.7% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.65 | 31.0 | 3.27e-01 | 80.5% | 48.1% |
| 4nrjB01 | 3.90.20.10 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › | 0.63 | 44.0 | 3.92e-01 | 71.7% | 68.3% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.63 | 49.0 | 3.80e-01 | 82.3% | 62.8% |
| 1avoB00 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.62 | 44.0 | 4.07e-01 | 72.6% | 77.9% |
| 2q7rB00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.60 | 46.0 | 4.19e-01 | 78.8% | 85.7% |
| 3lxuX03 | 6.10.250.3080 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 33.0 | 4.13e-01 | 81.4% | 95.2% |
| 1v9vA01 | 1.20.1480.20 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like | 0.59 | 31.0 | 3.35e-01 | 79.6% | 58.9% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.58 | 44.0 | 3.99e-01 | 79.6% | 81.9% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 24.0 | 3.05e-01 | 73.5% | 69.1% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 38.0 | 3.31e-01 | 74.3% | 91.8% |
| 2xi9A03 | 1.10.150.480 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 34.0 | 3.64e-01 | 87.6% | 71.3% |
| 1ivhA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 39.0 | 3.68e-01 | 79.6% | 61.0% |
| 4bzaA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 30.0 | 3.67e-01 | 85.0% | 91.2% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3975686 | 6050.1.1.2 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_2 | 0.84 | 73.0 | 7.62e-01 | 99.1% | 97.1% |
| 4020894 | 4970.1.1.4 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N | 0.70 | 52.0 | 4.19e-01 | 76.1% | 90.5% |
| 3965726 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.69 | 50.0 | 5.64e-01 | 100.0% | 100.0% |
| 3691737 | 5076.2.1.9 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › Choline_transpo | 0.69 | 57.0 | 3.86e-01 | 89.4% | 57.6% |
| 3584946 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.68 | 53.0 | 4.18e-01 | 84.1% | 73.9% |
| 3407025 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.66 | 51.0 | 3.60e-01 | 81.4% | 63.1% |
| 5048220 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.63 | 54.0 | 4.20e-01 | 98.2% | 95.9% |
| 4268479 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.60 | 48.0 | 3.68e-01 | 88.5% | 46.9% |
| 3267388 | 5076.1.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier | 0.60 | 53.0 | 3.94e-01 | 100.0% | 89.7% |
| 3654189 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.59 | 46.0 | 4.05e-01 | 81.4% | 84.8% |
| 3516714 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.57 | 41.0 | 3.57e-01 | 100.0% | 48.8% |
| 3285528 | 192.29.1.53 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4328 | 0.57 | 43.0 | 3.64e-01 | 80.5% | 96.9% |
| 3643155 | 603.1.1.2 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Not3 | 0.57 | 35.0 | 3.45e-01 | 86.7% | 56.7% |
| 3737830 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.55 | 44.0 | 3.39e-01 | 88.5% | 79.6% |
| 3709548 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 33.0 | 3.21e-01 | 70.8% | 52.3% |
| 3257654 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 41.0 | 4.03e-01 | 81.4% | 92.0% |
| 3433598 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.53 | 39.0 | 3.70e-01 | 77.9% | 71.4% |
| 3814947 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.52 | 43.0 | 3.65e-01 | 88.5% | 81.1% |
| 3426161 | 601.1.2.74 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Rx_N | 0.52 | 37.0 | 3.59e-01 | 73.5% | 100.0% |
| 3730506 | 3924.1.1.0 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 | 0.52 | 33.0 | 2.80e-01 | 73.5% | 37.4% |
| 3355123 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 36.0 | 3.32e-01 | 80.5% | 55.0% |
| 4018701 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.51 | 43.0 | 3.17e-01 | 92.9% | 86.8% |
| 4030382 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.51 | 39.0 | 3.24e-01 | 82.3% | 56.2% |
| 3595119 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.51 | 44.0 | 3.22e-01 | 100.0% | 90.4% |