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MW865296.1__QZI86234.1__PODOV043v1_50001__00001

Bact-Vir

MW865296.1__QZI86234.1__PODOV043v1_50001__00001

Identity

Accession:
MW865296 ↗
Kingdom:
phage

Quality

88.8 mean pLDDT

Taxonomy

TaxID: 2859292

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-149
PDB
D2 high residues 154-212
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18090.7 best SoPB_HTH 39.9 5.40e-10 100.0% 81.3%
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mkzN00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.97 92.0 7.18e-01 100.0% 57.3%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 57.0 4.97e-01 72.9% 51.1%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 55.0 5.43e-01 71.2% 81.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 55.0 4.95e-01 71.2% 60.0%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 55.0 5.30e-01 71.2% 65.7%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 55.0 4.72e-01 71.2% 48.9%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 56.0 5.62e-01 74.6% 75.4%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 55.0 4.79e-01 72.9% 49.4%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 54.0 5.21e-01 71.2% 65.7%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.79 71.0 5.99e-01 100.0% 64.9%
3vwbA00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.78 68.0 5.50e-01 100.0% 52.6%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 50.0 5.44e-01 71.2% 87.5%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 47.0 4.62e-01 93.2% 61.9%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 49.0 4.57e-01 72.9% 59.2%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.46e-01 76.3% 88.5%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 5.27e-01 76.3% 86.0%
2l1pA00 1.10.260.70 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › SATB, CULT domain 0.70 49.0 4.41e-01 96.6% 53.0%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.59e-01 98.3% 84.8%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.55e-01 71.2% 65.2%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 5.01e-01 74.6% 83.6%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 46.0 4.49e-01 96.6% 64.6%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 4.24e-01 71.2% 66.7%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 46.0 4.70e-01 71.2% 76.8%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 45.0 4.29e-01 71.2% 63.9%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 5.03e-01 76.3% 87.0%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.67 53.0 4.12e-01 86.4% 62.7%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 45.0 4.48e-01 94.9% 66.7%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 4.46e-01 71.2% 71.9%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 4.36e-01 71.2% 65.7%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 4.47e-01 71.2% 73.8%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 46.0 4.14e-01 94.9% 53.7%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.10e-01 71.2% 72.0%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.99e-01 76.3% 94.0%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.30e-01 71.2% 68.8%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.90e-01 93.2% 77.3%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 3.83e-01 83.1% 65.6%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 44.0 2.90e-01 72.9% 43.0%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 44.0 4.13e-01 94.9% 59.7%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 53.0 4.69e-01 94.9% 69.4%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 3.92e-01 83.1% 79.6%
4mf9B01 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.57 51.0 3.65e-01 98.3% 81.2%
3rd8A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.55 34.0 3.57e-01 84.7% 66.7%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.55 40.0 3.86e-01 79.7% 85.1%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 4.09e-01 91.5% 97.3%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.37e-01 98.3% 78.3%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1414245 101.1.1.78 alpha arrays › HTH › HTH › Three-helical HTH › SoPB_HTH 0.98 93.0 7.17e-01 100.0% 54.8%
3979277 101.1.1.44 alpha arrays › HTH › HTH › Three-helical HTH › ParB 0.88 79.0 6.12e-01 100.0% 48.8%
3284225 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.85 58.0 5.18e-01 71.2% 55.0%
4370821 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 56.0 4.90e-01 71.2% 50.6%
4970801 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 54.0 4.69e-01 96.6% 47.1%
5031888 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.81 53.0 4.78e-01 96.6% 50.0%
3589664 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 56.0 4.94e-01 72.9% 51.8%
3963064 101.1.1.251 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.81 72.0 6.04e-01 100.0% 62.0%
4862437 101.1.1.198 alpha arrays › HTH › HTH › Three-helical HTH › KorB 0.79 71.0 6.82e-01 100.0% 89.7%
4031672 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 54.0 4.85e-01 71.2% 55.0%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.77 52.0 4.62e-01 71.2% 50.6%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.75 60.0 4.66e-01 84.7% 77.5%
5032172 101.1.1.251 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.75 64.0 5.25e-01 100.0% 51.3%
3407600 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 52.0 5.25e-01 74.6% 75.0%
3932648 101.1.1.195 alpha arrays › HTH › HTH › Three-helical HTH › HTH_5 0.73 50.0 5.14e-01 71.2% 76.4%
5077607 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 50.0 4.97e-01 71.2% 76.7%
4985252 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 49.0 4.79e-01 71.2% 70.8%
3794969 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 49.0 5.21e-01 71.2% 92.0%
4943479 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 49.0 5.26e-01 71.2% 86.0%
4980944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 49.0 4.46e-01 71.2% 56.2%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 49.0 4.74e-01 71.2% 66.2%
5000424 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.71 49.0 4.87e-01 71.2% 73.3%
5022370 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.71 52.0 4.69e-01 78.0% 58.7%
5073261 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.71 48.0 4.59e-01 71.2% 67.1%
5037302 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.71 48.0 4.83e-01 71.2% 71.7%
4957415 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.70 55.0 5.51e-01 86.4% 88.3%
5055912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 47.0 4.53e-01 71.2% 60.0%
3409145 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.70 52.0 5.59e-01 88.1% 92.0%
4047135 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.70 48.0 5.16e-01 71.2% 84.0%
5068679 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.70 47.0 4.90e-01 71.2% 83.6%
5030106 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.70 47.0 4.92e-01 71.2% 85.5%
5072420 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 50.0 5.37e-01 76.3% 94.0%
5055914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 47.0 4.88e-01 71.2% 76.4%
4964807 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.69 49.0 5.10e-01 76.3% 80.0%
4944620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 47.0 4.88e-01 71.2% 76.4%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.69 48.0 5.30e-01 91.5% 95.6%
3959624 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 48.0 5.14e-01 76.3% 86.0%
4947593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 5.06e-01 74.6% 85.5%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.69 53.0 4.49e-01 84.7% 83.0%
5031306 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 46.0 4.79e-01 71.2% 76.4%
5076741 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 49.0 5.32e-01 76.3% 94.0%
3266230 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.68 52.0 5.22e-01 91.5% 81.7%
4943799 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 47.0 5.08e-01 72.9% 86.0%
3164718 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 49.0 4.52e-01 76.3% 64.0%
3767621 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.68 56.0 5.11e-01 93.2% 76.2%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.68 58.0 5.44e-01 100.0% 92.0%
3952144 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 49.0 4.75e-01 76.3% 73.8%
5011763 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 46.0 4.74e-01 71.2% 85.5%
4944981 101.1.2.873 alpha arrays › HTH › HTH › winged helix domain › AsnC_trans_reg 0.67 49.0 5.06e-01 76.3% 83.6%
5045296 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 47.0 4.85e-01 74.6% 80.0%
5062184 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.67 46.0 4.61e-01 71.2% 75.0%
4980888 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 46.0 4.49e-01 71.2% 64.6%
3224978 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.67 54.0 5.19e-01 93.2% 79.4%
5028930 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.67 48.0 4.81e-01 76.3% 76.7%
4449311 101.1.1.61 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AsnC-type 0.67 47.0 5.22e-01 94.9% 97.8%
4928849 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 45.0 4.49e-01 71.2% 76.7%
4143289 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.66 47.0 4.90e-01 76.3% 83.6%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.65 44.0 4.70e-01 71.2% 92.0%
3509240 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.65 54.0 5.26e-01 93.2% 87.7%
5013089 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 4.66e-01 71.2% 86.0%
4978146 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.63 43.0 4.15e-01 71.2% 64.3%
4977346 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 45.0 4.78e-01 76.3% 90.0%
4926890 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.62 50.0 4.28e-01 86.4% 97.8%
5047812 101.29.1.0 alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like 0.62 44.0 4.38e-01 76.3% 83.3%
3476699 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.61 49.0 4.37e-01 88.1% 63.5%
4979728 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 4.23e-01 86.4% 77.6%
5077990 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.59 46.0 4.05e-01 86.4% 74.4%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.58 46.0 4.63e-01 91.5% 88.3%
5078923 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.58 46.0 3.85e-01 86.4% 61.0%